RNA–Protein interactions for RNA: ENST00000540476.5

MDM1-211, Transcript of Mdm1 nuclear protein, humanhuman

TSL 4

Gene MDM1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-211ENST00000540476 LINC00116Q8NCU8 138 aa13.42□□□□□ -0.26
MDM1-211ENST00000540476 TRAPPC3LQ5T215 181 aa13.41□□□□□ -0.26
MDM1-211ENST00000540476 AMIGO3Q86WK7 504 aa13.41□□□□□ -0.26
MDM1-211ENST00000540476 IFNL2Q8IZJ0 200 aa13.41□□□□□ -0.26
MDM1-211ENST00000540476 RTCBQ9Y3I0 505 aaKnown RBP13.41□□□□□ -0.26
MDM1-211ENST00000540476 EMILIN1Q9Y6C2 1016 aa13.41□□□□□ -0.26
MDM1-211ENST00000540476 CCDC87Q9NVE4 849 aa13.4□□□□□ -0.26
MDM1-211ENST00000540476 BCS1LQ9Y276 419 aa13.4□□□□□ -0.26
MDM1-211ENST00000540476 WASHC2AQ641Q2 1341 aa13.39□□□□□ -0.27
MDM1-211ENST00000540476 SAMD1Q6SPF0 538 aaPredicted RBP13.39□□□□□ -0.27
MDM1-211ENST00000540476 C16orf71Q8IYS4 520 aaPredicted RBP13.39□□□□□ -0.27
MDM1-211ENST00000540476 ASAP1Q9ULH1 1129 aa13.39□□□□□ -0.27
MDM1-211ENST00000540476 PLEKHG2Q9H7P9 1386 aa13.38□□□□□ -0.27
MDM1-211ENST00000540476 HSP90AB1P08238 724 aaKnown RBP13.38□□□□□ -0.27
MDM1-211ENST00000540476 PHKG2P15735 406 aa13.38□□□□□ -0.27
MDM1-211ENST00000540476 ITPK1Q13572 414 aa13.38□□□□□ -0.27
MDM1-211ENST00000540476 ARHGAP27Q6ZUM4 889 aa13.38□□□□□ -0.27
MDM1-211ENST00000540476 SMIM5Q71RC9 77 aa13.38□□□□□ -0.27
MDM1-211ENST00000540476 PARP3Q9Y6F1 533 aa13.38□□□□□ -0.27
MDM1-211ENST00000540476 RGPD2P0DJD1 1756 aa13.37□□□□□ -0.27
MDM1-211ENST00000540476 RFC4P35249 363 aa13.37□□□□□ -0.27
MDM1-211ENST00000540476 EYA1Q99502 592 aa13.37□□□□□ -0.27
MDM1-211ENST00000540476 NCAPD2Q15021 1401 aa13.37□□□□□ -0.27
MDM1-211ENST00000540476 PXDNLA1KZ92 1463 aa13.36□□□□□ -0.27
MDM1-211ENST00000540476 A0A0G2JLW4 131 aa13.36□□□□□ -0.27
MDM1-211ENST00000540476 FCHSD2O94868 740 aa13.36□□□□□ -0.27
MDM1-211ENST00000540476 RC3H1Q5TC82 1133 aaKnown RBP13.36□□□□□ -0.27
MDM1-211ENST00000540476 RBM42Q9BTD8 480 aaKnown RBP13.36□□□□□ -0.27
MDM1-211ENST00000540476 ATG3Q9NT62 314 aa13.36□□□□□ -0.27
MDM1-211ENST00000540476 ERVV-2B6SEH9 535 aa13.35□□□□□ -0.27
MDM1-211ENST00000540476 RBM46Q8TBY0 533 aaKnown RBP13.35□□□□□ -0.27
MDM1-211ENST00000540476 CICQ96RK0 1608 aaPredicted RBP13.35□□□□□ -0.27
MDM1-211ENST00000540476 TAF1LQ8IZX4 1826 aa13.34□□□□□ -0.27
MDM1-211ENST00000540476 C10orf71Q711Q0 1435 aa13.34□□□□□ -0.27
MDM1-211ENST00000540476 RPS6KA4O75676 772 aa13.34□□□□□ -0.27
MDM1-211ENST00000540476 ARHGEF1Q92888 912 aaKnown RBP13.34□□□□□ -0.27
MDM1-211ENST00000540476 DCAF5Q96JK2 942 aa13.34□□□□□ -0.27
MDM1-211ENST00000540476 CARD14Q9BXL6 1004 aa13.34□□□□□ -0.27
MDM1-211ENST00000540476 KDM2BQ8NHM5 1336 aa13.34□□□□□ -0.27
MDM1-211ENST00000540476 CNTNAP4Q9C0A0 1308 aa13.34□□□□□ -0.27
MDM1-211ENST00000540476 PKD1L3Q7Z443 1732 aa13.33□□□□□ -0.27
MDM1-211ENST00000540476 DPEP1P16444 411 aa13.33□□□□□ -0.28
MDM1-211ENST00000540476 C1QBPQ07021 282 aaKnown RBP13.33□□□□□ -0.28
MDM1-211ENST00000540476 FSTL1Q12841 308 aa13.33□□□□□ -0.28
MDM1-211ENST00000540476 NMRK2Q9NPI5 230 aa13.33□□□□□ -0.28
MDM1-211ENST00000540476 PIM2Q9P1W9 311 aa13.33□□□□□ -0.28
MDM1-211ENST00000540476 UBR3Q6ZT12 1888 aa13.33□□□□□ -0.28
MDM1-211ENST00000540476 TOGARAM1Q9Y4F4 1720 aa13.33□□□□□ -0.28
MDM1-211ENST00000540476 GYS1P13807 737 aa13.32□□□□□ -0.28
MDM1-211ENST00000540476 CABP4P57796 275 aa13.32□□□□□ -0.28
MDM1-211ENST00000540476 PLEKHO1Q53GL0 409 aaPredicted RBP13.32□□□□□ -0.28
MDM1-211ENST00000540476 C9orf131Q5VYM1 1079 aa13.32□□□□□ -0.28
MDM1-211ENST00000540476 DNAJC5GQ8N7S2 189 aa13.32□□□□□ -0.28
MDM1-211ENST00000540476 POLKQ9UBT6 870 aa13.32□□□□□ -0.28
MDM1-211ENST00000540476 KDRP35968 1356 aa13.32□□□□□ -0.28
MDM1-211ENST00000540476 AMOTQ4VCS5 1084 aa13.31□□□□□ -0.28
MDM1-211ENST00000540476 DALRD3Q5D0E6 543 aaKnown RBP13.31□□□□□ -0.28
MDM1-211ENST00000540476 EIF4A2Q14240 407 aaKnown RBP13.3□□□□□ -0.28
MDM1-211ENST00000540476 KLRG1Q96E93 195 aa13.3□□□□□ -0.28
MDM1-211ENST00000540476 ITGB4P16144 1822 aa13.29□□□□□ -0.28
MDM1-211ENST00000540476 KIF20BQ96Q89 1820 aa13.29□□□□□ -0.28
MDM1-211ENST00000540476 C1orf141Q5JVX7 400 aa13.29□□□□□ -0.28
MDM1-211ENST00000540476 RNF181Q9P0P0 153 aa13.29□□□□□ -0.28
MDM1-211ENST00000540476 MAP2P11137 1827 aaKnown RBP13.28□□□□□ -0.28
MDM1-211ENST00000540476 TNNT2P45379 298 aaPredicted RBP13.28□□□□□ -0.28
MDM1-211ENST00000540476 MTHFSP49914 203 aa13.28□□□□□ -0.28
MDM1-211ENST00000540476 ZNF530Q6P9A1 599 aaPredicted RBP13.28□□□□□ -0.28
MDM1-211ENST00000540476 SLC4A9Q96Q91 983 aa13.28□□□□□ -0.28
MDM1-211ENST00000540476 PTCD1O75127 700 aaKnown RBP13.27□□□□□ -0.29
MDM1-211ENST00000540476 ATXN8OSP0DMR3 200 aa13.27□□□□□ -0.29
MDM1-211ENST00000540476 CRKLP46109 303 aaKnown RBP13.27□□□□□ -0.29
MDM1-211ENST00000540476 KCNA3P22001 575 aa13.26□□□□□ -0.29
MDM1-211ENST00000540476 JMYQ8N9B5 988 aa13.26□□□□□ -0.29
MDM1-211ENST00000540476 SMC1BQ8NDV3 1235 aa13.26□□□□□ -0.29
MDM1-211ENST00000540476 USP42Q9H9J4 1324 aaKnown RBP13.26□□□□□ -0.29
MDM1-211ENST00000540476 ZC3H4Q9UPT8 1303 aaKnown RBP13.26□□□□□ -0.29
MDM1-211ENST00000540476 ZPR1O75312 459 aa13.25□□□□□ -0.29
MDM1-211ENST00000540476 POLR3GLQ9BT43 218 aa13.25□□□□□ -0.29
MDM1-211ENST00000540476 RRAGCQ9HB90 399 aa13.25□□□□□ -0.29
MDM1-211ENST00000540476 C4AP0C0L4 1744 aa13.25□□□□□ -0.29
MDM1-211ENST00000540476 FKBP8Q14318 412 aa13.24□□□□□ -0.29
MDM1-211ENST00000540476 NFATC2IPQ8NCF5 419 aa13.24□□□□□ -0.29
MDM1-211ENST00000540476 TIMELESSQ9UNS1 1208 aa13.24□□□□□ -0.29
MDM1-211ENST00000540476 KIF13BQ9NQT8 1826 aa13.23□□□□□ -0.29
MDM1-211ENST00000540476 ANKRD26Q9UPS8 1709 aa13.23□□□□□ -0.29
MDM1-211ENST00000540476 TNS4Q8IZW8 715 aa13.23□□□□□ -0.29
MDM1-211ENST00000540476 SRP68Q9UHB9 627 aaKnown RBP13.23□□□□□ -0.29
MDM1-211ENST00000540476 ZNF831Q5JPB2 1677 aa13.23□□□□□ -0.29
MDM1-211ENST00000540476 KCPQ6ZWJ8 1503 aa13.23□□□□□ -0.29
MDM1-211ENST00000540476 CHRNA5P30532 468 aa13.22□□□□□ -0.29
MDM1-211ENST00000540476 HTRA3P83110 453 aa13.22□□□□□ -0.29
MDM1-211ENST00000540476 DDR1Q08345 913 aa13.22□□□□□ -0.29
MDM1-211ENST00000540476 COL13A1Q5TAT6 717 aaPredicted RBP13.22□□□□□ -0.29
MDM1-211ENST00000540476 KDM6AO15550 1401 aaPredicted RBP13.22□□□□□ -0.29
MDM1-211ENST00000540476 POLRMTO00411 1230 aaKnown RBP13.21□□□□□ -0.29
MDM1-211ENST00000540476 VEGFAP15692 232 aaPredicted RBP13.21□□□□□ -0.29
MDM1-211ENST00000540476 LMNB1P20700 586 aa13.21□□□□□ -0.29
MDM1-211ENST00000540476 N4BP2Q86UW6 1770 aaPredicted RBP13.2□□□□□ -0.3
MDM1-211ENST00000540476 KIAA1551Q9HCM1 1747 aa13.2□□□□□ -0.3
MDM1-211ENST00000540476 TM4SF1P30408 202 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms