RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 RIPOR2Q9Y4F9 1068 aa6.18□□□□□ -1.42
SNHG1-218ENST00000541615 CGNL1Q0VF96 1302 aa6.18□□□□□ -1.42
SNHG1-218ENST00000541615 IL16Q14005 1332 aa6.18□□□□□ -1.42
SNHG1-218ENST00000541615 ROCK2O75116 1388 aaKnown RBP6.18□□□□□ -1.42
SNHG1-218ENST00000541615 ARHGAP31Q2M1Z3 1444 aa6.17□□□□□ -1.42
SNHG1-218ENST00000541615 CNTLNQ9NXG0 1405 aa6.17□□□□□ -1.42
SNHG1-218ENST00000541615 KIF2AO00139 706 aaPredicted RBP6.17□□□□□ -1.42
SNHG1-218ENST00000541615 CPP00450 1065 aa6.17□□□□□ -1.42
SNHG1-218ENST00000541615 PRPHP41219 470 aa6.17□□□□□ -1.42
SNHG1-218ENST00000541615 PSMC1P62191 440 aaKnown RBP6.17□□□□□ -1.42
SNHG1-218ENST00000541615 PPP2R5AQ15172 486 aa6.17□□□□□ -1.42
SNHG1-218ENST00000541615 RGL3Q3MIN7 710 aa6.17□□□□□ -1.42
SNHG1-218ENST00000541615 MAP9Q49MG5 647 aa6.17□□□□□ -1.42
SNHG1-218ENST00000541615 GJC2Q5T442 439 aaPredicted RBP6.17□□□□□ -1.42
SNHG1-218ENST00000541615 C1QTNF12Q5T7M4 302 aa6.17□□□□□ -1.42
SNHG1-218ENST00000541615 ZNF280DQ6N043 979 aa6.17□□□□□ -1.42
SNHG1-218ENST00000541615 RPUSD2Q8IZ73 545 aaKnown RBP6.17□□□□□ -1.42
SNHG1-218ENST00000541615 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.17□□□□□ -1.42
SNHG1-218ENST00000541615 GIMAP7Q8NHV1 300 aa6.17□□□□□ -1.42
SNHG1-218ENST00000541615 EXOC6Q8TAG9 804 aa6.17□□□□□ -1.42
SNHG1-218ENST00000541615 ZCRB1Q8TBF4 217 aaKnown RBP6.17□□□□□ -1.42
SNHG1-218ENST00000541615 TCP11Q8WWU5 503 aa6.17□□□□□ -1.42
SNHG1-218ENST00000541615 DRC1Q96MC2 740 aa6.17□□□□□ -1.42
SNHG1-218ENST00000541615 IQCGQ9H095 443 aaKnown RBP6.17□□□□□ -1.42
SNHG1-218ENST00000541615 PRKRIP1Q9H875 184 aaPredicted RBP6.17□□□□□ -1.42
SNHG1-218ENST00000541615 PANK3Q9H999 370 aa6.17□□□□□ -1.42
SNHG1-218ENST00000541615 SPATS2LQ9NUQ6 558 aaKnown RBP6.17□□□□□ -1.42
SNHG1-218ENST00000541615 CWC25Q9NXE8 425 aaPredicted RBP6.17□□□□□ -1.42
SNHG1-218ENST00000541615 PSD3Q9NYI0 1048 aa6.17□□□□□ -1.42
SNHG1-218ENST00000541615 TBC1D2BQ9UPU7 963 aa6.17□□□□□ -1.42
SNHG1-218ENST00000541615 RPS6KL1Q9Y6S9 549 aa6.17□□□□□ -1.42
SNHG1-218ENST00000541615 KDM2BQ8NHM5 1336 aa6.17□□□□□ -1.42
SNHG1-218ENST00000541615 INSRP06213 1382 aa6.17□□□□□ -1.42
SNHG1-218ENST00000541615 CLIP1P30622 1438 aa6.16□□□□□ -1.42
SNHG1-218ENST00000541615 RAD21O60216 631 aa6.16□□□□□ -1.42
SNHG1-218ENST00000541615 KINO60870 393 aaKnown RBP6.16□□□□□ -1.42
SNHG1-218ENST00000541615 CDKL5O76039 1030 aa6.16□□□□□ -1.42
SNHG1-218ENST00000541615 NKX1-1Q15270 411 aaPredicted RBP6.16□□□□□ -1.42
SNHG1-218ENST00000541615 RBM26Q5T8P6 1007 aaKnown RBP6.16□□□□□ -1.42
SNHG1-218ENST00000541615 LEKR1Q6ZMV7 388 aa6.16□□□□□ -1.42
SNHG1-218ENST00000541615 ZBTB9Q96C00 473 aa6.16□□□□□ -1.42
SNHG1-218ENST00000541615 KIF1BPQ96EK5 621 aa6.16□□□□□ -1.42
SNHG1-218ENST00000541615 CFAP53Q96M91 514 aa6.16□□□□□ -1.42
SNHG1-218ENST00000541615 MTA3Q9BTC8 594 aa6.16□□□□□ -1.42
SNHG1-218ENST00000541615 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.16□□□□□ -1.42
SNHG1-218ENST00000541615 EIF3AQ14152 1382 aaKnown RBP6.16□□□□□ -1.42
SNHG1-218ENST00000541615 VPS8Q8N3P4 1428 aa6.16□□□□□ -1.42
SNHG1-218ENST00000541615 NCOA2Q15596 1464 aa6.15□□□□□ -1.42
SNHG1-218ENST00000541615 WDR97A6NE52 1622 aa6.15□□□□□ -1.42
SNHG1-218ENST00000541615 SMTNL1A8MU46 457 aa6.15□□□□□ -1.42
SNHG1-218ENST00000541615 IMPDH2P12268 514 aa6.15□□□□□ -1.42
SNHG1-218ENST00000541615 SRPK2P78362 688 aaKnown RBP6.15□□□□□ -1.42
SNHG1-218ENST00000541615 CRYMQ14894 314 aa6.15□□□□□ -1.42
SNHG1-218ENST00000541615 AMOTQ4VCS5 1084 aa6.15□□□□□ -1.42
SNHG1-218ENST00000541615 GORABQ5T7V8 394 aa6.15□□□□□ -1.42
SNHG1-218ENST00000541615 SRLQ86TD4 932 aa6.15□□□□□ -1.42
SNHG1-218ENST00000541615 ERC1Q8IUD2 1116 aa6.15□□□□□ -1.42
SNHG1-218ENST00000541615 HSCBQ8IWL3 235 aa6.15□□□□□ -1.42
SNHG1-218ENST00000541615 KCTD17Q8N5Z5 321 aa6.15□□□□□ -1.42
SNHG1-218ENST00000541615 ARMC2Q8NEN0 867 aa6.15□□□□□ -1.42
SNHG1-218ENST00000541615 FBXO18Q8NFZ0 1043 aa6.15□□□□□ -1.42
SNHG1-218ENST00000541615 MIPOL1Q8TD10 442 aa6.15□□□□□ -1.42
SNHG1-218ENST00000541615 DNAAF4Q8WXU2 420 aa6.15□□□□□ -1.42
SNHG1-218ENST00000541615 DDX11Q96FC9 970 aa6.15□□□□□ -1.42
SNHG1-218ENST00000541615 KCNK17Q96T54 332 aa6.15□□□□□ -1.42
SNHG1-218ENST00000541615 UTP6Q9NYH9 597 aaKnown RBP6.15□□□□□ -1.42
SNHG1-218ENST00000541615 POLKQ9UBT6 870 aa6.15□□□□□ -1.42
SNHG1-218ENST00000541615 MKRN1Q9UHC7 482 aaKnown RBP6.15□□□□□ -1.42
SNHG1-218ENST00000541615 TRAK1Q9UPV9 953 aa6.15□□□□□ -1.42
SNHG1-218ENST00000541615 KDM2AQ9Y2K7 1162 aa6.15□□□□□ -1.42
SNHG1-218ENST00000541615 PLEKHG2Q9H7P9 1386 aa6.15□□□□□ -1.43
SNHG1-218ENST00000541615 RRBP1Q9P2E9 1410 aaKnown RBP6.15□□□□□ -1.43
SNHG1-218ENST00000541615 GOLGA3Q08378 1498 aa6.15□□□□□ -1.43
SNHG1-218ENST00000541615 ERICH3Q5RHP9 1530 aa6.15□□□□□ -1.43
SNHG1-218ENST00000541615 ERICH4A6NGS2 130 aa6.14□□□□□ -1.43
SNHG1-218ENST00000541615 NAP1L1P55209 391 aaKnown RBP6.14□□□□□ -1.43
SNHG1-218ENST00000541615 SF3A1Q15459 793 aaKnown RBP6.14□□□□□ -1.43
SNHG1-218ENST00000541615 DNAJC21Q5F1R6 531 aaKnown RBP6.14□□□□□ -1.43
SNHG1-218ENST00000541615 PPP1R15BQ5SWA1 713 aa6.14□□□□□ -1.43
SNHG1-218ENST00000541615 CCDC186Q7Z3E2 898 aa6.14□□□□□ -1.43
SNHG1-218ENST00000541615 SDCCAG8Q86SQ7 713 aaPredicted RBP6.14□□□□□ -1.43
SNHG1-218ENST00000541615 KIAA1328Q86T90 577 aa6.14□□□□□ -1.43
SNHG1-218ENST00000541615 GAS2L3Q86XJ1 694 aa6.14□□□□□ -1.43
SNHG1-218ENST00000541615 DZIP3Q86Y13 1208 aaKnown RBP6.14□□□□□ -1.43
SNHG1-218ENST00000541615 ANKRD18AQ8IVF6 992 aa6.14□□□□□ -1.43
SNHG1-218ENST00000541615 TEX11Q8IYF3 940 aa6.14□□□□□ -1.43
SNHG1-218ENST00000541615 C10orf67Q8IYJ2 551 aa6.14□□□□□ -1.43
SNHG1-218ENST00000541615 TATDN2Q93075 761 aa6.14□□□□□ -1.43
SNHG1-218ENST00000541615 TBC1D32Q96NH3 1257 aa6.14□□□□□ -1.43
SNHG1-218ENST00000541615 SLC4A5Q9BY07 1137 aa6.14□□□□□ -1.43
SNHG1-218ENST00000541615 TOMM22Q9NS69 142 aa6.14□□□□□ -1.43
SNHG1-218ENST00000541615 SUN2Q9UH99 717 aa6.14□□□□□ -1.43
SNHG1-218ENST00000541615 VPS9D1Q9Y2B5 631 aa6.14□□□□□ -1.43
SNHG1-218ENST00000541615 MLECQ14165 292 aa6.13□□□□□ -1.43
SNHG1-218ENST00000541615 NEDD9Q14511 834 aa6.13□□□□□ -1.43
SNHG1-218ENST00000541615 FOXD4L6Q3SYB3 417 aaPredicted RBP6.13□□□□□ -1.43
SNHG1-218ENST00000541615 CCDC181Q5TID7 509 aa6.13□□□□□ -1.43
SNHG1-218ENST00000541615 FOXD4L3Q6VB84 417 aaPredicted RBP6.13□□□□□ -1.43
SNHG1-218ENST00000541615 SYT10Q6XYQ8 523 aa6.13□□□□□ -1.43
SNHG1-218ENST00000541615 KRBA2Q6ZNG9 492 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms