RNA–Protein interactions for RNA: ENST00000541249.5

SCNN1A-216, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 5

Gene SCNN1A, Length 432 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-216ENST00000541249 USHBP1Q8N6Y0 703 aa14.99□□□□□ -0.01
SCNN1A-216ENST00000541249 NBPF4Q96M43 638 aa14.99□□□□□ -0.01
SCNN1A-216ENST00000541249 FOXD4L1Q9NU39 408 aa14.99□□□□□ -0.01
SCNN1A-216ENST00000541249 MAP2P11137 1827 aaKnown RBP14.99□□□□□ -0.01
SCNN1A-216ENST00000541249 TATP17735 454 aaPredicted RBP14.98□□□□□ -0.01
SCNN1A-216ENST00000541249 RNF181Q9P0P0 153 aa14.98□□□□□ -0.01
SCNN1A-216ENST00000541249 LOC102724428A0A0B4J2F2 783 aa14.97□□□□□ -0.01
SCNN1A-216ENST00000541249 SIK1P57059 783 aa14.97□□□□□ -0.01
SCNN1A-216ENST00000541249 SLC12A5Q9H2X9 1139 aa14.97□□□□□ -0.01
SCNN1A-216ENST00000541249 CCDC87Q9NVE4 849 aa14.97□□□□□ -0.01
SCNN1A-216ENST00000541249 TERF2IPQ9NYB0 399 aa14.97□□□□□ -0.01
SCNN1A-216ENST00000541249 PCDH10Q9P2E7 1040 aa14.97□□□□□ -0.01
SCNN1A-216ENST00000541249 A0A1W2PP64 1363 aa14.97□□□□□ -0.01
SCNN1A-216ENST00000541249 ROCK2O75116 1388 aaKnown RBP14.97□□□□□ -0.01
SCNN1A-216ENST00000541249 PIGBQ92521 554 aa14.96□□□□□ -0.01
SCNN1A-216ENST00000541249 CYP27B1O15528 508 aa14.95□□□□□ -0.02
SCNN1A-216ENST00000541249 FBLN1P23142 703 aa14.95□□□□□ -0.02
SCNN1A-216ENST00000541249 TMF1P82094 1093 aa14.95□□□□□ -0.02
SCNN1A-216ENST00000541249 NLGN1Q8N2Q7 840 aa14.95□□□□□ -0.02
SCNN1A-216ENST00000541249 COG3Q96JB2 828 aa14.95□□□□□ -0.02
SCNN1A-216ENST00000541249 RTL1A6NKG5 1358 aa14.95□□□□□ -0.02
SCNN1A-216ENST00000541249 SBF1O95248 1867 aa14.95□□□□□ -0.02
SCNN1A-216ENST00000541249 C4AP0C0L4 1744 aa14.95□□□□□ -0.02
SCNN1A-216ENST00000541249 SMG6Q86US8 1419 aaKnown RBP14.94□□□□□ -0.02
SCNN1A-216ENST00000541249 KCNA3P22001 575 aa14.94□□□□□ -0.02
SCNN1A-216ENST00000541249 DCAF5Q96JK2 942 aa14.94□□□□□ -0.02
SCNN1A-216ENST00000541249 PIM2Q9P1W9 311 aa14.94□□□□□ -0.02
SCNN1A-216ENST00000541249 ITPK1Q13572 414 aa14.93□□□□□ -0.02
SCNN1A-216ENST00000541249 L3MBTL2Q969R5 705 aa14.93□□□□□ -0.02
SCNN1A-216ENST00000541249 ATP6V1AP38606 617 aa14.92□□□□□ -0.02
SCNN1A-216ENST00000541249 DALRD3Q5D0E6 543 aaKnown RBP14.92□□□□□ -0.02
SCNN1A-216ENST00000541249 TRAPPC3LQ5T215 181 aa14.92□□□□□ -0.02
SCNN1A-216ENST00000541249 PARP3Q9Y6F1 533 aa14.92□□□□□ -0.02
SCNN1A-216ENST00000541249 VEGFAP15692 232 aaPredicted RBP14.91□□□□□ -0.02
SCNN1A-216ENST00000541249 RTCBQ9Y3I0 505 aaKnown RBP14.91□□□□□ -0.02
SCNN1A-216ENST00000541249 ZC3H4Q9UPT8 1303 aaKnown RBP14.91□□□□□ -0.02
SCNN1A-216ENST00000541249 RRS1Q15050 365 aaKnown RBP14.9□□□□□ -0.02
SCNN1A-216ENST00000541249 NKX1-1Q15270 411 aaPredicted RBP14.89□□□□□ -0.03
SCNN1A-216ENST00000541249 PRDM10Q9NQV6 1147 aa14.89□□□□□ -0.03
SCNN1A-216ENST00000541249 ASAP1Q9ULH1 1129 aa14.89□□□□□ -0.03
SCNN1A-216ENST00000541249 FOXN1O15353 648 aa14.88□□□□□ -0.03
SCNN1A-216ENST00000541249 GYS1P13807 737 aa14.88□□□□□ -0.03
SCNN1A-216ENST00000541249 ARHGEF1Q92888 912 aaKnown RBP14.88□□□□□ -0.03
SCNN1A-216ENST00000541249 TMOD3Q9NYL9 352 aa14.88□□□□□ -0.03
SCNN1A-216ENST00000541249 GLTPD2A6NH11 291 aa14.87□□□□□ -0.03
SCNN1A-216ENST00000541249 RFC4P35249 363 aa14.87□□□□□ -0.03
SCNN1A-216ENST00000541249 FAM161AQ3B820 660 aa14.87□□□□□ -0.03
SCNN1A-216ENST00000541249 MKRN1Q9UHC7 482 aaKnown RBP14.86□□□□□ -0.03
SCNN1A-216ENST00000541249 INSRP06213 1382 aa14.85□□□□□ -0.03
SCNN1A-216ENST00000541249 KDM6AO15550 1401 aaPredicted RBP14.85□□□□□ -0.03
SCNN1A-216ENST00000541249 RASSF7Q02833 373 aa14.85□□□□□ -0.03
SCNN1A-216ENST00000541249 CREBZFQ9NS37 354 aa14.85□□□□□ -0.03
SCNN1A-216ENST00000541249 LMNB1P20700 586 aa14.84□□□□□ -0.03
SCNN1A-216ENST00000541249 CHRNA5P30532 468 aa14.84□□□□□ -0.03
SCNN1A-216ENST00000541249 CTCFP49711 727 aaPredicted RBP14.84□□□□□ -0.03
SCNN1A-216ENST00000541249 HSP90AB2PQ58FF8 381 aa14.84□□□□□ -0.03
SCNN1A-216ENST00000541249 RC3H1Q5TC82 1133 aaKnown RBP14.84□□□□□ -0.03
SCNN1A-216ENST00000541249 PUS7Q96PZ0 661 aaKnown RBP14.84□□□□□ -0.03
SCNN1A-216ENST00000541249 ATG3Q9NT62 314 aa14.84□□□□□ -0.03
SCNN1A-216ENST00000541249 SPG7Q9UQ90 795 aa14.83□□□□□ -0.04
SCNN1A-216ENST00000541249 FLT4P35916 1363 aa14.83□□□□□ -0.04
SCNN1A-216ENST00000541249 KDRP35968 1356 aa14.83□□□□□ -0.04
SCNN1A-216ENST00000541249 ZNF831Q5JPB2 1677 aa14.82□□□□□ -0.04
SCNN1A-216ENST00000541249 RPS6KA4O75676 772 aa14.82□□□□□ -0.04
SCNN1A-216ENST00000541249 AIDAQ96BJ3 306 aa14.82□□□□□ -0.04
SCNN1A-216ENST00000541249 COL5A3P25940 1745 aaPredicted RBP14.82□□□□□ -0.04
SCNN1A-216ENST00000541249 TIAM2Q8IVF5 1701 aa14.82□□□□□ -0.04
SCNN1A-216ENST00000541249 CNTNAP4Q9C0A0 1308 aa14.82□□□□□ -0.04
SCNN1A-216ENST00000541249 ABHD8Q96I13 439 aa14.81□□□□□ -0.04
SCNN1A-216ENST00000541249 CNTNAP1P78357 1384 aa14.81□□□□□ -0.04
SCNN1A-216ENST00000541249 POTECB2RU33 542 aa14.8□□□□□ -0.04
SCNN1A-216ENST00000541249 DDR1Q08345 913 aa14.8□□□□□ -0.04
SCNN1A-216ENST00000541249 SLC4A9Q96Q91 983 aa14.8□□□□□ -0.04
SCNN1A-216ENST00000541249 RBM42Q9BTD8 480 aaKnown RBP14.8□□□□□ -0.04
SCNN1A-216ENST00000541249 KIF24Q5T7B8 1368 aa14.8□□□□□ -0.04
SCNN1A-216ENST00000541249 CCDC88AQ3V6T2 1871 aa14.8□□□□□ -0.04
SCNN1A-216ENST00000541249 FKBP8Q14318 412 aa14.79□□□□□ -0.04
SCNN1A-216ENST00000541249 NCAPD2Q15021 1401 aa14.79□□□□□ -0.04
SCNN1A-216ENST00000541249 MYH14Q7Z406 1995 aaKnown RBP14.79□□□□□ -0.04
SCNN1A-216ENST00000541249 CARD11Q9BXL7 1154 aa14.79□□□□□ -0.04
SCNN1A-216ENST00000541249 GGNBP2Q9H3C7 697 aa14.79□□□□□ -0.04
SCNN1A-216ENST00000541249 FYB1O15117 783 aa14.78□□□□□ -0.04
SCNN1A-216ENST00000541249 MLLT1Q03111 559 aaPredicted RBP14.78□□□□□ -0.04
SCNN1A-216ENST00000541249 CHADLQ6NUI6 762 aa14.78□□□□□ -0.04
SCNN1A-216ENST00000541249 IFNL2Q8IZJ0 200 aa14.78□□□□□ -0.04
SCNN1A-216ENST00000541249 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.78□□□□□ -0.04
SCNN1A-216ENST00000541249 SRP68Q9UHB9 627 aaKnown RBP14.78□□□□□ -0.04
SCNN1A-216ENST00000541249 USP42Q9H9J4 1324 aaKnown RBP14.77□□□□□ -0.04
SCNN1A-216ENST00000541249 PHKG2P15735 406 aa14.77□□□□□ -0.05
SCNN1A-216ENST00000541249 LBX1P52954 281 aa14.77□□□□□ -0.05
SCNN1A-216ENST00000541249 DPY19L2Q6NUT2 758 aa14.77□□□□□ -0.05
SCNN1A-216ENST00000541249 POLRMTO00411 1230 aaKnown RBP14.76□□□□□ -0.05
SCNN1A-216ENST00000541249 WBP1LQ9NX94 342 aa14.76□□□□□ -0.05
SCNN1A-216ENST00000541249 TONSLQ96HA7 1378 aa14.75□□□□□ -0.05
SCNN1A-216ENST00000541249 SLC4A2P04920 1241 aa14.75□□□□□ -0.05
SCNN1A-216ENST00000541249 VEGFBP49765 207 aa14.75□□□□□ -0.05
SCNN1A-216ENST00000541249 VIRMAQ69YN4 1812 aaKnown RBP14.74□□□□□ -0.05
SCNN1A-216ENST00000541249 SIN3AQ96ST3 1273 aa14.74□□□□□ -0.05
SCNN1A-216ENST00000541249 DLEC1Q9Y238 1755 aa14.73□□□□□ -0.05
SCNN1A-216ENST00000541249 NFKBIEO00221 500 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms