RNA–Protein interactions for RNA: ENST00000540740.5

PTPN6-214, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-214ENST00000540740 COL24A1Q17RW2 1714 aa15.35■□□□□ 0.05
PTPN6-214ENST00000540740 ATP6V1AP38606 617 aa15.35■□□□□ 0.05
PTPN6-214ENST00000540740 ITPK1Q13572 414 aa15.35■□□□□ 0.05
PTPN6-214ENST00000540740 COL23A1Q86Y22 540 aaPredicted RBP15.35■□□□□ 0.05
PTPN6-214ENST00000540740 SGIP1Q9BQI5 828 aa15.35■□□□□ 0.05
PTPN6-214ENST00000540740 RBM42Q9BTD8 480 aaKnown RBP15.35■□□□□ 0.05
PTPN6-214ENST00000540740 COL5A3P25940 1745 aaPredicted RBP15.34■□□□□ 0.05
PTPN6-214ENST00000540740 MRC1P22897 1456 aa15.34■□□□□ 0.05
PTPN6-214ENST00000540740 PHF14O94880 888 aa15.34■□□□□ 0.05
PTPN6-214ENST00000540740 SMIM5Q71RC9 77 aa15.34■□□□□ 0.05
PTPN6-214ENST00000540740 AMIGO3Q86WK7 504 aa15.34■□□□□ 0.05
PTPN6-214ENST00000540740 NFATC2IPQ8NCF5 419 aa15.34■□□□□ 0.05
PTPN6-214ENST00000540740 ZNF831Q5JPB2 1677 aa15.34■□□□□ 0.05
PTPN6-214ENST00000540740 ADAMTS7Q9UKP4 1686 aa15.34■□□□□ 0.05
PTPN6-214ENST00000540740 SLC16A10Q8TF71 515 aa15.33■□□□□ 0.04
PTPN6-214ENST00000540740 LGR6Q9HBX8 967 aa15.33■□□□□ 0.04
PTPN6-214ENST00000540740 TJP1Q07157 1748 aa15.32■□□□□ 0.04
PTPN6-214ENST00000540740 HMGB2P26583 209 aaKnown RBP15.32■□□□□ 0.04
PTPN6-214ENST00000540740 PRKAR2BP31323 418 aa15.32■□□□□ 0.04
PTPN6-214ENST00000540740 DDX10Q13206 875 aaKnown RBP15.32■□□□□ 0.04
PTPN6-214ENST00000540740 MSL1Q68DK7 614 aa15.32■□□□□ 0.04
PTPN6-214ENST00000540740 SLC4A9Q96Q91 983 aa15.32■□□□□ 0.04
PTPN6-214ENST00000540740 ARXQ96QS3 562 aa15.32■□□□□ 0.04
PTPN6-214ENST00000540740 FHDC1Q9C0D6 1143 aaPredicted RBP15.32■□□□□ 0.04
PTPN6-214ENST00000540740 NUDCQ9Y266 331 aa15.32■□□□□ 0.04
PTPN6-214ENST00000540740 GNPATO15228 680 aa15.31■□□□□ 0.04
PTPN6-214ENST00000540740 RNMTO43148 476 aaKnown RBP15.31■□□□□ 0.04
PTPN6-214ENST00000540740 PTCD1O75127 700 aaKnown RBP15.31■□□□□ 0.04
PTPN6-214ENST00000540740 U2AF1L5P0DN76 240 aaPredicted RBP15.31■□□□□ 0.04
PTPN6-214ENST00000540740 POLD1P28340 1107 aa15.31■□□□□ 0.04
PTPN6-214ENST00000540740 U2AF1Q01081 240 aaKnown RBP eCLIP15.31■□□□□ 0.04
PTPN6-214ENST00000540740 KLHL34Q8N239 644 aa15.31■□□□□ 0.04
PTPN6-214ENST00000540740 RSPH6AQ9H0K4 717 aa15.31■□□□□ 0.04
PTPN6-214ENST00000540740 MAP3K5Q99683 1374 aa15.31■□□□□ 0.04
PTPN6-214ENST00000540740 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.3■□□□□ 0.04
PTPN6-214ENST00000540740 SLC52A2Q9HAB3 445 aa15.3■□□□□ 0.04
PTPN6-214ENST00000540740 FLAD1Q8NFF5 587 aa15.29■□□□□ 0.04
PTPN6-214ENST00000540740 GAS2L2Q8NHY3 880 aa15.29■□□□□ 0.04
PTPN6-214ENST00000540740 PHACTR3Q96KR7 559 aa15.29■□□□□ 0.04
PTPN6-214ENST00000540740 CICQ96RK0 1608 aaPredicted RBP15.28■□□□□ 0.04
PTPN6-214ENST00000540740 MYH14Q7Z406 1995 aaKnown RBP15.28■□□□□ 0.04
PTPN6-214ENST00000540740 SYT17Q9BSW7 474 aa15.28■□□□□ 0.04
PTPN6-214ENST00000540740 SIPA1L3O60292 1781 aaPredicted RBP15.28■□□□□ 0.04
PTPN6-214ENST00000540740 KCPQ6ZWJ8 1503 aa15.27■□□□□ 0.04
PTPN6-214ENST00000540740 UTRNP46939 3433 aa15.27■□□□□ 0.04
PTPN6-214ENST00000540740 UBR2Q8IWV8 1755 aa15.27■□□□□ 0.04
PTPN6-214ENST00000540740 C4AP0C0L4 1744 aa15.27■□□□□ 0.04
PTPN6-214ENST00000540740 GNAT3A8MTJ3 354 aa15.27■□□□□ 0.04
PTPN6-214ENST00000540740 SSFA2P28290 1259 aa15.27■□□□□ 0.04
PTPN6-214ENST00000540740 SLC39A6Q13433 755 aa15.27■□□□□ 0.04
PTPN6-214ENST00000540740 CNTNAP4Q9C0A0 1308 aa15.25■□□□□ 0.03
PTPN6-214ENST00000540740 GOLGB1Q14789 3259 aaKnown RBP15.24■□□□□ 0.03
PTPN6-214ENST00000540740 FCHSD2O94868 740 aa15.24■□□□□ 0.03
PTPN6-214ENST00000540740 ZEB1P37275 1124 aaPredicted RBP15.24■□□□□ 0.03
PTPN6-214ENST00000540740 TEFQ10587 303 aa15.24■□□□□ 0.03
PTPN6-214ENST00000540740 IL17REQ8NFR9 667 aa15.24■□□□□ 0.03
PTPN6-214ENST00000540740 RTCBQ9Y3I0 505 aaKnown RBP15.24■□□□□ 0.03
PTPN6-214ENST00000540740 DCAF8L1A6NGE4 600 aa15.23■□□□□ 0.03
PTPN6-214ENST00000540740 CRKLP46109 303 aaKnown RBP15.23■□□□□ 0.03
PTPN6-214ENST00000540740 RALBP1Q15311 655 aa15.23■□□□□ 0.03
PTPN6-214ENST00000540740 DNAJC10Q8IXB1 793 aa15.23■□□□□ 0.03
PTPN6-214ENST00000540740 DLG5Q8TDM6 1919 aa15.23■□□□□ 0.03
PTPN6-214ENST00000540740 TRAPPC3LQ5T215 181 aa15.22■□□□□ 0.03
PTPN6-214ENST00000540740 RC3H1Q5TC82 1133 aaKnown RBP15.22■□□□□ 0.03
PTPN6-214ENST00000540740 TTC5Q8N0Z6 440 aa15.22■□□□□ 0.03
PTPN6-214ENST00000540740 CEMIPQ8WUJ3 1361 aa15.22■□□□□ 0.03
PTPN6-214ENST00000540740 NLGN2Q8NFZ4 835 aa15.21■□□□□ 0.03
PTPN6-214ENST00000540740 MYBBP1AQ9BQG0 1328 aaKnown RBP15.2■□□□□ 0.02
PTPN6-214ENST00000540740 RPS6KA4O75676 772 aa15.2■□□□□ 0.02
PTPN6-214ENST00000540740 ADRA2BP18089 450 aa15.2■□□□□ 0.02
PTPN6-214ENST00000540740 MCM10Q7L590 875 aa15.2■□□□□ 0.02
PTPN6-214ENST00000540740 RTF1Q92541 710 aaKnown RBP15.2■□□□□ 0.02
PTPN6-214ENST00000540740 ARHGEF1Q92888 912 aaKnown RBP15.2■□□□□ 0.02
PTPN6-214ENST00000540740 NEFMP07197 916 aa15.19■□□□□ 0.02
PTPN6-214ENST00000540740 RFC4P35249 363 aa15.19■□□□□ 0.02
PTPN6-214ENST00000540740 DCTN1Q14203 1278 aa15.19■□□□□ 0.02
PTPN6-214ENST00000540740 INTS5Q6P9B9 1019 aaKnown RBP15.19■□□□□ 0.02
PTPN6-214ENST00000540740 CCDC87Q9NVE4 849 aa15.19■□□□□ 0.02
PTPN6-214ENST00000540740 CYP19A1P11511 503 aaPredicted RBP15.18■□□□□ 0.02
PTPN6-214ENST00000540740 ZNF790Q6PG37 636 aa15.18■□□□□ 0.02
PTPN6-214ENST00000540740 PELP1Q8IZL8 1130 aaKnown RBP15.18■□□□□ 0.02
PTPN6-214ENST00000540740 MAPK8IP3Q9UPT6 1336 aa15.17■□□□□ 0.02
PTPN6-214ENST00000540740 BTBD11A6QL63 1104 aa15.17■□□□□ 0.02
PTPN6-214ENST00000540740 MMP10P09238 476 aa15.17■□□□□ 0.02
PTPN6-214ENST00000540740 ZNF496Q96IT1 587 aaPredicted RBP15.17■□□□□ 0.02
PTPN6-214ENST00000540740 PLEKHF1Q96S99 279 aa15.17■□□□□ 0.02
PTPN6-214ENST00000540740 SRP68Q9UHB9 627 aaKnown RBP15.17■□□□□ 0.02
PTPN6-214ENST00000540740 SOS1Q07889 1333 aaPredicted RBP15.17■□□□□ 0.02
PTPN6-214ENST00000540740 HEG1Q9ULI3 1381 aa15.16■□□□□ 0.02
PTPN6-214ENST00000540740 KCNQ3O43525 872 aa15.16■□□□□ 0.02
PTPN6-214ENST00000540740 GYS1P13807 737 aa15.16■□□□□ 0.02
PTPN6-214ENST00000540740 GPR162Q16538 588 aa15.16■□□□□ 0.02
PTPN6-214ENST00000540740 VSIG10Q8N0Z9 540 aa15.16■□□□□ 0.02
PTPN6-214ENST00000540740 ZBTB1Q9Y2K1 713 aa15.16■□□□□ 0.02
PTPN6-214ENST00000540740 COL15A1P39059 1388 aa15.15■□□□□ 0.02
PTPN6-214ENST00000540740 FMNL2Q96PY5 1086 aa15.15■□□□□ 0.02
PTPN6-214ENST00000540740 USP42Q9H9J4 1324 aaKnown RBP15.15■□□□□ 0.02
PTPN6-214ENST00000540740 YY1P25490 414 aa15.14■□□□□ 0.01
PTPN6-214ENST00000540740 CANXP27824 592 aaKnown RBP15.14■□□□□ 0.01
PTPN6-214ENST00000540740 NFE2L2Q16236 605 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms