RNA–Protein interactions for RNA: ENST00000541616.1

CACNA2D4-214, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 4

Gene CACNA2D4, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-214ENST00000541616 COL23A1Q86Y22 540 aaPredicted RBP23.04■■□□□ 1.28
CACNA2D4-214ENST00000541616 COL3A1P02461 1466 aaPredicted RBP23.04■■□□□ 1.28
CACNA2D4-214ENST00000541616 C4BP0C0L5 1744 aa23.03■■□□□ 1.28
CACNA2D4-214ENST00000541616 PPP2R1AP30153 589 aa23.03■■□□□ 1.28
CACNA2D4-214ENST00000541616 RBM42Q9BTD8 480 aaKnown RBP23.03■■□□□ 1.28
CACNA2D4-214ENST00000541616 NUDCQ9Y266 331 aa23.03■■□□□ 1.28
CACNA2D4-214ENST00000541616 NFATC2IPQ8NCF5 419 aa23.02■■□□□ 1.28
CACNA2D4-214ENST00000541616 FHDC1Q9C0D6 1143 aaPredicted RBP23.01■■□□□ 1.27
CACNA2D4-214ENST00000541616 MTHFSDQ2M296 383 aaKnown RBP23■■□□□ 1.27
CACNA2D4-214ENST00000541616 LINC00116Q8NCU8 138 aa23■■□□□ 1.27
CACNA2D4-214ENST00000541616 SCN11AQ9UI33 1791 aa22.99■■□□□ 1.27
CACNA2D4-214ENST00000541616 ITPK1Q13572 414 aa22.99■■□□□ 1.27
CACNA2D4-214ENST00000541616 SYT17Q9BSW7 474 aa22.98■■□□□ 1.27
CACNA2D4-214ENST00000541616 RNMTO43148 476 aaKnown RBP22.97■■□□□ 1.27
CACNA2D4-214ENST00000541616 PHF14O94880 888 aa22.97■■□□□ 1.27
CACNA2D4-214ENST00000541616 SSFA2P28290 1259 aa22.97■■□□□ 1.27
CACNA2D4-214ENST00000541616 GAS2L2Q8NHY3 880 aa22.97■■□□□ 1.27
CACNA2D4-214ENST00000541616 LGR6Q9HBX8 967 aa22.97■■□□□ 1.27
CACNA2D4-214ENST00000541616 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.96■■□□□ 1.27
CACNA2D4-214ENST00000541616 GNPATO15228 680 aa22.96■■□□□ 1.27
CACNA2D4-214ENST00000541616 SLC52A2Q9HAB3 445 aa22.96■■□□□ 1.27
CACNA2D4-214ENST00000541616 PTCD1O75127 700 aaKnown RBP22.95■■□□□ 1.26
CACNA2D4-214ENST00000541616 COL24A1Q17RW2 1714 aa22.95■■□□□ 1.26
CACNA2D4-214ENST00000541616 UBR3Q6ZT12 1888 aa22.95■■□□□ 1.26
CACNA2D4-214ENST00000541616 KLHL34Q8N239 644 aa22.95■■□□□ 1.26
CACNA2D4-214ENST00000541616 ZNF831Q5JPB2 1677 aa22.94■■□□□ 1.26
CACNA2D4-214ENST00000541616 U2AF1L5P0DN76 240 aaPredicted RBP22.94■■□□□ 1.26
CACNA2D4-214ENST00000541616 U2AF1Q01081 240 aaKnown RBP eCLIP22.94■■□□□ 1.26
CACNA2D4-214ENST00000541616 MSL1Q68DK7 614 aa22.94■■□□□ 1.26
CACNA2D4-214ENST00000541616 SLC4A9Q96Q91 983 aa22.94■■□□□ 1.26
CACNA2D4-214ENST00000541616 MAP3K5Q99683 1374 aa22.93■■□□□ 1.26
CACNA2D4-214ENST00000541616 PRKAR2BP31323 418 aa22.92■■□□□ 1.26
CACNA2D4-214ENST00000541616 RC3H1Q5TC82 1133 aaKnown RBP22.92■■□□□ 1.26
CACNA2D4-214ENST00000541616 RTCBQ9Y3I0 505 aaKnown RBP22.92■■□□□ 1.26
CACNA2D4-214ENST00000541616 VIRMAQ69YN4 1812 aaKnown RBP22.92■■□□□ 1.26
CACNA2D4-214ENST00000541616 GNAT3A8MTJ3 354 aa22.91■■□□□ 1.26
CACNA2D4-214ENST00000541616 RSPH6AQ9H0K4 717 aa22.91■■□□□ 1.26
CACNA2D4-214ENST00000541616 CNTNAP4Q9C0A0 1308 aa22.9■■□□□ 1.26
CACNA2D4-214ENST00000541616 TRAPPC3LQ5T215 181 aa22.9■■□□□ 1.26
CACNA2D4-214ENST00000541616 SMIM5Q71RC9 77 aa22.9■■□□□ 1.26
CACNA2D4-214ENST00000541616 AMIGO3Q86WK7 504 aa22.9■■□□□ 1.26
CACNA2D4-214ENST00000541616 FCHSD2O94868 740 aa22.89■■□□□ 1.25
CACNA2D4-214ENST00000541616 TEFQ10587 303 aa22.89■■□□□ 1.25
CACNA2D4-214ENST00000541616 DDX10Q13206 875 aaKnown RBP22.89■■□□□ 1.25
CACNA2D4-214ENST00000541616 MRC1P22897 1456 aa22.89■■□□□ 1.25
CACNA2D4-214ENST00000541616 ADAMTS7Q9UKP4 1686 aa22.87■■□□□ 1.25
CACNA2D4-214ENST00000541616 RPS6KA4O75676 772 aa22.87■■□□□ 1.25
CACNA2D4-214ENST00000541616 ADRA2BP18089 450 aa22.87■■□□□ 1.25
CACNA2D4-214ENST00000541616 PHACTR3Q96KR7 559 aa22.87■■□□□ 1.25
CACNA2D4-214ENST00000541616 COL5A3P25940 1745 aaPredicted RBP22.87■■□□□ 1.25
CACNA2D4-214ENST00000541616 NEFMP07197 916 aa22.86■■□□□ 1.25
CACNA2D4-214ENST00000541616 SLC39A6Q13433 755 aa22.86■■□□□ 1.25
CACNA2D4-214ENST00000541616 RALBP1Q15311 655 aa22.86■■□□□ 1.25
CACNA2D4-214ENST00000541616 ZEB1P37275 1124 aaPredicted RBP22.85■■□□□ 1.25
CACNA2D4-214ENST00000541616 CRKLP46109 303 aaKnown RBP22.85■■□□□ 1.25
CACNA2D4-214ENST00000541616 TTC5Q8N0Z6 440 aa22.85■■□□□ 1.25
CACNA2D4-214ENST00000541616 IL17REQ8NFR9 667 aa22.85■■□□□ 1.25
CACNA2D4-214ENST00000541616 RFC4P35249 363 aa22.84■■□□□ 1.25
CACNA2D4-214ENST00000541616 RTF1Q92541 710 aaKnown RBP22.83■■□□□ 1.25
CACNA2D4-214ENST00000541616 DNAJC10Q8IXB1 793 aa22.82■■□□□ 1.24
CACNA2D4-214ENST00000541616 ARHGEF1Q92888 912 aaKnown RBP22.82■■□□□ 1.24
CACNA2D4-214ENST00000541616 MYH14Q7Z406 1995 aaKnown RBP22.81■■□□□ 1.24
CACNA2D4-214ENST00000541616 GPR162Q16538 588 aa22.81■■□□□ 1.24
CACNA2D4-214ENST00000541616 VSIG10Q8N0Z9 540 aa22.81■■□□□ 1.24
CACNA2D4-214ENST00000541616 NLGN1Q8N2Q7 840 aa22.81■■□□□ 1.24
CACNA2D4-214ENST00000541616 CD2APQ9Y5K6 639 aa22.81■■□□□ 1.24
CACNA2D4-214ENST00000541616 TJP1Q07157 1748 aa22.81■■□□□ 1.24
CACNA2D4-214ENST00000541616 CICQ96RK0 1608 aaPredicted RBP22.81■■□□□ 1.24
CACNA2D4-214ENST00000541616 YY1P25490 414 aa22.8■■□□□ 1.24
CACNA2D4-214ENST00000541616 PNNQ9H307 717 aaKnown RBP22.8■■□□□ 1.24
CACNA2D4-214ENST00000541616 CCDC87Q9NVE4 849 aa22.8■■□□□ 1.24
CACNA2D4-214ENST00000541616 NLGN2Q8NFZ4 835 aa22.79■■□□□ 1.24
CACNA2D4-214ENST00000541616 KCPQ6ZWJ8 1503 aa22.78■■□□□ 1.24
CACNA2D4-214ENST00000541616 ZNF790Q6PG37 636 aa22.78■■□□□ 1.24
CACNA2D4-214ENST00000541616 PELP1Q8IZL8 1130 aaKnown RBP22.78■■□□□ 1.24
CACNA2D4-214ENST00000541616 CEMIPQ8WUJ3 1361 aa22.77■■□□□ 1.24
CACNA2D4-214ENST00000541616 HTATSF1O43719 755 aaKnown RBP22.77■■□□□ 1.24
CACNA2D4-214ENST00000541616 MMP10P09238 476 aa22.77■■□□□ 1.24
CACNA2D4-214ENST00000541616 INTS5Q6P9B9 1019 aaKnown RBP22.77■■□□□ 1.24
CACNA2D4-214ENST00000541616 BTBD11A6QL63 1104 aa22.76■■□□□ 1.23
CACNA2D4-214ENST00000541616 CYP19A1P11511 503 aaPredicted RBP22.76■■□□□ 1.23
CACNA2D4-214ENST00000541616 STARD3NLO95772 234 aa22.75■■□□□ 1.23
CACNA2D4-214ENST00000541616 GYS1P13807 737 aa22.75■■□□□ 1.23
CACNA2D4-214ENST00000541616 TEX13AQ9BXU3 409 aaPredicted RBP22.75■■□□□ 1.23
CACNA2D4-214ENST00000541616 SIPA1L3O60292 1781 aaPredicted RBP22.75■■□□□ 1.23
CACNA2D4-214ENST00000541616 UBR2Q8IWV8 1755 aa22.75■■□□□ 1.23
CACNA2D4-214ENST00000541616 MCM10Q7L590 875 aa22.74■■□□□ 1.23
CACNA2D4-214ENST00000541616 ZNF496Q96IT1 587 aaPredicted RBP22.74■■□□□ 1.23
CACNA2D4-214ENST00000541616 FMNL2Q96PY5 1086 aa22.74■■□□□ 1.23
CACNA2D4-214ENST00000541616 MYBBP1AQ9BQG0 1328 aaKnown RBP22.74■■□□□ 1.23
CACNA2D4-214ENST00000541616 ZPR1O75312 459 aa22.73■■□□□ 1.23
CACNA2D4-214ENST00000541616 MAPK8IP3Q9UPT6 1336 aa22.73■■□□□ 1.23
CACNA2D4-214ENST00000541616 C4AP0C0L4 1744 aa22.73■■□□□ 1.23
CACNA2D4-214ENST00000541616 HEG1Q9ULI3 1381 aa22.73■■□□□ 1.23
CACNA2D4-214ENST00000541616 PARP3Q9Y6F1 533 aa22.72■■□□□ 1.23
CACNA2D4-214ENST00000541616 SOS1Q07889 1333 aaPredicted RBP22.72■■□□□ 1.23
CACNA2D4-214ENST00000541616 USP42Q9H9J4 1324 aaKnown RBP22.72■■□□□ 1.23
CACNA2D4-214ENST00000541616 SRP68Q9UHB9 627 aaKnown RBP22.71■■□□□ 1.23
CACNA2D4-214ENST00000541616 ZBTB1Q9Y2K1 713 aa22.71■■□□□ 1.23
CACNA2D4-214ENST00000541616 GRIN3BO60391 1043 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms