RNA–Protein interactions for RNA: ENST00000540708.5

ARL6IP4-218, Transcript of ADP ribosylation factor like GTPase 6 interacting protein 4, human

TSL 2

Gene ARL6IP4, Length 1,782 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARL6IP4-218	ENST00000540708	PARP4	Q9UKK3	1724 aa	Known RBP	31.51	■■■□□ 2.63
ARL6IP4-218	ENST00000540708	STRN4	Q9NRL3	753 aa		31.51	■■■□□ 2.63
ARL6IP4-218	ENST00000540708	ZBTB40	Q9NUA8	1239 aa		31.51	■■■□□ 2.63
ARL6IP4-218	ENST00000540708	PHLPP1	O60346	1717 aa		31.5	■■■□□ 2.63
ARL6IP4-218	ENST00000540708	HOXB7	P09629	217 aa		31.49	■■■□□ 2.63
ARL6IP4-218	ENST00000540708	CHMP4A	Q9BY43	222 aa		31.49	■■■□□ 2.63
ARL6IP4-218	ENST00000540708	RWDD1	Q9H446	243 aa	Predicted RBP	31.49	■■■□□ 2.63
ARL6IP4-218	ENST00000540708	SIPA1L3	O60292	1781 aa	Predicted RBP	31.49	■■■□□ 2.63
ARL6IP4-218	ENST00000540708	SCN11A	Q9UI33	1791 aa		31.48	■■■□□ 2.63
ARL6IP4-218	ENST00000540708	HSP90AB1	P08238	724 aa	Known RBP	31.48	■■■□□ 2.63
ARL6IP4-218	ENST00000540708	COL14A1	Q05707	1796 aa	Known RBP	31.47	■■■□□ 2.63
ARL6IP4-218	ENST00000540708	KDM6A	O15550	1401 aa	Predicted RBP	31.47	■■■□□ 2.63
ARL6IP4-218	ENST00000540708	LARP1	Q6PKG0	1096 aa	Known RBP	31.47	■■■□□ 2.63
ARL6IP4-218	ENST00000540708	COL16A1	Q07092	1604 aa	Predicted RBP	31.47	■■■□□ 2.63
ARL6IP4-218	ENST00000540708	CYP27B1	O15528	508 aa		31.46	■■■□□ 2.63
ARL6IP4-218	ENST00000540708	DCAF5	Q96JK2	942 aa		31.46	■■■□□ 2.63
ARL6IP4-218	ENST00000540708	RGS12	O14924	1447 aa		31.46	■■■□□ 2.63
ARL6IP4-218	ENST00000540708	ZBTB7B	O15156	539 aa	Predicted RBP	31.45	■■■□□ 2.62
ARL6IP4-218	ENST00000540708	KCNQ3	O43525	872 aa		31.45	■■■□□ 2.62
ARL6IP4-218	ENST00000540708	IL2RB	P14784	551 aa		31.44	■■■□□ 2.62
ARL6IP4-218	ENST00000540708	HDGFL1	Q5TGJ6	251 aa		31.44	■■■□□ 2.62
ARL6IP4-218	ENST00000540708	INTS3	Q68E01	1043 aa	Known RBP	31.44	■■■□□ 2.62
ARL6IP4-218	ENST00000540708	SLC52A2	Q9HAB3	445 aa		31.44	■■■□□ 2.62
ARL6IP4-218	ENST00000540708	BTG4	Q9NY30	223 aa		31.44	■■■□□ 2.62
ARL6IP4-218	ENST00000540708	ZCRB1	Q8TBF4	217 aa	Known RBP	31.43	■■■□□ 2.62
ARL6IP4-218	ENST00000540708	CACNA1F	O60840	1977 aa		31.43	■■■□□ 2.62
ARL6IP4-218	ENST00000540708	PCDH11X	Q9BZA7	1347 aa		31.42	■■■□□ 2.62
ARL6IP4-218	ENST00000540708	PCDH11Y	Q9BZA8	1340 aa		31.42	■■■□□ 2.62
ARL6IP4-218	ENST00000540708	PIP4K2B	P78356	416 aa		31.42	■■■□□ 2.62
ARL6IP4-218	ENST00000540708	G2E3	Q7L622	706 aa		31.41	■■■□□ 2.62
ARL6IP4-218	ENST00000540708	NECTIN2	Q92692	538 aa		31.4	■■■□□ 2.62
ARL6IP4-218	ENST00000540708	MRC1	P22897	1456 aa		31.4	■■■□□ 2.62
ARL6IP4-218	ENST00000540708	HDAC1	Q13547	482 aa	Predicted RBP	31.4	■■■□□ 2.62
ARL6IP4-218	ENST00000540708	HEG1	Q9ULI3	1381 aa		31.38	■■■□□ 2.61
ARL6IP4-218	ENST00000540708	FLII	Q13045	1269 aa		31.38	■■■□□ 2.61
ARL6IP4-218	ENST00000540708	UBAP1L	F5GYI3	381 aa		31.36	■■■□□ 2.61
ARL6IP4-218	ENST00000540708	NFATC2IP	Q8NCF5	419 aa		31.36	■■■□□ 2.61
ARL6IP4-218	ENST00000540708	EIF2S2	P20042	333 aa	Known RBP	31.35	■■■□□ 2.61
ARL6IP4-218	ENST00000540708	SKAP1	Q86WV1	359 aa		31.35	■■■□□ 2.61
ARL6IP4-218	ENST00000540708	GIGYF1	O75420	1035 aa	Predicted RBP	31.35	■■■□□ 2.61
ARL6IP4-218	ENST00000540708	ZNF790	Q6PG37	636 aa		31.35	■■■□□ 2.61
ARL6IP4-218	ENST00000540708	RBM19	Q9Y4C8	960 aa	Known RBP	31.35	■■■□□ 2.61
ARL6IP4-218	ENST00000540708	FKBP5	Q13451	457 aa	Predicted RBP	31.33	■■■□□ 2.61
ARL6IP4-218	ENST00000540708	CCT4	P50991	539 aa	Known RBP	31.33	■■■□□ 2.61
ARL6IP4-218	ENST00000540708	CABP4	P57796	275 aa		31.32	■■■□□ 2.6
ARL6IP4-218	ENST00000540708	NKX1-1	Q15270	411 aa	Predicted RBP	31.31	■■■□□ 2.6
ARL6IP4-218	ENST00000540708	USP35	Q9P2H5	1018 aa		31.31	■■■□□ 2.6
ARL6IP4-218	ENST00000540708		F6X3S4	739 aa		31.29	■■■□□ 2.6
ARL6IP4-218	ENST00000540708	SLC39A6	Q13433	755 aa		31.29	■■■□□ 2.6
ARL6IP4-218	ENST00000540708	SLC4A10	Q6U841	1118 aa		31.29	■■■□□ 2.6
ARL6IP4-218	ENST00000540708	AEBP2	Q6ZN18	517 aa	Predicted RBP	31.29	■■■□□ 2.6
ARL6IP4-218	ENST00000540708	CHPF2	Q9P2E5	772 aa		31.29	■■■□□ 2.6
ARL6IP4-218	ENST00000540708	SHANK3	Q9BYB0	1731 aa		31.29	■■■□□ 2.6
ARL6IP4-218	ENST00000540708	DBF4	Q9UBU7	674 aa	Predicted RBP	31.28	■■■□□ 2.6
ARL6IP4-218	ENST00000540708	ADAMTS2	O95450	1211 aa		31.28	■■■□□ 2.6
ARL6IP4-218	ENST00000540708	TTC5	Q8N0Z6	440 aa		31.28	■■■□□ 2.6
ARL6IP4-218	ENST00000540708	PLCH1	Q4KWH8	1693 aa		31.27	■■■□□ 2.6
ARL6IP4-218	ENST00000540708	ERVV-2	B6SEH9	535 aa		31.27	■■■□□ 2.6
ARL6IP4-218	ENST00000540708	RGS3	P49796	1198 aa		31.27	■■■□□ 2.6
ARL6IP4-218	ENST00000540708	DDX54	Q8TDD1	881 aa	Known RBP	31.27	■■■□□ 2.6
ARL6IP4-218	ENST00000540708	C1orf115	Q9H7X2	142 aa		31.27	■■■□□ 2.6
ARL6IP4-218	ENST00000540708	PXDNL	A1KZ92	1463 aa		31.26	■■■□□ 2.59
ARL6IP4-218	ENST00000540708	PHAX	Q9H814	394 aa	Known RBP	31.25	■■■□□ 2.59
ARL6IP4-218	ENST00000540708	PDZRN3	Q9UPQ7	1066 aa		31.25	■■■□□ 2.59
ARL6IP4-218	ENST00000540708	DISP2	A7MBM2	1401 aa		31.24	■■■□□ 2.59
ARL6IP4-218	ENST00000540708	SMC5	Q8IY18	1101 aa		31.24	■■■□□ 2.59
ARL6IP4-218	ENST00000540708	NUTM2B	A6NNL0	878 aa	Predicted RBP	31.22	■■■□□ 2.59
ARL6IP4-218	ENST00000540708	NUTM2E	B1AL46	878 aa	Predicted RBP	31.22	■■■□□ 2.59
ARL6IP4-218	ENST00000540708	NUTM2A	Q8IVF1	878 aa	Predicted RBP	31.22	■■■□□ 2.59
ARL6IP4-218	ENST00000540708	ZNF496	Q96IT1	587 aa	Predicted RBP	31.22	■■■□□ 2.59
ARL6IP4-218	ENST00000540708	PRAMEF22	A3QJZ6	481 aa		31.21	■■■□□ 2.59
ARL6IP4-218	ENST00000540708	FMNL2	Q96PY5	1086 aa		31.21	■■■□□ 2.59
ARL6IP4-218	ENST00000540708	MEIS3	Q99687	375 aa		31.2	■■■□□ 2.59
ARL6IP4-218	ENST00000540708	N4BP2	Q86UW6	1770 aa	Predicted RBP	31.2	■■■□□ 2.59
ARL6IP4-218	ENST00000540708	NRAP	Q86VF7	1730 aa		31.19	■■■□□ 2.58
ARL6IP4-218	ENST00000540708	SNRPA1	P09661	255 aa	Known RBP	31.19	■■■□□ 2.58
ARL6IP4-218	ENST00000540708	PDE4A	P27815	886 aa		31.19	■■■□□ 2.58
ARL6IP4-218	ENST00000540708	HYPK	Q9NX55	129 aa		31.19	■■■□□ 2.58
ARL6IP4-218	ENST00000540708	C5	P01031	1676 aa		31.18	■■■□□ 2.58
ARL6IP4-218	ENST00000540708	SIRT2	Q8IXJ6	389 aa		31.17	■■■□□ 2.58
ARL6IP4-218	ENST00000540708	RPAP2	Q8IXW5	612 aa	Predicted RBP	31.17	■■■□□ 2.58
ARL6IP4-218	ENST00000540708	GCC1	Q96CN9	775 aa		31.17	■■■□□ 2.58
ARL6IP4-218	ENST00000540708	DDX21	Q9NR30	783 aa	Known RBP eCLIP	31.17	■■■□□ 2.58
ARL6IP4-218	ENST00000540708	ANXA1	P04083	346 aa		31.17	■■■□□ 2.58
ARL6IP4-218	ENST00000540708	BACH2	Q9BYV9	841 aa		31.15	■■■□□ 2.58
ARL6IP4-218	ENST00000540708	NWD2	Q9ULI1	1742 aa		31.15	■■■□□ 2.58
ARL6IP4-218	ENST00000540708	WNK3	Q9BYP7	1800 aa		31.15	■■■□□ 2.58
ARL6IP4-218	ENST00000540708	GNAI3	P08754	354 aa		31.15	■■■□□ 2.58
ARL6IP4-218	ENST00000540708	ANKRD44	Q8N8A2	993 aa		31.15	■■■□□ 2.58
ARL6IP4-218	ENST00000540708	CERK	Q8TCT0	537 aa		31.15	■■■□□ 2.58
ARL6IP4-218	ENST00000540708	CDCA7	Q9BWT1	371 aa	Predicted RBP	31.15	■■■□□ 2.58
ARL6IP4-218	ENST00000540708	THRAP3	Q9Y2W1	955 aa	Known RBP	31.15	■■■□□ 2.58
ARL6IP4-218	ENST00000540708	JCAD	Q9P266	1359 aa		31.15	■■■□□ 2.58
ARL6IP4-218	ENST00000540708	ATP10D	Q9P241	1426 aa		31.15	■■■□□ 2.58
ARL6IP4-218	ENST00000540708	PROSER3	Q2NL68	480 aa		31.14	■■■□□ 2.58
ARL6IP4-218	ENST00000540708	DNAAF4	Q8WXU2	420 aa		31.14	■■■□□ 2.58
ARL6IP4-218	ENST00000540708	SPATA31A1	Q5TZJ5	1347 aa		31.13	■■■□□ 2.57
ARL6IP4-218	ENST00000540708	PI4KAP2	A4QPH2	592 aa		31.12	■■■□□ 2.57
ARL6IP4-218	ENST00000540708	EXOC5	O00471	708 aa		31.12	■■■□□ 2.57
ARL6IP4-218	ENST00000540708	PI4KAP1	Q8N8J0	262 aa		31.12	■■■□□ 2.57

Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms