RNA–Protein interactions for RNA: ENST00000541774.5

ERBB2-204, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-204ENST00000541774 SAMD9Q5K651 1589 aa12.94□□□□□ -0.34
ERBB2-204ENST00000541774 ERCC6L2Q5T890 1561 aa12.94□□□□□ -0.34
ERBB2-204ENST00000541774 SERPINC1P01008 464 aa12.94□□□□□ -0.34
ERBB2-204ENST00000541774 KDM4AO75164 1064 aa12.94□□□□□ -0.34
ERBB2-204ENST00000541774 PDCP20941 246 aa12.94□□□□□ -0.34
ERBB2-204ENST00000541774 CEP57Q86XR8 500 aa12.94□□□□□ -0.34
ERBB2-204ENST00000541774 PAIP2Q9BPZ3 127 aaKnown RBP12.94□□□□□ -0.34
ERBB2-204ENST00000541774 PCDHB15Q9Y5E8 787 aa12.94□□□□□ -0.34
ERBB2-204ENST00000541774 SRRTQ9BXP5 876 aaKnown RBP12.94□□□□□ -0.34
ERBB2-204ENST00000541774 VPS18Q9P253 973 aa12.94□□□□□ -0.34
ERBB2-204ENST00000541774 JRKLQ9Y4A0 524 aa12.94□□□□□ -0.34
ERBB2-204ENST00000541774 HNRNPH2P55795 449 aaKnown RBP12.93□□□□□ -0.34
ERBB2-204ENST00000541774 EXOSC9Q06265 439 aaKnown RBP12.93□□□□□ -0.34
ERBB2-204ENST00000541774 ICE2Q659A1 982 aa12.93□□□□□ -0.34
ERBB2-204ENST00000541774 CCDC9Q9Y3X0 531 aaKnown RBP12.93□□□□□ -0.34
ERBB2-204ENST00000541774 CASTP20810 708 aaKnown RBP12.93□□□□□ -0.34
ERBB2-204ENST00000541774 TERF2Q15554 542 aa12.93□□□□□ -0.34
ERBB2-204ENST00000541774 E2F4Q16254 413 aa12.93□□□□□ -0.34
ERBB2-204ENST00000541774 CEP57L1Q8IYX8 460 aa12.93□□□□□ -0.34
ERBB2-204ENST00000541774 ZBTB12Q9Y330 459 aaPredicted RBP12.93□□□□□ -0.34
ERBB2-204ENST00000541774 MEX3CQ5U5Q3 659 aaKnown RBP12.93□□□□□ -0.34
ERBB2-204ENST00000541774 ATF7IPQ6VMQ6 1270 aa12.93□□□□□ -0.34
ERBB2-204ENST00000541774 HOMEZQ8IX15 550 aa12.93□□□□□ -0.34
ERBB2-204ENST00000541774 API5Q9BZZ5 524 aaKnown RBP12.93□□□□□ -0.34
ERBB2-204ENST00000541774 ZSWIM4Q9H7M6 989 aa12.93□□□□□ -0.34
ERBB2-204ENST00000541774 NOB1Q9ULX3 412 aaKnown RBP12.93□□□□□ -0.34
ERBB2-204ENST00000541774 ZNF165P49910 485 aa12.92□□□□□ -0.34
ERBB2-204ENST00000541774 UPF3BQ9BZI7 483 aaKnown RBP12.92□□□□□ -0.34
ERBB2-204ENST00000541774 TBC1D9Q6ZT07 1266 aa12.92□□□□□ -0.34
ERBB2-204ENST00000541774 CFAP43Q8NDM7 1665 aa12.92□□□□□ -0.34
ERBB2-204ENST00000541774 HMOX1P09601 288 aa12.92□□□□□ -0.34
ERBB2-204ENST00000541774 JARID2Q92833 1246 aaPredicted RBP12.92□□□□□ -0.34
ERBB2-204ENST00000541774 CABP1Q9NZU7 370 aa12.92□□□□□ -0.34
ERBB2-204ENST00000541774 NEBLO76041 1014 aa12.92□□□□□ -0.34
ERBB2-204ENST00000541774 MTHFSP49914 203 aa12.92□□□□□ -0.34
ERBB2-204ENST00000541774 SPATA32Q96LK8 384 aa12.92□□□□□ -0.34
ERBB2-204ENST00000541774 DNAI1Q9UI46 699 aa12.92□□□□□ -0.34
ERBB2-204ENST00000541774 PHACTR2O75167 634 aa12.91□□□□□ -0.34
ERBB2-204ENST00000541774 PPP2R5AQ15172 486 aa12.91□□□□□ -0.34
ERBB2-204ENST00000541774 LARP1BQ659C4 914 aaKnown RBP12.91□□□□□ -0.34
ERBB2-204ENST00000541774 RUFY2Q8WXA3 655 aa12.91□□□□□ -0.34
ERBB2-204ENST00000541774 STK31Q9BXU1 1019 aa12.91□□□□□ -0.34
ERBB2-204ENST00000541774 MX1P20591 662 aa12.91□□□□□ -0.34
ERBB2-204ENST00000541774 RPRD2Q5VT52 1461 aaKnown RBP12.91□□□□□ -0.34
ERBB2-204ENST00000541774 TULP1O00294 542 aaPredicted RBP12.91□□□□□ -0.34
ERBB2-204ENST00000541774 EBAG9O00559 213 aa12.91□□□□□ -0.34
ERBB2-204ENST00000541774 FERMT3Q86UX7 667 aa12.91□□□□□ -0.34
ERBB2-204ENST00000541774 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.91□□□□□ -0.34
ERBB2-204ENST00000541774 GPATCH3Q96I76 525 aa12.91□□□□□ -0.34
ERBB2-204ENST00000541774 MYCNP04198 464 aaPredicted RBP12.9□□□□□ -0.34
ERBB2-204ENST00000541774 AMPHP49418 695 aa12.9□□□□□ -0.34
ERBB2-204ENST00000541774 RARSP54136 660 aaKnown RBP12.9□□□□□ -0.34
ERBB2-204ENST00000541774 UBE2HP62256 183 aa12.9□□□□□ -0.34
ERBB2-204ENST00000541774 ZSCAN12O43309 604 aa12.9□□□□□ -0.34
ERBB2-204ENST00000541774 TSR2Q969E8 191 aaKnown RBP12.9□□□□□ -0.34
ERBB2-204ENST00000541774 SLC52A1Q9NWF4 448 aa12.9□□□□□ -0.34
ERBB2-204ENST00000541774 WDR7Q9Y4E6 1490 aa12.9□□□□□ -0.34
ERBB2-204ENST00000541774 GOLGA6L7A0A1B0GV03 622 aa12.9□□□□□ -0.34
ERBB2-204ENST00000541774 NAA25Q14CX7 972 aa12.9□□□□□ -0.34
ERBB2-204ENST00000541774 OLFM4Q6UX06 510 aa12.9□□□□□ -0.34
ERBB2-204ENST00000541774 USP48Q86UV5 1035 aa12.9□□□□□ -0.34
ERBB2-204ENST00000541774 A0A1B0GUA9 196 aa12.89□□□□□ -0.35
ERBB2-204ENST00000541774 FAM200AQ8TCP9 573 aa12.89□□□□□ -0.35
ERBB2-204ENST00000541774 MYO6Q9UM54 1294 aa12.89□□□□□ -0.35
ERBB2-204ENST00000541774 CFAP65Q6ZU64 1925 aaKnown RBP12.89□□□□□ -0.35
ERBB2-204ENST00000541774 DHX29Q7Z478 1369 aaKnown RBP12.89□□□□□ -0.35
ERBB2-204ENST00000541774 EZRP15311 586 aaKnown RBP12.89□□□□□ -0.35
ERBB2-204ENST00000541774 BMP2KLQ5H9B9 411 aa12.89□□□□□ -0.35
ERBB2-204ENST00000541774 MICALCLQ6ZW33 695 aa12.89□□□□□ -0.35
ERBB2-204ENST00000541774 BRMS1Q9HCU9 246 aa12.89□□□□□ -0.35
ERBB2-204ENST00000541774 LMBRD1Q9NUN5 540 aa12.89□□□□□ -0.35
ERBB2-204ENST00000541774 FBLN1P23142 703 aa12.89□□□□□ -0.35
ERBB2-204ENST00000541774 GSDMDP57764 484 aa12.89□□□□□ -0.35
ERBB2-204ENST00000541774 KIAA1328Q86T90 577 aa12.89□□□□□ -0.35
ERBB2-204ENST00000541774 TMEM63CQ9P1W3 806 aa12.89□□□□□ -0.35
ERBB2-204ENST00000541774 PLEKHH1Q9ULM0 1364 aa12.88□□□□□ -0.35
ERBB2-204ENST00000541774 AKAP17AQ02040 695 aaKnown RBP12.88□□□□□ -0.35
ERBB2-204ENST00000541774 CDK19Q9BWU1 502 aa12.88□□□□□ -0.35
ERBB2-204ENST00000541774 DENND4BO75064 1496 aaPredicted RBP12.88□□□□□ -0.35
ERBB2-204ENST00000541774 NKTRP30414 1462 aaKnown RBP12.88□□□□□ -0.35
ERBB2-204ENST00000541774 CSB-PGBD3P0DP91 1061 aa12.87□□□□□ -0.35
ERBB2-204ENST00000541774 KIF4BQ2VIQ3 1234 aa12.87□□□□□ -0.35
ERBB2-204ENST00000541774 ZGPATQ8N5A5 531 aaKnown RBP12.87□□□□□ -0.35
ERBB2-204ENST00000541774 COG3Q96JB2 828 aa12.87□□□□□ -0.35
ERBB2-204ENST00000541774 LIG1P18858 919 aa12.87□□□□□ -0.35
ERBB2-204ENST00000541774 FKBP5Q13451 457 aaPredicted RBP12.87□□□□□ -0.35
ERBB2-204ENST00000541774 TMEM57Q8N5G2 664 aa12.87□□□□□ -0.35
ERBB2-204ENST00000541774 OAS2P29728 719 aaKnown RBP12.87□□□□□ -0.35
ERBB2-204ENST00000541774 SYT10Q6XYQ8 523 aa12.87□□□□□ -0.35
ERBB2-204ENST00000541774 NBPF11Q86T75 865 aa12.87□□□□□ -0.35
ERBB2-204ENST00000541774 ZNF215Q9UL58 517 aaPredicted RBP12.87□□□□□ -0.35
ERBB2-204ENST00000541774 RRP15Q9Y3B9 282 aaKnown RBP12.87□□□□□ -0.35
ERBB2-204ENST00000541774 ABCC2Q92887 1545 aa12.86□□□□□ -0.35
ERBB2-204ENST00000541774 GNG11P61952 73 aa12.86□□□□□ -0.35
ERBB2-204ENST00000541774 CFAP100Q494V2 611 aa12.86□□□□□ -0.35
ERBB2-204ENST00000541774 CCDC172P0C7W6 258 aa12.86□□□□□ -0.35
ERBB2-204ENST00000541774 MAP9Q49MG5 647 aa12.86□□□□□ -0.35
ERBB2-204ENST00000541774 DNAJC21Q5F1R6 531 aaKnown RBP12.86□□□□□ -0.35
ERBB2-204ENST00000541774 OTUD6BQ8N6M0 293 aa12.86□□□□□ -0.35
ERBB2-204ENST00000541774 MYO1CO00159 1063 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms