RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 ZNF831Q5JPB2 1677 aa19.13■□□□□ 0.65
SUDS3-203ENST00000541591 N4BP2Q86UW6 1770 aaPredicted RBP19.12■□□□□ 0.65
SUDS3-203ENST00000541591 LOC102724428A0A0B4J2F2 783 aa19.12■□□□□ 0.65
SUDS3-203ENST00000541591 SIK1P57059 783 aa19.12■□□□□ 0.65
SUDS3-203ENST00000541591 ATG3Q9NT62 314 aa19.12■□□□□ 0.65
SUDS3-203ENST00000541591 IL13P35225 146 aa19.11■□□□□ 0.65
SUDS3-203ENST00000541591 PLEKHO1Q53GL0 409 aaPredicted RBP19.11■□□□□ 0.65
SUDS3-203ENST00000541591 HMOX1P09601 288 aa19.1■□□□□ 0.65
SUDS3-203ENST00000541591 ATP6V1AP38606 617 aa19.1■□□□□ 0.65
SUDS3-203ENST00000541591 MTHFSP49914 203 aa19.1■□□□□ 0.65
SUDS3-203ENST00000541591 RBM42Q9BTD8 480 aaKnown RBP19.1■□□□□ 0.65
SUDS3-203ENST00000541591 MAP3K5Q99683 1374 aa19.09■□□□□ 0.65
SUDS3-203ENST00000541591 PER1O15534 1290 aaPredicted RBP19.09■□□□□ 0.65
SUDS3-203ENST00000541591 KDRP35968 1356 aa19.08■□□□□ 0.65
SUDS3-203ENST00000541591 SLC4A9Q96Q91 983 aa19.08■□□□□ 0.64
SUDS3-203ENST00000541591 COL3A1P02461 1466 aaPredicted RBP19.08■□□□□ 0.64
SUDS3-203ENST00000541591 GOLGB1Q14789 3259 aaKnown RBP19.08■□□□□ 0.64
SUDS3-203ENST00000541591 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.07■□□□□ 0.64
SUDS3-203ENST00000541591 GNPATO15228 680 aa19.07■□□□□ 0.64
SUDS3-203ENST00000541591 GPR162Q16538 588 aa19.07■□□□□ 0.64
SUDS3-203ENST00000541591 WWC3Q9ULE0 1092 aa19.07■□□□□ 0.64
SUDS3-203ENST00000541591 SIPA1L3O60292 1781 aaPredicted RBP19.06■□□□□ 0.64
SUDS3-203ENST00000541591 KIAA1551Q9HCM1 1747 aa19.06■□□□□ 0.64
SUDS3-203ENST00000541591 CABP4P57796 275 aa19.06■□□□□ 0.64
SUDS3-203ENST00000541591 C1orf141Q5JVX7 400 aa19.06■□□□□ 0.64
SUDS3-203ENST00000541591 KIF13BQ9NQT8 1826 aa19.06■□□□□ 0.64
SUDS3-203ENST00000541591 DCAF5Q96JK2 942 aa19.05■□□□□ 0.64
SUDS3-203ENST00000541591 UBR2Q8IWV8 1755 aa19.05■□□□□ 0.64
SUDS3-203ENST00000541591 ADAMTS7Q9UKP4 1686 aa19.05■□□□□ 0.64
SUDS3-203ENST00000541591 CICQ96RK0 1608 aaPredicted RBP19.03■□□□□ 0.64
SUDS3-203ENST00000541591 ERVV-2B6SEH9 535 aa19.03■□□□□ 0.64
SUDS3-203ENST00000541591 HSP90AB1P08238 724 aaKnown RBP19.03■□□□□ 0.64
SUDS3-203ENST00000541591 AMOTQ4VCS5 1084 aa19.03■□□□□ 0.64
SUDS3-203ENST00000541591 PLEKHG2Q9H7P9 1386 aa19.03■□□□□ 0.64
SUDS3-203ENST00000541591 PTCD1O75127 700 aaKnown RBP19.02■□□□□ 0.64
SUDS3-203ENST00000541591 NFATC2IPQ8NCF5 419 aa19.02■□□□□ 0.64
SUDS3-203ENST00000541591 FLAD1Q8NFF5 587 aa19.02■□□□□ 0.64
SUDS3-203ENST00000541591 DLG5Q8TDM6 1919 aa19.02■□□□□ 0.63
SUDS3-203ENST00000541591 BRCA1P38398 1863 aaKnown RBP19.01■□□□□ 0.63
SUDS3-203ENST00000541591 YBX3P16989 372 aaKnown RBP eCLIP19.01■□□□□ 0.63
SUDS3-203ENST00000541591 LGR6Q9HBX8 967 aa19.01■□□□□ 0.63
SUDS3-203ENST00000541591 AFDNP55196 1824 aaKnown RBP19■□□□□ 0.63
SUDS3-203ENST00000541591 DIAPH1O60610 1272 aaKnown RBP19■□□□□ 0.63
SUDS3-203ENST00000541591 SSFA2P28290 1259 aa19■□□□□ 0.63
SUDS3-203ENST00000541591 MRC1P22897 1456 aa18.99■□□□□ 0.63
SUDS3-203ENST00000541591 U2SURPO15042 1029 aaKnown RBP18.99■□□□□ 0.63
SUDS3-203ENST00000541591 MTHFSDQ2M296 383 aaKnown RBP18.98■□□□□ 0.63
SUDS3-203ENST00000541591 KCPQ6ZWJ8 1503 aa18.97■□□□□ 0.63
SUDS3-203ENST00000541591 SLC39A6Q13433 755 aa18.97■□□□□ 0.63
SUDS3-203ENST00000541591 ZNF784Q8NCA9 323 aaPredicted RBP18.97■□□□□ 0.63
SUDS3-203ENST00000541591 AKAP4Q5JQC9 854 aa18.96■□□□□ 0.63
SUDS3-203ENST00000541591 RTCBQ9Y3I0 505 aaKnown RBP18.96■□□□□ 0.63
SUDS3-203ENST00000541591 NPC1L1Q9UHC9 1359 aa18.94■□□□□ 0.62
SUDS3-203ENST00000541591 RNMTO43148 476 aaKnown RBP18.94■□□□□ 0.62
SUDS3-203ENST00000541591 TRAPPC3LQ5T215 181 aa18.94■□□□□ 0.62
SUDS3-203ENST00000541591 ARHGEF1Q92888 912 aaKnown RBP18.94■□□□□ 0.62
SUDS3-203ENST00000541591 CNTNAP4Q9C0A0 1308 aa18.94■□□□□ 0.62
SUDS3-203ENST00000541591 CACNA1SQ13698 1873 aa18.93■□□□□ 0.62
SUDS3-203ENST00000541591 MMP10P09238 476 aa18.93■□□□□ 0.62
SUDS3-203ENST00000541591 CRKLP46109 303 aaKnown RBP18.93■□□□□ 0.62
SUDS3-203ENST00000541591 DNAJC10Q8IXB1 793 aa18.93■□□□□ 0.62
SUDS3-203ENST00000541591 SLC52A2Q9HAB3 445 aa18.93■□□□□ 0.62
SUDS3-203ENST00000541591 SRP68Q9UHB9 627 aaKnown RBP18.93■□□□□ 0.62
SUDS3-203ENST00000541591 CD2APQ9Y5K6 639 aa18.92■□□□□ 0.62
SUDS3-203ENST00000541591 ARFGEF1Q9Y6D6 1849 aa18.91■□□□□ 0.62
SUDS3-203ENST00000541591 HMGB2P26583 209 aaKnown RBP18.91■□□□□ 0.62
SUDS3-203ENST00000541591 RPS6KA4O75676 772 aa18.9■□□□□ 0.62
SUDS3-203ENST00000541591 RFC4P35249 363 aa18.9■□□□□ 0.62
SUDS3-203ENST00000541591 CCDC88AQ3V6T2 1871 aa18.89■□□□□ 0.61
SUDS3-203ENST00000541591 GYS1P13807 737 aa18.89■□□□□ 0.61
SUDS3-203ENST00000541591 RC3H1Q5TC82 1133 aaKnown RBP18.89■□□□□ 0.61
SUDS3-203ENST00000541591 PXDNLA1KZ92 1463 aa18.89■□□□□ 0.61
SUDS3-203ENST00000541591 PPP2R1AP30153 589 aa18.88■□□□□ 0.61
SUDS3-203ENST00000541591 INTS5Q6P9B9 1019 aaKnown RBP18.87■□□□□ 0.61
SUDS3-203ENST00000541591 C10orf71Q711Q0 1435 aa18.87■□□□□ 0.61
SUDS3-203ENST00000541591 PHACTR3Q96KR7 559 aa18.87■□□□□ 0.61
SUDS3-203ENST00000541591 SCN7AQ01118 1682 aa18.86■□□□□ 0.61
SUDS3-203ENST00000541591 PRKAR2BP31323 418 aa18.86■□□□□ 0.61
SUDS3-203ENST00000541591 DLEC1Q9Y238 1755 aa18.86■□□□□ 0.61
SUDS3-203ENST00000541591 FKBP8Q14318 412 aa18.85■□□□□ 0.61
SUDS3-203ENST00000541591 ANKRD31Q8N7Z5 1873 aa18.85■□□□□ 0.61
SUDS3-203ENST00000541591 BCORQ6W2J9 1755 aa18.85■□□□□ 0.61
SUDS3-203ENST00000541591 SBF1O95248 1867 aa18.84■□□□□ 0.61
SUDS3-203ENST00000541591 USP42Q9H9J4 1324 aaKnown RBP18.84■□□□□ 0.61
SUDS3-203ENST00000541591 NRXN2Q9P2S2 1712 aa18.84■□□□□ 0.61
SUDS3-203ENST00000541591 A0A0G2JLW4 131 aa18.84■□□□□ 0.61
SUDS3-203ENST00000541591 GRIN3BO60391 1043 aa18.84■□□□□ 0.61
SUDS3-203ENST00000541591 ADRA2BP18089 450 aa18.84■□□□□ 0.61
SUDS3-203ENST00000541591 IL17REQ8NFR9 667 aa18.84■□□□□ 0.61
SUDS3-203ENST00000541591 CFAP53Q96M91 514 aa18.84■□□□□ 0.61
SUDS3-203ENST00000541591 RSPH6AQ9H0K4 717 aa18.84■□□□□ 0.61
SUDS3-203ENST00000541591 CCDC87Q9NVE4 849 aa18.84■□□□□ 0.61
SUDS3-203ENST00000541591 ZBTB1Q9Y2K1 713 aa18.84■□□□□ 0.61
SUDS3-203ENST00000541591 CYP19A1P11511 503 aaPredicted RBP18.83■□□□□ 0.6
SUDS3-203ENST00000541591 DDR1Q08345 913 aa18.83■□□□□ 0.6
SUDS3-203ENST00000541591 NLGN1Q8N2Q7 840 aa18.83■□□□□ 0.6
SUDS3-203ENST00000541591 PARP3Q9Y6F1 533 aa18.83■□□□□ 0.6
SUDS3-203ENST00000541591 ATP10DQ9P241 1426 aa18.83■□□□□ 0.6
SUDS3-203ENST00000541591 COL15A1P39059 1388 aa18.82■□□□□ 0.6
SUDS3-203ENST00000541591 SOS1Q07889 1333 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms