RNA–Protein interactions for RNA: ENST00000540704.1

NPIPB5-218, Transcript of nuclear pore complex interacting protein family member B5, human

TSL 5

Gene NPIPB5, Length 631 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB5-218	ENST00000540704	NLGN2	Q8NFZ4	835 aa		10.92	□□□□□ -0.66
NPIPB5-218	ENST00000540704	TMOD3	Q9NYL9	352 aa		10.92	□□□□□ -0.66
NPIPB5-218	ENST00000540704	KDM6A	O15550	1401 aa	Predicted RBP	10.92	□□□□□ -0.66
NPIPB5-218	ENST00000540704	MTHFS	P49914	203 aa		10.91	□□□□□ -0.66
NPIPB5-218	ENST00000540704	AMOT	Q4VCS5	1084 aa		10.91	□□□□□ -0.66
NPIPB5-218	ENST00000540704	SULT6B1	Q6IMI4	303 aa		10.91	□□□□□ -0.66
NPIPB5-218	ENST00000540704	DCAF5	Q96JK2	942 aa		10.91	□□□□□ -0.66
NPIPB5-218	ENST00000540704	CHD4	Q14839	1912 aa		10.91	□□□□□ -0.66
NPIPB5-218	ENST00000540704	HSP90AB1	P08238	724 aa	Known RBP	10.9	□□□□□ -0.66
NPIPB5-218	ENST00000540704	MSL1	Q68DK7	614 aa		10.9	□□□□□ -0.66
NPIPB5-218	ENST00000540704	UTRN	P46939	3433 aa		10.89	□□□□□ -0.67
NPIPB5-218	ENST00000540704	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	10.89	□□□□□ -0.67
NPIPB5-218	ENST00000540704	SSFA2	P28290	1259 aa		10.89	□□□□□ -0.67
NPIPB5-218	ENST00000540704	ATP6V1A	P38606	617 aa		10.89	□□□□□ -0.67
NPIPB5-218	ENST00000540704	ZNF530	Q6P9A1	599 aa	Predicted RBP	10.89	□□□□□ -0.67
NPIPB5-218	ENST00000540704	NPC1L1	Q9UHC9	1359 aa		10.89	□□□□□ -0.67
NPIPB5-218	ENST00000540704	ZNF831	Q5JPB2	1677 aa		10.89	□□□□□ -0.67
NPIPB5-218	ENST00000540704	MYH14	Q7Z406	1995 aa	Known RBP	10.88	□□□□□ -0.67
NPIPB5-218	ENST00000540704	RC3H1	Q5TC82	1133 aa	Known RBP	10.88	□□□□□ -0.67
NPIPB5-218	ENST00000540704	ZNF784	Q8NCA9	323 aa	Predicted RBP	10.88	□□□□□ -0.67
NPIPB5-218	ENST00000540704	AK7	Q96M32	723 aa		10.88	□□□□□ -0.67
NPIPB5-218	ENST00000540704	CD2AP	Q9Y5K6	639 aa		10.88	□□□□□ -0.67
NPIPB5-218	ENST00000540704	YBX3	P16989	372 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
NPIPB5-218	ENST00000540704	NFATC2IP	Q8NCF5	419 aa		10.87	□□□□□ -0.67
NPIPB5-218	ENST00000540704	LGR6	Q9HBX8	967 aa		10.87	□□□□□ -0.67
NPIPB5-218	ENST00000540704	CABP4	P57796	275 aa		10.86	□□□□□ -0.67
NPIPB5-218	ENST00000540704	GPR162	Q16538	588 aa		10.86	□□□□□ -0.67
NPIPB5-218	ENST00000540704	CC2D1B	Q5T0F9	858 aa	Known RBP	10.86	□□□□□ -0.67
NPIPB5-218	ENST00000540704	SCN11A	Q9UI33	1791 aa		10.85	□□□□□ -0.67
NPIPB5-218	ENST00000540704	GNPAT	O15228	680 aa		10.85	□□□□□ -0.67
NPIPB5-218	ENST00000540704	RPS6KA4	O75676	772 aa		10.85	□□□□□ -0.67
NPIPB5-218	ENST00000540704	PHF14	O94880	888 aa		10.85	□□□□□ -0.67
NPIPB5-218	ENST00000540704	HOXD11	P31277	338 aa	Predicted RBP	10.85	□□□□□ -0.67
NPIPB5-218	ENST00000540704	AKAP4	Q5JQC9	854 aa		10.85	□□□□□ -0.67
NPIPB5-218	ENST00000540704	KLHL34	Q8N239	644 aa		10.85	□□□□□ -0.67
NPIPB5-218	ENST00000540704	ARHGEF1	Q92888	912 aa	Known RBP	10.85	□□□□□ -0.67
NPIPB5-218	ENST00000540704	CNTNAP4	Q9C0A0	1308 aa		10.84	□□□□□ -0.67
NPIPB5-218	ENST00000540704	COL5A3	P25940	1745 aa	Predicted RBP	10.84	□□□□□ -0.67
NPIPB5-218	ENST00000540704	RNMT	O43148	476 aa	Known RBP	10.84	□□□□□ -0.67
NPIPB5-218	ENST00000540704	DIAPH1	O60610	1272 aa	Known RBP	10.84	□□□□□ -0.67
NPIPB5-218	ENST00000540704	HMOX1	P09601	288 aa		10.84	□□□□□ -0.67
NPIPB5-218	ENST00000540704	KCNA4	P22459	653 aa		10.84	□□□□□ -0.67
NPIPB5-218	ENST00000540704	MTHFSD	Q2M296	383 aa	Known RBP	10.84	□□□□□ -0.67
NPIPB5-218	ENST00000540704	C1orf141	Q5JVX7	400 aa		10.84	□□□□□ -0.67
NPIPB5-218	ENST00000540704	RBM42	Q9BTD8	480 aa	Known RBP	10.84	□□□□□ -0.67
NPIPB5-218	ENST00000540704	COL3A1	P02461	1466 aa	Predicted RBP	10.84	□□□□□ -0.67
NPIPB5-218	ENST00000540704	TRAPPC3L	Q5T215	181 aa		10.83	□□□□□ -0.68
NPIPB5-218	ENST00000540704	SLC52A2	Q9HAB3	445 aa		10.83	□□□□□ -0.68
NPIPB5-218	ENST00000540704	RTCB	Q9Y3I0	505 aa	Known RBP	10.83	□□□□□ -0.68
NPIPB5-218	ENST00000540704	ADAMTS7	Q9UKP4	1686 aa		10.82	□□□□□ -0.68
NPIPB5-218	ENST00000540704	GRIN3B	O60391	1043 aa		10.82	□□□□□ -0.68
NPIPB5-218	ENST00000540704	PTCD1	O75127	700 aa	Known RBP	10.82	□□□□□ -0.68
NPIPB5-218	ENST00000540704	GYS1	P13807	737 aa		10.82	□□□□□ -0.68
NPIPB5-218	ENST00000540704	NCBP3	Q53F19	620 aa	Known RBP	10.82	□□□□□ -0.68
NPIPB5-218	ENST00000540704	INTS5	Q6P9B9	1019 aa	Known RBP	10.82	□□□□□ -0.68
NPIPB5-218	ENST00000540704	CIC	Q96RK0	1608 aa	Predicted RBP	10.81	□□□□□ -0.68
NPIPB5-218	ENST00000540704	MMP10	P09238	476 aa		10.81	□□□□□ -0.68
NPIPB5-218	ENST00000540704	CRKL	P46109	303 aa	Known RBP	10.81	□□□□□ -0.68
NPIPB5-218	ENST00000540704	NLGN1	Q8N2Q7	840 aa		10.81	□□□□□ -0.68
NPIPB5-218	ENST00000540704	VIRMA	Q69YN4	1812 aa	Known RBP	10.81	□□□□□ -0.68
NPIPB5-218	ENST00000540704	TJP1	Q07157	1748 aa		10.81	□□□□□ -0.68
NPIPB5-218	ENST00000540704	MRC1	P22897	1456 aa		10.81	□□□□□ -0.68
NPIPB5-218	ENST00000540704	GOLGB1	Q14789	3259 aa	Known RBP	10.8	□□□□□ -0.68
NPIPB5-218	ENST00000540704	KIF13B	Q9NQT8	1826 aa		10.8	□□□□□ -0.68
NPIPB5-218	ENST00000540704	ZNF316	A6NFI3	1004 aa	Predicted RBP	10.8	□□□□□ -0.68
NPIPB5-218	ENST00000540704	SLC39A6	Q13433	755 aa		10.8	□□□□□ -0.68
NPIPB5-218	ENST00000540704	DNAJC10	Q8IXB1	793 aa		10.8	□□□□□ -0.68
NPIPB5-218	ENST00000540704	IL17RE	Q8NFR9	667 aa		10.8	□□□□□ -0.68
NPIPB5-218	ENST00000540704	RNF216	Q9NWF9	866 aa	Predicted RBP	10.8	□□□□□ -0.68
NPIPB5-218	ENST00000540704	KIAA1551	Q9HCM1	1747 aa		10.79	□□□□□ -0.68
NPIPB5-218	ENST00000540704	NPM3	O75607	178 aa	Known RBP	10.79	□□□□□ -0.68
NPIPB5-218	ENST00000540704	CYP19A1	P11511	503 aa	Predicted RBP	10.79	□□□□□ -0.68
NPIPB5-218	ENST00000540704	PELP1	Q8IZL8	1130 aa	Known RBP	10.79	□□□□□ -0.68
NPIPB5-218	ENST00000540704	KCNA3	P22001	575 aa		10.78	□□□□□ -0.68
NPIPB5-218	ENST00000540704	TM4SF1	P30408	202 aa		10.78	□□□□□ -0.68
NPIPB5-218	ENST00000540704	FKBP8	Q14318	412 aa		10.78	□□□□□ -0.68
NPIPB5-218	ENST00000540704	PHACTR3	Q96KR7	559 aa		10.78	□□□□□ -0.68
NPIPB5-218	ENST00000540704	SRP68	Q9UHB9	627 aa	Known RBP	10.78	□□□□□ -0.68
NPIPB5-218	ENST00000540704	KCP	Q6ZWJ8	1503 aa		10.78	□□□□□ -0.68
NPIPB5-218	ENST00000540704	PPP2R1A	P30153	589 aa		10.77	□□□□□ -0.69
NPIPB5-218	ENST00000540704	RFC4	P35249	363 aa		10.77	□□□□□ -0.69
NPIPB5-218	ENST00000540704	TGFB2	P61812	414 aa		10.77	□□□□□ -0.69
NPIPB5-218	ENST00000540704	CNGB1	Q14028	1251 aa	Predicted RBP	10.77	□□□□□ -0.69
NPIPB5-218	ENST00000540704	VSIG10	Q8N0Z9	540 aa		10.77	□□□□□ -0.69
NPIPB5-218	ENST00000540704	RSPH6A	Q9H0K4	717 aa		10.77	□□□□□ -0.69
NPIPB5-218	ENST00000540704	C4A	P0C0L4	1744 aa		10.77	□□□□□ -0.69
NPIPB5-218	ENST00000540704	SOS1	Q07889	1333 aa	Predicted RBP	10.77	□□□□□ -0.69
NPIPB5-218	ENST00000540704	USP42	Q9H9J4	1324 aa	Known RBP	10.77	□□□□□ -0.69
NPIPB5-218	ENST00000540704	PXDNL	A1KZ92	1463 aa		10.76	□□□□□ -0.69
NPIPB5-218	ENST00000540704	DDR1	Q08345	913 aa		10.76	□□□□□ -0.69
NPIPB5-218	ENST00000540704	CCDC87	Q9NVE4	849 aa		10.76	□□□□□ -0.69
NPIPB5-218	ENST00000540704	C10orf71	Q711Q0	1435 aa		10.75	□□□□□ -0.69
NPIPB5-218	ENST00000540704		A0A0G2JLW4	131 aa		10.75	□□□□□ -0.69
NPIPB5-218	ENST00000540704	U2SURP	O15042	1029 aa	Known RBP	10.75	□□□□□ -0.69
NPIPB5-218	ENST00000540704	C1QTNF8	P60827	252 aa		10.75	□□□□□ -0.69
NPIPB5-218	ENST00000540704	BCL2L12	Q9HB09	334 aa		10.75	□□□□□ -0.69
NPIPB5-218	ENST00000540704	WWC3	Q9ULE0	1092 aa		10.75	□□□□□ -0.69
NPIPB5-218	ENST00000540704	ADCY9	O60503	1353 aa		10.75	□□□□□ -0.69
NPIPB5-218	ENST00000540704	CEMIP	Q8WUJ3	1361 aa		10.75	□□□□□ -0.69
NPIPB5-218	ENST00000540704	SIPA1L3	O60292	1781 aa	Predicted RBP	10.75	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms