RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 WWC3Q9ULE0 1092 aa17.17■□□□□ 0.34
COPS7A-211ENST00000540408 PLEKHG2Q9H7P9 1386 aa17.16■□□□□ 0.34
COPS7A-211ENST00000540408 UBR3Q6ZT12 1888 aa17.16■□□□□ 0.34
COPS7A-211ENST00000540408 ERVV-2B6SEH9 535 aa17.16■□□□□ 0.34
COPS7A-211ENST00000540408 PLEKHO1Q53GL0 409 aaPredicted RBP17.16■□□□□ 0.34
COPS7A-211ENST00000540408 NLGN1Q8N2Q7 840 aa17.16■□□□□ 0.34
COPS7A-211ENST00000540408 RBM42Q9BTD8 480 aaKnown RBP17.16■□□□□ 0.34
COPS7A-211ENST00000540408 MAP2P11137 1827 aaKnown RBP17.16■□□□□ 0.34
COPS7A-211ENST00000540408 MMP10P09238 476 aa17.15■□□□□ 0.34
COPS7A-211ENST00000540408 DCAF5Q96JK2 942 aa17.15■□□□□ 0.34
COPS7A-211ENST00000540408 ANKRD26Q9UPS8 1709 aa17.14■□□□□ 0.33
COPS7A-211ENST00000540408 TGFB2P61812 414 aa17.14■□□□□ 0.33
COPS7A-211ENST00000540408 ADRA2BP18089 450 aa17.13■□□□□ 0.33
COPS7A-211ENST00000540408 RFC4P35249 363 aa17.13■□□□□ 0.33
COPS7A-211ENST00000540408 CABP4P57796 275 aa17.13■□□□□ 0.33
COPS7A-211ENST00000540408 AMOTQ4VCS5 1084 aa17.13■□□□□ 0.33
COPS7A-211ENST00000540408 RC3H1Q5TC82 1133 aaKnown RBP17.13■□□□□ 0.33
COPS7A-211ENST00000540408 CLSPNQ9HAW4 1339 aa17.13■□□□□ 0.33
COPS7A-211ENST00000540408 ADCY9O60503 1353 aa17.13■□□□□ 0.33
COPS7A-211ENST00000540408 HSPA6P17066 643 aa17.11■□□□□ 0.33
COPS7A-211ENST00000540408 EIF4G2P78344 907 aaKnown RBP eCLIP17.11■□□□□ 0.33
COPS7A-211ENST00000540408 C1orf141Q5JVX7 400 aa17.11■□□□□ 0.33
COPS7A-211ENST00000540408 CCDC87Q9NVE4 849 aa17.11■□□□□ 0.33
COPS7A-211ENST00000540408 RPS6KA4O75676 772 aa17.1■□□□□ 0.33
COPS7A-211ENST00000540408 MTHFSP49914 203 aa17.1■□□□□ 0.33
COPS7A-211ENST00000540408 ZNF530Q6P9A1 599 aaPredicted RBP17.1■□□□□ 0.33
COPS7A-211ENST00000540408 ARHGEF1Q92888 912 aaKnown RBP17.1■□□□□ 0.33
COPS7A-211ENST00000540408 PANK3Q9H999 370 aa17.1■□□□□ 0.33
COPS7A-211ENST00000540408 BCS1LQ9Y276 419 aa17.1■□□□□ 0.33
COPS7A-211ENST00000540408 PARP3Q9Y6F1 533 aa17.1■□□□□ 0.33
COPS7A-211ENST00000540408 PCGF6Q9BYE7 350 aa17.09■□□□□ 0.33
COPS7A-211ENST00000540408 CNTNAP4Q9C0A0 1308 aa17.09■□□□□ 0.33
COPS7A-211ENST00000540408 KDRP35968 1356 aa17.08■□□□□ 0.32
COPS7A-211ENST00000540408 A0A0G2JLW4 131 aa17.08■□□□□ 0.32
COPS7A-211ENST00000540408 MORC1Q86VD1 984 aa17.08■□□□□ 0.32
COPS7A-211ENST00000540408 SLC4A9Q96Q91 983 aa17.08■□□□□ 0.32
COPS7A-211ENST00000540408 IFFO2Q5TF58 517 aa17.07■□□□□ 0.32
COPS7A-211ENST00000540408 ARHGAP27Q6ZUM4 889 aa17.07■□□□□ 0.32
COPS7A-211ENST00000540408 PTCD1O75127 700 aaKnown RBP17.06■□□□□ 0.32
COPS7A-211ENST00000540408 FCHSD2O94868 740 aa17.06■□□□□ 0.32
COPS7A-211ENST00000540408 GYS1P13807 737 aa17.06■□□□□ 0.32
COPS7A-211ENST00000540408 PXDNLA1KZ92 1463 aa17.05■□□□□ 0.32
COPS7A-211ENST00000540408 NFATC2IPQ8NCF5 419 aa17.05■□□□□ 0.32
COPS7A-211ENST00000540408 CICQ96RK0 1608 aaPredicted RBP17.05■□□□□ 0.32
COPS7A-211ENST00000540408 KIF3CO14782 793 aa17.04■□□□□ 0.32
COPS7A-211ENST00000540408 HSPA5P11021 654 aaKnown RBP17.04■□□□□ 0.32
COPS7A-211ENST00000540408 DPEP1P16444 411 aa17.04■□□□□ 0.32
COPS7A-211ENST00000540408 KNSTRNQ9Y448 316 aa17.04■□□□□ 0.32
COPS7A-211ENST00000540408 ZNF831Q5JPB2 1677 aa17.04■□□□□ 0.32
COPS7A-211ENST00000540408 TOMM70O94826 608 aa17.03■□□□□ 0.32
COPS7A-211ENST00000540408 SULT6B1Q6IMI4 303 aa17.03■□□□□ 0.32
COPS7A-211ENST00000540408 C10orf71Q711Q0 1435 aa17.03■□□□□ 0.32
COPS7A-211ENST00000540408 CRKLP46109 303 aaKnown RBP17.02■□□□□ 0.32
COPS7A-211ENST00000540408 AEBP1Q8IUX7 1158 aa17.02■□□□□ 0.32
COPS7A-211ENST00000540408 PIM2Q9P1W9 311 aa17.02■□□□□ 0.32
COPS7A-211ENST00000540408 KDM6AO15550 1401 aaPredicted RBP17.02■□□□□ 0.31
COPS7A-211ENST00000540408 KIF13BQ9NQT8 1826 aa17.01■□□□□ 0.31
COPS7A-211ENST00000540408 APLP1P51693 650 aa17.01■□□□□ 0.31
COPS7A-211ENST00000540408 N4BP2Q86UW6 1770 aaPredicted RBP17■□□□□ 0.31
COPS7A-211ENST00000540408 CEP350Q5VT06 3117 aa16.99■□□□□ 0.31
COPS7A-211ENST00000540408 C4AP0C0L4 1744 aa16.99■□□□□ 0.31
COPS7A-211ENST00000540408 ZPR1O75312 459 aa16.99■□□□□ 0.31
COPS7A-211ENST00000540408 DALRD3Q5D0E6 543 aaKnown RBP16.99■□□□□ 0.31
COPS7A-211ENST00000540408 AKAP4Q5JQC9 854 aa16.99■□□□□ 0.31
COPS7A-211ENST00000540408 C16orf71Q8IYS4 520 aaPredicted RBP16.99■□□□□ 0.31
COPS7A-211ENST00000540408 COL5A3P25940 1745 aaPredicted RBP16.99■□□□□ 0.31
COPS7A-211ENST00000540408 USP42Q9H9J4 1324 aaKnown RBP16.98■□□□□ 0.31
COPS7A-211ENST00000540408 FKBP8Q14318 412 aa16.98■□□□□ 0.31
COPS7A-211ENST00000540408 SRP68Q9UHB9 627 aaKnown RBP16.98■□□□□ 0.31
COPS7A-211ENST00000540408 KCNA3P22001 575 aa16.97■□□□□ 0.31
COPS7A-211ENST00000540408 IL13P35225 146 aa16.97■□□□□ 0.31
COPS7A-211ENST00000540408 C9orf131Q5VYM1 1079 aa16.97■□□□□ 0.31
COPS7A-211ENST00000540408 SLC52A2Q9HAB3 445 aa16.96■□□□□ 0.31
COPS7A-211ENST00000540408 INTS5Q6P9B9 1019 aaKnown RBP16.95■□□□□ 0.3
COPS7A-211ENST00000540408 NMRK2Q9NPI5 230 aa16.95■□□□□ 0.3
COPS7A-211ENST00000540408 KIAA1551Q9HCM1 1747 aa16.95■□□□□ 0.3
COPS7A-211ENST00000540408 KDM2BQ8NHM5 1336 aa16.95■□□□□ 0.3
COPS7A-211ENST00000540408 DDR1Q08345 913 aa16.94■□□□□ 0.3
COPS7A-211ENST00000540408 DNAJC10Q8IXB1 793 aa16.94■□□□□ 0.3
COPS7A-211ENST00000540408 MYH14Q7Z406 1995 aaKnown RBP16.94■□□□□ 0.3
COPS7A-211ENST00000540408 POLRMTO00411 1230 aaKnown RBP16.93■□□□□ 0.3
COPS7A-211ENST00000540408 TM4SF1P30408 202 aa16.93■□□□□ 0.3
COPS7A-211ENST00000540408 USPL1Q5W0Q7 1092 aa16.93■□□□□ 0.3
COPS7A-211ENST00000540408 RBM46Q8TBY0 533 aaKnown RBP16.93■□□□□ 0.3
COPS7A-211ENST00000540408 CCER1Q8TC90 406 aaPredicted RBP16.93■□□□□ 0.3
COPS7A-211ENST00000540408 LGR6Q9HBX8 967 aa16.93■□□□□ 0.3
COPS7A-211ENST00000540408 RNF181Q9P0P0 153 aa16.93■□□□□ 0.3
COPS7A-211ENST00000540408 RNMTO43148 476 aaKnown RBP16.92■□□□□ 0.3
COPS7A-211ENST00000540408 CHRNA5P30532 468 aa16.92■□□□□ 0.3
COPS7A-211ENST00000540408 HMOX1P09601 288 aa16.91■□□□□ 0.3
COPS7A-211ENST00000540408 CYP19A1P11511 503 aaPredicted RBP16.91■□□□□ 0.3
COPS7A-211ENST00000540408 NARFQ9UHQ1 456 aa16.91■□□□□ 0.3
COPS7A-211ENST00000540408 FSTL1Q12841 308 aa16.9■□□□□ 0.3
COPS7A-211ENST00000540408 SLC39A6Q13433 755 aa16.9■□□□□ 0.3
COPS7A-211ENST00000540408 AMER1Q5JTC6 1135 aaPredicted RBP16.9■□□□□ 0.3
COPS7A-211ENST00000540408 SOS1Q07889 1333 aaPredicted RBP16.9■□□□□ 0.3
COPS7A-211ENST00000540408 SCN11AQ9UI33 1791 aa16.89■□□□□ 0.3
COPS7A-211ENST00000540408 ARFGEF1Q9Y6D6 1849 aa16.89■□□□□ 0.29
COPS7A-211ENST00000540408 BRCA1P38398 1863 aaKnown RBP16.89■□□□□ 0.29
COPS7A-211ENST00000540408 DIAPH1O60610 1272 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms