RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 ANO10Q9NW15 660 aa17.8■□□□□ 0.44
HMGA2-210ENST00000541363 CLGNO14967 610 aa17.8■□□□□ 0.44
HMGA2-210ENST00000541363 HSF2BPO75031 334 aa17.8■□□□□ 0.44
HMGA2-210ENST00000541363 YEATS4O95619 227 aa17.8■□□□□ 0.44
HMGA2-210ENST00000541363 PHAXQ9H814 394 aaKnown RBP17.79■□□□□ 0.44
HMGA2-210ENST00000541363 ACTN2P35609 894 aa17.79■□□□□ 0.44
HMGA2-210ENST00000541363 ARL1P40616 181 aaPredicted RBP17.79■□□□□ 0.44
HMGA2-210ENST00000541363 KIF20AO95235 890 aa17.79■□□□□ 0.44
HMGA2-210ENST00000541363 TDRD12Q587J7 1177 aaKnown RBP17.79■□□□□ 0.44
HMGA2-210ENST00000541363 CCT4P50991 539 aaKnown RBP17.79■□□□□ 0.44
HMGA2-210ENST00000541363 FAM114A1Q8IWE2 563 aa17.79■□□□□ 0.44
HMGA2-210ENST00000541363 ESPNB1AK53 854 aa17.79■□□□□ 0.44
HMGA2-210ENST00000541363 EHMT1Q9H9B1 1298 aa17.79■□□□□ 0.44
HMGA2-210ENST00000541363 MAP7D1Q3KQU3 841 aa17.79■□□□□ 0.44
HMGA2-210ENST00000541363 SIL1Q9H173 461 aa17.79■□□□□ 0.44
HMGA2-210ENST00000541363 PSMC4P43686 418 aa17.78■□□□□ 0.44
HMGA2-210ENST00000541363 TPD52P55327 224 aaPredicted RBP17.78■□□□□ 0.44
HMGA2-210ENST00000541363 KLHL10Q6JEL2 608 aa17.78■□□□□ 0.44
HMGA2-210ENST00000541363 GTF2A1P52655 376 aaPredicted RBP17.78■□□□□ 0.44
HMGA2-210ENST00000541363 TMEM266Q2M3C6 531 aa17.78■□□□□ 0.44
HMGA2-210ENST00000541363 TMOD2Q9NZR1 351 aa17.78■□□□□ 0.44
HMGA2-210ENST00000541363 PRPF4BQ13523 1007 aaKnown RBP17.77■□□□□ 0.44
HMGA2-210ENST00000541363 GTPBP4Q9BZE4 634 aaKnown RBP17.77■□□□□ 0.44
HMGA2-210ENST00000541363 JAKMIP1Q96N16 626 aaKnown RBP17.77■□□□□ 0.44
HMGA2-210ENST00000541363 GTF2F1P35269 517 aaKnown RBP eCLIP17.77■□□□□ 0.442e-9■■■□□ 16.1
HMGA2-210ENST00000541363 CUL5Q93034 780 aa17.77■□□□□ 0.43
HMGA2-210ENST00000541363 IQCGQ9H095 443 aaKnown RBP17.77■□□□□ 0.43
HMGA2-210ENST00000541363 CAMK4Q16566 473 aa17.77■□□□□ 0.43
HMGA2-210ENST00000541363 KIF3CO14782 793 aa17.76■□□□□ 0.43
HMGA2-210ENST00000541363 CKAP4Q07065 602 aaKnown RBP17.76■□□□□ 0.43
HMGA2-210ENST00000541363 PDZRN3Q9UPQ7 1066 aa17.76■□□□□ 0.43
HMGA2-210ENST00000541363 IFI16Q16666 785 aaKnown RBP17.76■□□□□ 0.43
HMGA2-210ENST00000541363 CEP135Q66GS9 1140 aa17.76■□□□□ 0.43
HMGA2-210ENST00000541363 LRP2BPQ9P2M1 347 aa17.76■□□□□ 0.43
HMGA2-210ENST00000541363 MKRN1Q9UHC7 482 aaKnown RBP17.76■□□□□ 0.43
HMGA2-210ENST00000541363 CNTLNQ9NXG0 1405 aa17.76■□□□□ 0.43
HMGA2-210ENST00000541363 ANKS4BQ8N8V4 417 aa17.76■□□□□ 0.43
HMGA2-210ENST00000541363 C1orf115Q9H7X2 142 aa17.76■□□□□ 0.43
HMGA2-210ENST00000541363 MSL1Q68DK7 614 aa17.75■□□□□ 0.43
HMGA2-210ENST00000541363 ZSCAN30Q86W11 494 aa17.75■□□□□ 0.43
HMGA2-210ENST00000541363 CFAP58Q5T655 872 aa17.75■□□□□ 0.43
HMGA2-210ENST00000541363 KIF4AO95239 1232 aa17.75■□□□□ 0.43
HMGA2-210ENST00000541363 ODF2LQ9ULJ1 636 aa17.75■□□□□ 0.43
HMGA2-210ENST00000541363 KANK4Q5T7N3 995 aaPredicted RBP17.74■□□□□ 0.43
HMGA2-210ENST00000541363 RGS22Q8NE09 1264 aa17.74■□□□□ 0.43
HMGA2-210ENST00000541363 TRERF1Q96PN7 1200 aa17.74■□□□□ 0.43
HMGA2-210ENST00000541363 NDC80O14777 642 aa17.74■□□□□ 0.43
HMGA2-210ENST00000541363 TTC16Q8NEE8 873 aa17.74■□□□□ 0.43
HMGA2-210ENST00000541363 PAIP2Q9BPZ3 127 aaKnown RBP17.74■□□□□ 0.43
HMGA2-210ENST00000541363 CLIP2Q9UDT6 1046 aa17.74■□□□□ 0.43
HMGA2-210ENST00000541363 NOP2P46087 812 aaKnown RBP17.74■□□□□ 0.43
HMGA2-210ENST00000541363 AACSQ86V21 672 aa17.74■□□□□ 0.43
HMGA2-210ENST00000541363 PRKCSHP14314 528 aaPredicted RBP17.74■□□□□ 0.43
HMGA2-210ENST00000541363 IL27Q8NEV9 243 aa17.74■□□□□ 0.43
HMGA2-210ENST00000541363 SMC6Q96SB8 1091 aa17.74■□□□□ 0.43
HMGA2-210ENST00000541363 DHX57Q6P158 1386 aaKnown RBP17.74■□□□□ 0.43
HMGA2-210ENST00000541363 CCDC183Q5T5S1 534 aa17.73■□□□□ 0.43
HMGA2-210ENST00000541363 GPRASP1Q5JY77 1395 aa17.73■□□□□ 0.43
HMGA2-210ENST00000541363 SYCE3A1L190 88 aa17.73■□□□□ 0.43
HMGA2-210ENST00000541363 CEP83Q9Y592 693 aa17.73■□□□□ 0.43
HMGA2-210ENST00000541363 CCDC96Q2M329 555 aa17.73■□□□□ 0.43
HMGA2-210ENST00000541363 GOLGA6L9A6NEM1 432 aa17.73■□□□□ 0.43
HMGA2-210ENST00000541363 RPUSD2Q8IZ73 545 aaKnown RBP17.73■□□□□ 0.43
HMGA2-210ENST00000541363 CABP4P57796 275 aa17.73■□□□□ 0.43
HMGA2-210ENST00000541363 PLVAPQ9BX97 442 aa17.73■□□□□ 0.43
HMGA2-210ENST00000541363 TTC21AQ8NDW8 1320 aa17.72■□□□□ 0.43
HMGA2-210ENST00000541363 CIZ1Q9ULV3 898 aaPredicted RBP17.72■□□□□ 0.43
HMGA2-210ENST00000541363 NOB1Q9ULX3 412 aaKnown RBP17.72■□□□□ 0.43
HMGA2-210ENST00000541363 DYNC1I1O14576 645 aa17.72■□□□□ 0.43
HMGA2-210ENST00000541363 TTC12Q9H892 705 aaPredicted RBP17.72■□□□□ 0.43
HMGA2-210ENST00000541363 CTAGE5O15320 804 aa17.72■□□□□ 0.43
HMGA2-210ENST00000541363 CWC27Q6UX04 472 aaKnown RBP17.72■□□□□ 0.43
HMGA2-210ENST00000541363 KIAA0753Q2KHM9 967 aa17.72■□□□□ 0.43
HMGA2-210ENST00000541363 NUTM2GQ5VZR2 741 aa17.72■□□□□ 0.43
HMGA2-210ENST00000541363 TMX1Q9H3N1 280 aa17.72■□□□□ 0.43
HMGA2-210ENST00000541363 PRDM2Q13029 1718 aa17.72■□□□□ 0.43
HMGA2-210ENST00000541363 NEMFO60524 1076 aa17.72■□□□□ 0.43
HMGA2-210ENST00000541363 CASTP20810 708 aaKnown RBP17.72■□□□□ 0.43
HMGA2-210ENST00000541363 STXBP4Q6ZWJ1 553 aa17.72■□□□□ 0.43
HMGA2-210ENST00000541363 AIDAQ96BJ3 306 aa17.72■□□□□ 0.43
HMGA2-210ENST00000541363 CCDC196A0A1B0GTZ2 297 aa17.71■□□□□ 0.43
HMGA2-210ENST00000541363 STMN4Q9H169 189 aaPredicted RBP17.71■□□□□ 0.43
HMGA2-210ENST00000541363 WDR70Q9NW82 654 aa17.71■□□□□ 0.43
HMGA2-210ENST00000541363 GSDMDP57764 484 aa17.71■□□□□ 0.43
HMGA2-210ENST00000541363 PUF60Q9UHX1 559 aaKnown RBP17.71■□□□□ 0.43
HMGA2-210ENST00000541363 TWISTNBQ3B726 338 aaPredicted RBP17.71■□□□□ 0.43
HMGA2-210ENST00000541363 OTUD6BQ8N6M0 293 aa17.71■□□□□ 0.43
HMGA2-210ENST00000541363 BAG4O95429 457 aaKnown RBP17.7■□□□□ 0.42
HMGA2-210ENST00000541363 MTIF2P46199 727 aaKnown RBP17.7■□□□□ 0.42
HMGA2-210ENST00000541363 SH3BP5O60239 455 aa17.7■□□□□ 0.42
HMGA2-210ENST00000541363 ZNF354CQ86Y25 554 aa17.7■□□□□ 0.42
HMGA2-210ENST00000541363 PRC1O43663 620 aa17.7■□□□□ 0.42
HMGA2-210ENST00000541363 TATP17735 454 aaPredicted RBP17.7■□□□□ 0.42
HMGA2-210ENST00000541363 JADE2Q9NQC1 790 aa17.7■□□□□ 0.42
HMGA2-210ENST00000541363 AMPD3Q01432 767 aa17.7■□□□□ 0.42
HMGA2-210ENST00000541363 RASAL2Q9UJF2 1139 aa17.7■□□□□ 0.42
HMGA2-210ENST00000541363 U3KPZ7 1027 aaPredicted RBP17.7■□□□□ 0.42
HMGA2-210ENST00000541363 A0A087WZG4 1122 aa17.7■□□□□ 0.42
HMGA2-210ENST00000541363 IVLP07476 585 aa17.7■□□□□ 0.42
HMGA2-210ENST00000541363 CRACR2BQ8N4Y2 399 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms