RNA–Protein interactions for RNA: ENST00000541236.5

ARF3-207, Transcript of ADP ribosylation factor 3, humanhuman

TSL 2

Gene ARF3, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF3-207ENST00000541236 ZNF831Q5JPB2 1677 aa17.13■□□□□ 0.33
ARF3-207ENST00000541236 KIAA1551Q9HCM1 1747 aa17.13■□□□□ 0.33
ARF3-207ENST00000541236 SLC4A9Q96Q91 983 aa17.12■□□□□ 0.33
ARF3-207ENST00000541236 WWC3Q9ULE0 1092 aa17.12■□□□□ 0.33
ARF3-207ENST00000541236 TIMELESSQ9UNS1 1208 aa17.12■□□□□ 0.33
ARF3-207ENST00000541236 TRIM26Q12899 539 aaPredicted RBP17.11■□□□□ 0.33
ARF3-207ENST00000541236 PXDNLA1KZ92 1463 aa17.11■□□□□ 0.33
ARF3-207ENST00000541236 KIF13BQ9NQT8 1826 aa17.1■□□□□ 0.33
ARF3-207ENST00000541236 MMP10P09238 476 aa17.09■□□□□ 0.33
ARF3-207ENST00000541236 ZNF526Q8TF50 670 aaPredicted RBP17.09■□□□□ 0.33
ARF3-207ENST00000541236 COL5A3P25940 1745 aaPredicted RBP17.08■□□□□ 0.32
ARF3-207ENST00000541236 KDM6AO15550 1401 aaPredicted RBP17.08■□□□□ 0.32
ARF3-207ENST00000541236 ERVV-2B6SEH9 535 aa17.08■□□□□ 0.32
ARF3-207ENST00000541236 TNNT2P45379 298 aaPredicted RBP17.08■□□□□ 0.32
ARF3-207ENST00000541236 C10orf71Q711Q0 1435 aa17.07■□□□□ 0.32
ARF3-207ENST00000541236 CNTNAP4Q9C0A0 1308 aa17.06■□□□□ 0.32
ARF3-207ENST00000541236 KIF3CO14782 793 aa17.06■□□□□ 0.32
ARF3-207ENST00000541236 HSPA6P17066 643 aa17.06■□□□□ 0.32
ARF3-207ENST00000541236 RC3H1Q5TC82 1133 aaKnown RBP17.06■□□□□ 0.32
ARF3-207ENST00000541236 DCAF5Q96JK2 942 aa17.06■□□□□ 0.32
ARF3-207ENST00000541236 RTCBQ9Y3I0 505 aaKnown RBP17.06■□□□□ 0.32
ARF3-207ENST00000541236 TRAPPC3LQ5T215 181 aa17.05■□□□□ 0.32
ARF3-207ENST00000541236 NLGN1Q8N2Q7 840 aa17.05■□□□□ 0.32
ARF3-207ENST00000541236 ARHGEF1Q92888 912 aaKnown RBP17.05■□□□□ 0.32
ARF3-207ENST00000541236 C4AP0C0L4 1744 aa17.04■□□□□ 0.32
ARF3-207ENST00000541236 GYS1P13807 737 aa17.04■□□□□ 0.32
ARF3-207ENST00000541236 ADRA2BP18089 450 aa17.04■□□□□ 0.32
ARF3-207ENST00000541236 TGFB2P61812 414 aa17.04■□□□□ 0.32
ARF3-207ENST00000541236 IFFO2Q5TF58 517 aa17.04■□□□□ 0.32
ARF3-207ENST00000541236 N4BP2Q86UW6 1770 aaPredicted RBP17.03■□□□□ 0.32
ARF3-207ENST00000541236 RPS6KA4O75676 772 aa17.03■□□□□ 0.32
ARF3-207ENST00000541236 HSP90AB1P08238 724 aaKnown RBP17.03■□□□□ 0.32
ARF3-207ENST00000541236 RBM42Q9BTD8 480 aaKnown RBP17.03■□□□□ 0.32
ARF3-207ENST00000541236 CLSPNQ9HAW4 1339 aa17.02■□□□□ 0.32
ARF3-207ENST00000541236 A0A0G2JLW4 131 aa17.02■□□□□ 0.32
ARF3-207ENST00000541236 PLEKHO1Q53GL0 409 aaPredicted RBP17.02■□□□□ 0.32
ARF3-207ENST00000541236 AEBP1Q8IUX7 1158 aa17.02■□□□□ 0.32
ARF3-207ENST00000541236 POLR3GLQ9BT43 218 aa17.02■□□□□ 0.32
ARF3-207ENST00000541236 PANK3Q9H999 370 aa17.02■□□□□ 0.32
ARF3-207ENST00000541236 MYH14Q7Z406 1995 aaKnown RBP17.01■□□□□ 0.31
ARF3-207ENST00000541236 AMOTQ4VCS5 1084 aa17.01■□□□□ 0.31
ARF3-207ENST00000541236 ZNF530Q6P9A1 599 aaPredicted RBP17.01■□□□□ 0.31
ARF3-207ENST00000541236 BRCA1P38398 1863 aaKnown RBP17.01■□□□□ 0.31
ARF3-207ENST00000541236 DPEP1P16444 411 aa17■□□□□ 0.31
ARF3-207ENST00000541236 CABP4P57796 275 aa17■□□□□ 0.31
ARF3-207ENST00000541236 BCS1LQ9Y276 419 aa17■□□□□ 0.31
ARF3-207ENST00000541236 TJP1Q07157 1748 aa16.99■□□□□ 0.31
ARF3-207ENST00000541236 KCNA3P22001 575 aa16.99■□□□□ 0.31
ARF3-207ENST00000541236 RFC4P35249 363 aa16.99■□□□□ 0.31
ARF3-207ENST00000541236 CCDC87Q9NVE4 849 aa16.99■□□□□ 0.31
ARF3-207ENST00000541236 HSPA5P11021 654 aaKnown RBP16.98■□□□□ 0.31
ARF3-207ENST00000541236 MTHFSP49914 203 aa16.98■□□□□ 0.31
ARF3-207ENST00000541236 ADAMTS7Q9UKP4 1686 aa16.97■□□□□ 0.31
ARF3-207ENST00000541236 PTCD1O75127 700 aaKnown RBP16.97■□□□□ 0.31
ARF3-207ENST00000541236 CRKLP46109 303 aaKnown RBP16.97■□□□□ 0.31
ARF3-207ENST00000541236 EIF4G2P78344 907 aaKnown RBP eCLIP16.97■□□□□ 0.31
ARF3-207ENST00000541236 NFATC2IPQ8NCF5 419 aa16.97■□□□□ 0.31
ARF3-207ENST00000541236 PARP3Q9Y6F1 533 aa16.97■□□□□ 0.31
ARF3-207ENST00000541236 SRP68Q9UHB9 627 aaKnown RBP16.96■□□□□ 0.31
ARF3-207ENST00000541236 USP42Q9H9J4 1324 aaKnown RBP16.96■□□□□ 0.3
ARF3-207ENST00000541236 FCHSD2O94868 740 aa16.95■□□□□ 0.3
ARF3-207ENST00000541236 IL13P35225 146 aa16.95■□□□□ 0.3
ARF3-207ENST00000541236 DDR1Q08345 913 aa16.95■□□□□ 0.3
ARF3-207ENST00000541236 FKBP8Q14318 412 aa16.95■□□□□ 0.3
ARF3-207ENST00000541236 C1orf141Q5JVX7 400 aa16.95■□□□□ 0.3
ARF3-207ENST00000541236 SULT6B1Q6IMI4 303 aa16.95■□□□□ 0.3
ARF3-207ENST00000541236 ARHGAP27Q6ZUM4 889 aa16.95■□□□□ 0.3
ARF3-207ENST00000541236 MORC1Q86VD1 984 aa16.95■□□□□ 0.3
ARF3-207ENST00000541236 ARFGEF1Q9Y6D6 1849 aa16.94■□□□□ 0.3
ARF3-207ENST00000541236 TOMM70O94826 608 aa16.94■□□□□ 0.3
ARF3-207ENST00000541236 INTS5Q6P9B9 1019 aaKnown RBP16.94■□□□□ 0.3
ARF3-207ENST00000541236 NMRK2Q9NPI5 230 aa16.94■□□□□ 0.3
ARF3-207ENST00000541236 SCN11AQ9UI33 1791 aa16.94■□□□□ 0.3
ARF3-207ENST00000541236 PIM2Q9P1W9 311 aa16.92■□□□□ 0.3
ARF3-207ENST00000541236 MRC1P22897 1456 aa16.92■□□□□ 0.3
ARF3-207ENST00000541236 TM4SF1P30408 202 aa16.91■□□□□ 0.3
ARF3-207ENST00000541236 APLP1P51693 650 aa16.91■□□□□ 0.3
ARF3-207ENST00000541236 C9orf131Q5VYM1 1079 aa16.91■□□□□ 0.3
ARF3-207ENST00000541236 DNAJC5GQ8N7S2 189 aa16.91■□□□□ 0.3
ARF3-207ENST00000541236 PCGF6Q9BYE7 350 aa16.91■□□□□ 0.3
ARF3-207ENST00000541236 POLRMTO00411 1230 aaKnown RBP16.9■□□□□ 0.3
ARF3-207ENST00000541236 AMER1Q5JTC6 1135 aaPredicted RBP16.9■□□□□ 0.3
ARF3-207ENST00000541236 CHRNA5P30532 468 aa16.89■□□□□ 0.29
ARF3-207ENST00000541236 DALRD3Q5D0E6 543 aaKnown RBP16.89■□□□□ 0.29
ARF3-207ENST00000541236 AKAP4Q5JQC9 854 aa16.89■□□□□ 0.29
ARF3-207ENST00000541236 DNAJC10Q8IXB1 793 aa16.89■□□□□ 0.29
ARF3-207ENST00000541236 SLC52A2Q9HAB3 445 aa16.89■□□□□ 0.29
ARF3-207ENST00000541236 LGR6Q9HBX8 967 aa16.89■□□□□ 0.29
ARF3-207ENST00000541236 KCPQ6ZWJ8 1503 aa16.89■□□□□ 0.29
ARF3-207ENST00000541236 SOS1Q07889 1333 aaPredicted RBP16.89■□□□□ 0.29
ARF3-207ENST00000541236 KNSTRNQ9Y448 316 aa16.88■□□□□ 0.29
ARF3-207ENST00000541236 CYP19A1P11511 503 aaPredicted RBP16.87■□□□□ 0.29
ARF3-207ENST00000541236 USPL1Q5W0Q7 1092 aa16.87■□□□□ 0.29
ARF3-207ENST00000541236 RBM46Q8TBY0 533 aaKnown RBP16.86■□□□□ 0.29
ARF3-207ENST00000541236 NRXN2Q9P2S2 1712 aa16.86■□□□□ 0.29
ARF3-207ENST00000541236 WDR90Q96KV7 1748 aa16.85■□□□□ 0.29
ARF3-207ENST00000541236 RNMTO43148 476 aaKnown RBP16.85■□□□□ 0.29
ARF3-207ENST00000541236 SLC39A6Q13433 755 aa16.85■□□□□ 0.29
ARF3-207ENST00000541236 BCL2L12Q9HB09 334 aa16.85■□□□□ 0.29
ARF3-207ENST00000541236 NARFQ9UHQ1 456 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms