RNA–Protein interactions for RNA: ENST00000541960.5

GABARAPL1-210, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 3

Gene GABARAPL1, Length 3,214 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-210ENST00000541960 BTBD11A6QL63 1104 aa22.25■■□□□ 1.15
GABARAPL1-210ENST00000541960 ANP32AP39687 249 aaKnown RBP22.25■■□□□ 1.15
GABARAPL1-210ENST00000541960 ADAMTS7Q9UKP4 1686 aa22.25■■□□□ 1.15
GABARAPL1-210ENST00000541960 RAPGEF4Q8WZA2 1011 aa22.25■■□□□ 1.15
GABARAPL1-210ENST00000541960 FLIIQ13045 1269 aa22.24■■□□□ 1.15
GABARAPL1-210ENST00000541960 HDGFL1Q5TGJ6 251 aa22.23■■□□□ 1.15
GABARAPL1-210ENST00000541960 NUCB1Q02818 461 aa22.22■■□□□ 1.15
GABARAPL1-210ENST00000541960 MEIS3Q99687 375 aa22.22■■□□□ 1.15
GABARAPL1-210ENST00000541960 NHSL1Q5SYE7 1610 aa22.22■■□□□ 1.15
GABARAPL1-210ENST00000541960 SIPA1L3O60292 1781 aaPredicted RBP22.22■■□□□ 1.15
GABARAPL1-210ENST00000541960 TATP17735 454 aaPredicted RBP22.22■■□□□ 1.15
GABARAPL1-210ENST00000541960 ATP10DQ9P241 1426 aa22.22■■□□□ 1.15
GABARAPL1-210ENST00000541960 ABCA3Q99758 1704 aa22.22■■□□□ 1.15
GABARAPL1-210ENST00000541960 KDM6AO15550 1401 aaPredicted RBP22.21■■□□□ 1.15
GABARAPL1-210ENST00000541960 SLC4A10Q6U841 1118 aa22.21■■□□□ 1.15
GABARAPL1-210ENST00000541960 PRDM11Q9NQV5 511 aa22.21■■□□□ 1.15
GABARAPL1-210ENST00000541960 IPO9Q96P70 1041 aaKnown RBP22.2■■□□□ 1.14
GABARAPL1-210ENST00000541960 PHKG2P15735 406 aa22.19■■□□□ 1.14
GABARAPL1-210ENST00000541960 FKBP5Q13451 457 aaPredicted RBP22.19■■□□□ 1.14
GABARAPL1-210ENST00000541960 EIF2S2P20042 333 aaKnown RBP22.19■■□□□ 1.14
GABARAPL1-210ENST00000541960 PHAXQ9H814 394 aaKnown RBP22.19■■□□□ 1.14
GABARAPL1-210ENST00000541960 CACNA1FO60840 1977 aa22.19■■□□□ 1.14
GABARAPL1-210ENST00000541960 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.18■■□□□ 1.14
GABARAPL1-210ENST00000541960 HOXB7P09629 217 aa22.18■■□□□ 1.14
GABARAPL1-210ENST00000541960 LNPKQ9C0E8 428 aa22.18■■□□□ 1.14
GABARAPL1-210ENST00000541960 HEG1Q9ULI3 1381 aa22.18■■□□□ 1.14
GABARAPL1-210ENST00000541960 SPG7Q9UQ90 795 aa22.18■■□□□ 1.14
GABARAPL1-210ENST00000541960 SEC24BO95487 1268 aa22.17■■□□□ 1.14
GABARAPL1-210ENST00000541960 CCT4P50991 539 aaKnown RBP22.17■■□□□ 1.14
GABARAPL1-210ENST00000541960 CHD1LQ86WJ1 897 aa22.17■■□□□ 1.14
GABARAPL1-210ENST00000541960 GCC1Q96CN9 775 aa22.17■■□□□ 1.14
GABARAPL1-210ENST00000541960 CYP27B1O15528 508 aa22.17■■□□□ 1.14
GABARAPL1-210ENST00000541960 COL5A2P05997 1499 aaPredicted RBP22.17■■□□□ 1.14
GABARAPL1-210ENST00000541960 CEP85Q6P2H3 762 aa22.16■■□□□ 1.14
GABARAPL1-210ENST00000541960 CHPF2Q9P2E5 772 aa22.16■■□□□ 1.14
GABARAPL1-210ENST00000541960 SCN11AQ9UI33 1791 aa22.16■■□□□ 1.14
GABARAPL1-210ENST00000541960 PKD1L3Q7Z443 1732 aa22.16■■□□□ 1.14
GABARAPL1-210ENST00000541960 WDR17Q8IZU2 1322 aa22.16■■□□□ 1.14
GABARAPL1-210ENST00000541960 PRAMEF22A3QJZ6 481 aa22.16■■□□□ 1.14
GABARAPL1-210ENST00000541960 ANKRD44Q8N8A2 993 aa22.16■■□□□ 1.14
GABARAPL1-210ENST00000541960 GIGYF1O75420 1035 aaPredicted RBP22.14■■□□□ 1.14
GABARAPL1-210ENST00000541960 ANKRD45Q5TZF3 282 aa22.14■■□□□ 1.14
GABARAPL1-210ENST00000541960 IFNL2Q8IZJ0 200 aa22.14■■□□□ 1.13
GABARAPL1-210ENST00000541960 SLC52A2Q9HAB3 445 aa22.14■■□□□ 1.13
GABARAPL1-210ENST00000541960 ANXA1P04083 346 aa22.14■■□□□ 1.13
GABARAPL1-210ENST00000541960 PLEKHG2Q9H7P9 1386 aa22.14■■□□□ 1.13
GABARAPL1-210ENST00000541960 SLC39A6Q13433 755 aa22.12■■□□□ 1.13
GABARAPL1-210ENST00000541960 NFATC2IPQ8NCF5 419 aa22.12■■□□□ 1.13
GABARAPL1-210ENST00000541960 DCTPP1Q9H773 170 aa22.12■■□□□ 1.13
GABARAPL1-210ENST00000541960 TOM1L2Q6ZVM7 507 aa22.12■■□□□ 1.13
GABARAPL1-210ENST00000541960 RPAP2Q8IXW5 612 aaPredicted RBP22.12■■□□□ 1.13
GABARAPL1-210ENST00000541960 N4BP2Q86UW6 1770 aaPredicted RBP22.11■■□□□ 1.13
GABARAPL1-210ENST00000541960 PXDNLA1KZ92 1463 aa22.11■■□□□ 1.13
GABARAPL1-210ENST00000541960 MRC1P22897 1456 aa22.1■■□□□ 1.13
GABARAPL1-210ENST00000541960 PROSER3Q2NL68 480 aa22.1■■□□□ 1.13
GABARAPL1-210ENST00000541960 ZNF790Q6PG37 636 aa22.1■■□□□ 1.13
GABARAPL1-210ENST00000541960 NOP58Q9Y2X3 529 aaKnown RBP22.1■■□□□ 1.13
GABARAPL1-210ENST00000541960 DCAF5Q96JK2 942 aa22.09■■□□□ 1.13
GABARAPL1-210ENST00000541960 LARP1Q6PKG0 1096 aaKnown RBP22.08■■□□□ 1.13
GABARAPL1-210ENST00000541960 ROBO1Q9Y6N7 1651 aa22.08■■□□□ 1.13
GABARAPL1-210ENST00000541960 STRN4Q9NRL3 753 aa22.08■■□□□ 1.12
GABARAPL1-210ENST00000541960 LTBP4Q8N2S1 1624 aa22.07■■□□□ 1.12
GABARAPL1-210ENST00000541960 PARP4Q9UKK3 1724 aaKnown RBP22.07■■□□□ 1.12
GABARAPL1-210ENST00000541960 DBF4Q9UBU7 674 aaPredicted RBP22.06■■□□□ 1.12
GABARAPL1-210ENST00000541960 ADCY9O60503 1353 aa22.06■■□□□ 1.12
GABARAPL1-210ENST00000541960 GNAI2P04899 355 aa22.06■■□□□ 1.12
GABARAPL1-210ENST00000541960 CARD10Q9BWT7 1032 aa22.06■■□□□ 1.12
GABARAPL1-210ENST00000541960 USP44Q9H0E7 712 aa22.06■■□□□ 1.12
GABARAPL1-210ENST00000541960 PI4KAP2A4QPH2 592 aa22.06■■□□□ 1.12
GABARAPL1-210ENST00000541960 PI4KAP1Q8N8J0 262 aa22.06■■□□□ 1.12
GABARAPL1-210ENST00000541960 C5P01031 1676 aa22.06■■□□□ 1.12
GABARAPL1-210ENST00000541960 CHMP4AQ9BY43 222 aa22.05■■□□□ 1.12
GABARAPL1-210ENST00000541960 ZBTB47Q9UFB7 747 aaPredicted RBP22.04■■□□□ 1.12
GABARAPL1-210ENST00000541960 ZCRB1Q8TBF4 217 aaKnown RBP22.04■■□□□ 1.12
GABARAPL1-210ENST00000541960 ZNF496Q96IT1 587 aaPredicted RBP22.04■■□□□ 1.12
GABARAPL1-210ENST00000541960 GNAI3P08754 354 aa22.03■■□□□ 1.12
GABARAPL1-210ENST00000541960 PDIA6Q15084 440 aa22.03■■□□□ 1.12
GABARAPL1-210ENST00000541960 BEND3Q5T5X7 828 aa22.03■■□□□ 1.12
GABARAPL1-210ENST00000541960 DNAAF4Q8WXU2 420 aa22.03■■□□□ 1.12
GABARAPL1-210ENST00000541960 HSP90AB1P08238 724 aaKnown RBP22.02■■□□□ 1.12
GABARAPL1-210ENST00000541960 PCDH11XQ9BZA7 1347 aa22.02■■□□□ 1.12
GABARAPL1-210ENST00000541960 PCDH11YQ9BZA8 1340 aa22.02■■□□□ 1.12
GABARAPL1-210ENST00000541960 AHDC1Q5TGY3 1603 aaPredicted RBP22.02■■□□□ 1.12
GABARAPL1-210ENST00000541960 IL2RBP14784 551 aa22.02■■□□□ 1.12
GABARAPL1-210ENST00000541960 SRCIN1Q9C0H9 1055 aa22.02■■□□□ 1.12
GABARAPL1-210ENST00000541960 LRRFIP2Q9Y608 721 aaKnown RBP22.02■■□□□ 1.12
GABARAPL1-210ENST00000541960 EVA1CP58658 441 aa22.01■■□□□ 1.11
GABARAPL1-210ENST00000541960 C16orf71Q8IYS4 520 aaPredicted RBP22.01■■□□□ 1.11
GABARAPL1-210ENST00000541960 SHANK3Q9BYB0 1731 aa22.01■■□□□ 1.11
GABARAPL1-210ENST00000541960 PNMA6EA0A0J9YXQ4 647 aa22.01■■□□□ 1.11
GABARAPL1-210ENST00000541960 SMARCA5O60264 1052 aaPredicted RBP22■■□□□ 1.11
GABARAPL1-210ENST00000541960 CABP4P57796 275 aa22■■□□□ 1.11
GABARAPL1-210ENST00000541960 BMP2KLQ5H9B9 411 aa22■■□□□ 1.11
GABARAPL1-210ENST00000541960 GLI3P10071 1580 aa21.99■■□□□ 1.11
GABARAPL1-210ENST00000541960 APBB1O00213 710 aa21.99■■□□□ 1.11
GABARAPL1-210ENST00000541960 ERICH6Q7L0X2 663 aa21.99■■□□□ 1.11
GABARAPL1-210ENST00000541960 PLEKHM2Q8IWE5 1019 aa21.99■■□□□ 1.11
GABARAPL1-210ENST00000541960 OTUD7AQ8TE49 926 aaPredicted RBP21.99■■□□□ 1.11
GABARAPL1-210ENST00000541960 ANP32EQ9BTT0 268 aa21.99■■□□□ 1.11
GABARAPL1-210ENST00000541960 BTG4Q9NY30 223 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms