RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 ATG3Q9NT62 314 aa18.1■□□□□ 0.49
SCARB1-207ENST00000541661 KIF13BQ9NQT8 1826 aa18.09■□□□□ 0.49
SCARB1-207ENST00000541661 KDRP35968 1356 aa18.07■□□□□ 0.48
SCARB1-207ENST00000541661 ERVV-2B6SEH9 535 aa18.07■□□□□ 0.48
SCARB1-207ENST00000541661 CICQ96RK0 1608 aaPredicted RBP18.07■□□□□ 0.48
SCARB1-207ENST00000541661 COL5A3P25940 1745 aaPredicted RBP18.06■□□□□ 0.48
SCARB1-207ENST00000541661 KIAA1551Q9HCM1 1747 aa18.06■□□□□ 0.48
SCARB1-207ENST00000541661 HSP90AB1P08238 724 aaKnown RBP18.05■□□□□ 0.48
SCARB1-207ENST00000541661 MMP10P09238 476 aa18.05■□□□□ 0.48
SCARB1-207ENST00000541661 TRAPPC3LQ5T215 181 aa18.05■□□□□ 0.48
SCARB1-207ENST00000541661 RC3H1Q5TC82 1133 aaKnown RBP18.05■□□□□ 0.48
SCARB1-207ENST00000541661 DCAF5Q96JK2 942 aa18.05■□□□□ 0.48
SCARB1-207ENST00000541661 SLC4A9Q96Q91 983 aa18.05■□□□□ 0.48
SCARB1-207ENST00000541661 TGFB2P61812 414 aa18.04■□□□□ 0.48
SCARB1-207ENST00000541661 NLGN1Q8N2Q7 840 aa18.04■□□□□ 0.48
SCARB1-207ENST00000541661 RTCBQ9Y3I0 505 aaKnown RBP18.04■□□□□ 0.48
SCARB1-207ENST00000541661 HSPA6P17066 643 aa18.03■□□□□ 0.48
SCARB1-207ENST00000541661 ADRA2BP18089 450 aa18.03■□□□□ 0.48
SCARB1-207ENST00000541661 TNNT2P45379 298 aaPredicted RBP18.03■□□□□ 0.48
SCARB1-207ENST00000541661 ZNF526Q8TF50 670 aaPredicted RBP18.03■□□□□ 0.48
SCARB1-207ENST00000541661 WWC3Q9ULE0 1092 aa18.03■□□□□ 0.48
SCARB1-207ENST00000541661 CLSPNQ9HAW4 1339 aa18.02■□□□□ 0.48
SCARB1-207ENST00000541661 PXDNLA1KZ92 1463 aa18.02■□□□□ 0.48
SCARB1-207ENST00000541661 N4BP2Q86UW6 1770 aaPredicted RBP18.02■□□□□ 0.48
SCARB1-207ENST00000541661 PLEKHO1Q53GL0 409 aaPredicted RBP18.02■□□□□ 0.48
SCARB1-207ENST00000541661 ARHGEF1Q92888 912 aaKnown RBP18.02■□□□□ 0.48
SCARB1-207ENST00000541661 CNTNAP4Q9C0A0 1308 aa18.01■□□□□ 0.47
SCARB1-207ENST00000541661 RPS6KA4O75676 772 aa18.01■□□□□ 0.47
SCARB1-207ENST00000541661 AMOTQ4VCS5 1084 aa18.01■□□□□ 0.47
SCARB1-207ENST00000541661 RBM42Q9BTD8 480 aaKnown RBP18.01■□□□□ 0.47
SCARB1-207ENST00000541661 KDM6AO15550 1401 aaPredicted RBP18■□□□□ 0.47
SCARB1-207ENST00000541661 C10orf71Q711Q0 1435 aa18■□□□□ 0.47
SCARB1-207ENST00000541661 GYS1P13807 737 aa18■□□□□ 0.47
SCARB1-207ENST00000541661 IFFO2Q5TF58 517 aa18■□□□□ 0.47
SCARB1-207ENST00000541661 MYH14Q7Z406 1995 aaKnown RBP18■□□□□ 0.47
SCARB1-207ENST00000541661 C4AP0C0L4 1744 aa18■□□□□ 0.47
SCARB1-207ENST00000541661 KIF3CO14782 793 aa17.99■□□□□ 0.47
SCARB1-207ENST00000541661 POLR3GLQ9BT43 218 aa17.99■□□□□ 0.47
SCARB1-207ENST00000541661 BRCA1P38398 1863 aaKnown RBP17.99■□□□□ 0.47
SCARB1-207ENST00000541661 CABP4P57796 275 aa17.98■□□□□ 0.47
SCARB1-207ENST00000541661 ZNF530Q6P9A1 599 aaPredicted RBP17.98■□□□□ 0.47
SCARB1-207ENST00000541661 PANK3Q9H999 370 aa17.98■□□□□ 0.47
SCARB1-207ENST00000541661 A0A0G2JLW4 131 aa17.97■□□□□ 0.47
SCARB1-207ENST00000541661 RFC4P35249 363 aa17.97■□□□□ 0.47
SCARB1-207ENST00000541661 CCDC87Q9NVE4 849 aa17.97■□□□□ 0.47
SCARB1-207ENST00000541661 MTHFSP49914 203 aa17.96■□□□□ 0.47
SCARB1-207ENST00000541661 EIF4G2P78344 907 aaKnown RBP eCLIP17.96■□□□□ 0.472e-9■■■■□ 23.9
SCARB1-207ENST00000541661 BCS1LQ9Y276 419 aa17.96■□□□□ 0.47
SCARB1-207ENST00000541661 PARP3Q9Y6F1 533 aa17.96■□□□□ 0.47
SCARB1-207ENST00000541661 DPEP1P16444 411 aa17.95■□□□□ 0.46
SCARB1-207ENST00000541661 ARFGEF1Q9Y6D6 1849 aa17.95■□□□□ 0.46
SCARB1-207ENST00000541661 HSPA5P11021 654 aaKnown RBP17.94■□□□□ 0.46
SCARB1-207ENST00000541661 C1orf141Q5JVX7 400 aa17.94■□□□□ 0.46
SCARB1-207ENST00000541661 AEBP1Q8IUX7 1158 aa17.94■□□□□ 0.46
SCARB1-207ENST00000541661 NFATC2IPQ8NCF5 419 aa17.94■□□□□ 0.46
SCARB1-207ENST00000541661 SCN11AQ9UI33 1791 aa17.94■□□□□ 0.46
SCARB1-207ENST00000541661 TJP1Q07157 1748 aa17.93■□□□□ 0.46
SCARB1-207ENST00000541661 PTCD1O75127 700 aaKnown RBP17.93■□□□□ 0.46
SCARB1-207ENST00000541661 KCNA3P22001 575 aa17.93■□□□□ 0.46
SCARB1-207ENST00000541661 MORC1Q86VD1 984 aa17.93■□□□□ 0.46
SCARB1-207ENST00000541661 FCHSD2O94868 740 aa17.92■□□□□ 0.46
SCARB1-207ENST00000541661 CRKLP46109 303 aaKnown RBP17.92■□□□□ 0.46
SCARB1-207ENST00000541661 ARHGAP27Q6ZUM4 889 aa17.92■□□□□ 0.46
SCARB1-207ENST00000541661 TOMM70O94826 608 aa17.91■□□□□ 0.46
SCARB1-207ENST00000541661 SULT6B1Q6IMI4 303 aa17.91■□□□□ 0.46
SCARB1-207ENST00000541661 ADAMTS7Q9UKP4 1686 aa17.9■□□□□ 0.46
SCARB1-207ENST00000541661 IL13P35225 146 aa17.9■□□□□ 0.46
SCARB1-207ENST00000541661 PIM2Q9P1W9 311 aa17.9■□□□□ 0.46
SCARB1-207ENST00000541661 USP42Q9H9J4 1324 aaKnown RBP17.9■□□□□ 0.46
SCARB1-207ENST00000541661 APLP1P51693 650 aa17.89■□□□□ 0.45
SCARB1-207ENST00000541661 FKBP8Q14318 412 aa17.89■□□□□ 0.45
SCARB1-207ENST00000541661 INTS5Q6P9B9 1019 aaKnown RBP17.89■□□□□ 0.45
SCARB1-207ENST00000541661 SRP68Q9UHB9 627 aaKnown RBP17.89■□□□□ 0.45
SCARB1-207ENST00000541661 PCGF6Q9BYE7 350 aa17.88■□□□□ 0.45
SCARB1-207ENST00000541661 TM4SF1P30408 202 aa17.87■□□□□ 0.45
SCARB1-207ENST00000541661 DDR1Q08345 913 aa17.87■□□□□ 0.45
SCARB1-207ENST00000541661 AKAP4Q5JQC9 854 aa17.87■□□□□ 0.45
SCARB1-207ENST00000541661 KNSTRNQ9Y448 316 aa17.87■□□□□ 0.45
SCARB1-207ENST00000541661 DALRD3Q5D0E6 543 aaKnown RBP17.86■□□□□ 0.45
SCARB1-207ENST00000541661 C9orf131Q5VYM1 1079 aa17.86■□□□□ 0.45
SCARB1-207ENST00000541661 NMRK2Q9NPI5 230 aa17.86■□□□□ 0.45
SCARB1-207ENST00000541661 VIRMAQ69YN4 1812 aaKnown RBP17.86■□□□□ 0.45
SCARB1-207ENST00000541661 POLRMTO00411 1230 aaKnown RBP17.85■□□□□ 0.45
SCARB1-207ENST00000541661 DNAJC5GQ8N7S2 189 aa17.85■□□□□ 0.45
SCARB1-207ENST00000541661 SLC52A2Q9HAB3 445 aa17.85■□□□□ 0.45
SCARB1-207ENST00000541661 SBF1O95248 1867 aa17.84■□□□□ 0.45
SCARB1-207ENST00000541661 MRC1P22897 1456 aa17.84■□□□□ 0.45
SCARB1-207ENST00000541661 LGR6Q9HBX8 967 aa17.84■□□□□ 0.45
SCARB1-207ENST00000541661 SOS1Q07889 1333 aaPredicted RBP17.83■□□□□ 0.44
SCARB1-207ENST00000541661 AMER1Q5JTC6 1135 aaPredicted RBP17.83■□□□□ 0.44
SCARB1-207ENST00000541661 DNAJC10Q8IXB1 793 aa17.83■□□□□ 0.44
SCARB1-207ENST00000541661 RBM46Q8TBY0 533 aaKnown RBP17.83■□□□□ 0.44
SCARB1-207ENST00000541661 NRXN2Q9P2S2 1712 aa17.82■□□□□ 0.44
SCARB1-207ENST00000541661 RNMTO43148 476 aaKnown RBP17.82■□□□□ 0.44
SCARB1-207ENST00000541661 ZPR1O75312 459 aa17.82■□□□□ 0.44
SCARB1-207ENST00000541661 CYP19A1P11511 503 aaPredicted RBP17.82■□□□□ 0.44
SCARB1-207ENST00000541661 CHRNA5P30532 468 aa17.82■□□□□ 0.44
SCARB1-207ENST00000541661 AFDNP55196 1824 aaKnown RBP17.82■□□□□ 0.44
SCARB1-207ENST00000541661 USPL1Q5W0Q7 1092 aa17.81■□□□□ 0.44
SCARB1-207ENST00000541661 KCPQ6ZWJ8 1503 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms