RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 ATP6V1AP38606 617 aa19.65■□□□□ 0.74
SEMA4D-222ENST00000540183 GNPATO15228 680 aa19.64■□□□□ 0.73
SEMA4D-222ENST00000540183 SSFA2P28290 1259 aa19.64■□□□□ 0.73
SEMA4D-222ENST00000540183 PANK3Q9H999 370 aa19.64■□□□□ 0.73
SEMA4D-222ENST00000540183 ATP10DQ9P241 1426 aa19.64■□□□□ 0.73
SEMA4D-222ENST00000540183 ZNF831Q5JPB2 1677 aa19.64■□□□□ 0.73
SEMA4D-222ENST00000540183 VIRMAQ69YN4 1812 aaKnown RBP19.64■□□□□ 0.73
SEMA4D-222ENST00000540183 IGSF1Q8N6C5 1336 aa19.63■□□□□ 0.73
SEMA4D-222ENST00000540183 SLC4A9Q96Q91 983 aa19.63■□□□□ 0.73
SEMA4D-222ENST00000540183 C4AP0C0L4 1744 aa19.62■□□□□ 0.73
SEMA4D-222ENST00000540183 KDRP35968 1356 aa19.62■□□□□ 0.73
SEMA4D-222ENST00000540183 KDM6AO15550 1401 aaPredicted RBP19.61■□□□□ 0.73
SEMA4D-222ENST00000540183 HMGB2P26583 209 aaKnown RBP19.61■□□□□ 0.73
SEMA4D-222ENST00000540183 CLSPNQ9HAW4 1339 aa19.6■□□□□ 0.73
SEMA4D-222ENST00000540183 EIF4G2P78344 907 aaKnown RBP eCLIP19.6■□□□□ 0.73
SEMA4D-222ENST00000540183 AEBP1Q8IUX7 1158 aa19.6■□□□□ 0.73
SEMA4D-222ENST00000540183 SCN11AQ9UI33 1791 aa19.6■□□□□ 0.73
SEMA4D-222ENST00000540183 CICQ96RK0 1608 aaPredicted RBP19.59■□□□□ 0.73
SEMA4D-222ENST00000540183 RBM42Q9BTD8 480 aaKnown RBP19.59■□□□□ 0.73
SEMA4D-222ENST00000540183 ZNF526Q8TF50 670 aaPredicted RBP19.58■□□□□ 0.72
SEMA4D-222ENST00000540183 TJP1Q07157 1748 aa19.58■□□□□ 0.72
SEMA4D-222ENST00000540183 BRCA1P38398 1863 aaKnown RBP19.58■□□□□ 0.72
SEMA4D-222ENST00000540183 CEP350Q5VT06 3117 aa19.58■□□□□ 0.72
SEMA4D-222ENST00000540183 ADCY9O60503 1353 aa19.57■□□□□ 0.72
SEMA4D-222ENST00000540183 MMP10P09238 476 aa19.57■□□□□ 0.72
SEMA4D-222ENST00000540183 ZNF530Q6P9A1 599 aaPredicted RBP19.57■□□□□ 0.72
SEMA4D-222ENST00000540183 ERVV-2B6SEH9 535 aa19.56■□□□□ 0.72
SEMA4D-222ENST00000540183 PXDNLA1KZ92 1463 aa19.55■□□□□ 0.72
SEMA4D-222ENST00000540183 PLEKHO1Q53GL0 409 aaPredicted RBP19.55■□□□□ 0.72
SEMA4D-222ENST00000540183 DCAF5Q96JK2 942 aa19.55■□□□□ 0.72
SEMA4D-222ENST00000540183 MORC1Q86VD1 984 aa19.54■□□□□ 0.72
SEMA4D-222ENST00000540183 PLEKHG2Q9H7P9 1386 aa19.54■□□□□ 0.72
SEMA4D-222ENST00000540183 TRAPPC3LQ5T215 181 aa19.53■□□□□ 0.72
SEMA4D-222ENST00000540183 ARHGEF1Q92888 912 aaKnown RBP19.53■□□□□ 0.72
SEMA4D-222ENST00000540183 RTCBQ9Y3I0 505 aaKnown RBP19.53■□□□□ 0.72
SEMA4D-222ENST00000540183 HSP90AB1P08238 724 aaKnown RBP19.52■□□□□ 0.72
SEMA4D-222ENST00000540183 CABP4P57796 275 aa19.52■□□□□ 0.72
SEMA4D-222ENST00000540183 GPBP1L1Q9HC44 474 aaPredicted RBP19.52■□□□□ 0.72
SEMA4D-222ENST00000540183 SULT6B1Q6IMI4 303 aa19.51■□□□□ 0.71
SEMA4D-222ENST00000540183 C10orf71Q711Q0 1435 aa19.51■□□□□ 0.71
SEMA4D-222ENST00000540183 CNTNAP4Q9C0A0 1308 aa19.51■□□□□ 0.71
SEMA4D-222ENST00000540183 ADAMTS7Q9UKP4 1686 aa19.5■□□□□ 0.71
SEMA4D-222ENST00000540183 A0A0G2JLW4 131 aa19.5■□□□□ 0.71
SEMA4D-222ENST00000540183 PTCD1O75127 700 aaKnown RBP19.5■□□□□ 0.71
SEMA4D-222ENST00000540183 GYS1P13807 737 aa19.5■□□□□ 0.71
SEMA4D-222ENST00000540183 MTHFSP49914 203 aa19.5■□□□□ 0.71
SEMA4D-222ENST00000540183 AMOTQ4VCS5 1084 aa19.5■□□□□ 0.71
SEMA4D-222ENST00000540183 RC3H1Q5TC82 1133 aaKnown RBP19.5■□□□□ 0.71
SEMA4D-222ENST00000540183 ARFGEF1Q9Y6D6 1849 aa19.49■□□□□ 0.71
SEMA4D-222ENST00000540183 RPS6KA4O75676 772 aa19.49■□□□□ 0.71
SEMA4D-222ENST00000540183 IL13P35225 146 aa19.49■□□□□ 0.71
SEMA4D-222ENST00000540183 NFATC2IPQ8NCF5 419 aa19.49■□□□□ 0.71
SEMA4D-222ENST00000540183 C1orf141Q5JVX7 400 aa19.48■□□□□ 0.71
SEMA4D-222ENST00000540183 CCER1Q8TC90 406 aaPredicted RBP19.48■□□□□ 0.71
SEMA4D-222ENST00000540183 RFC4P35249 363 aa19.47■□□□□ 0.71
SEMA4D-222ENST00000540183 NLGN1Q8N2Q7 840 aa19.47■□□□□ 0.71
SEMA4D-222ENST00000540183 SRP68Q9UHB9 627 aaKnown RBP19.47■□□□□ 0.71
SEMA4D-222ENST00000540183 DPEP1P16444 411 aa19.46■□□□□ 0.71
SEMA4D-222ENST00000540183 ADRA2BP18089 450 aa19.46■□□□□ 0.71
SEMA4D-222ENST00000540183 CRKLP46109 303 aaKnown RBP19.46■□□□□ 0.71
SEMA4D-222ENST00000540183 BCS1LQ9Y276 419 aa19.46■□□□□ 0.71
SEMA4D-222ENST00000540183 KNSTRNQ9Y448 316 aa19.46■□□□□ 0.71
SEMA4D-222ENST00000540183 AMER1Q5JTC6 1135 aaPredicted RBP19.45■□□□□ 0.7
SEMA4D-222ENST00000540183 AFDNP55196 1824 aaKnown RBP19.45■□□□□ 0.7
SEMA4D-222ENST00000540183 TGFB2P61812 414 aa19.44■□□□□ 0.7
SEMA4D-222ENST00000540183 KIF3CO14782 793 aa19.43■□□□□ 0.7
SEMA4D-222ENST00000540183 FKBP8Q14318 412 aa19.43■□□□□ 0.7
SEMA4D-222ENST00000540183 LGR6Q9HBX8 967 aa19.43■□□□□ 0.7
SEMA4D-222ENST00000540183 CCDC87Q9NVE4 849 aa19.43■□□□□ 0.7
SEMA4D-222ENST00000540183 PARP3Q9Y6F1 533 aa19.43■□□□□ 0.7
SEMA4D-222ENST00000540183 KIF7Q2M1P5 1343 aa19.43■□□□□ 0.7
SEMA4D-222ENST00000540183 SBF1O95248 1867 aa19.43■□□□□ 0.7
SEMA4D-222ENST00000540183 HMOX1P09601 288 aa19.42■□□□□ 0.7
SEMA4D-222ENST00000540183 DDR1Q08345 913 aa19.42■□□□□ 0.7
SEMA4D-222ENST00000540183 INTS5Q6P9B9 1019 aaKnown RBP19.42■□□□□ 0.7
SEMA4D-222ENST00000540183 MRC1P22897 1456 aa19.41■□□□□ 0.7
SEMA4D-222ENST00000540183 KCNA3P22001 575 aa19.41■□□□□ 0.7
SEMA4D-222ENST00000540183 ARHGAP27Q6ZUM4 889 aa19.41■□□□□ 0.7
SEMA4D-222ENST00000540183 DNAJC10Q8IXB1 793 aa19.41■□□□□ 0.7
SEMA4D-222ENST00000540183 USP42Q9H9J4 1324 aaKnown RBP19.41■□□□□ 0.7
SEMA4D-222ENST00000540183 UBR2Q8IWV8 1755 aa19.41■□□□□ 0.7
SEMA4D-222ENST00000540183 KCPQ6ZWJ8 1503 aa19.41■□□□□ 0.7
SEMA4D-222ENST00000540183 FCHSD2O94868 740 aa19.4■□□□□ 0.7
SEMA4D-222ENST00000540183 SLC39A6Q13433 755 aa19.4■□□□□ 0.7
SEMA4D-222ENST00000540183 AKAP4Q5JQC9 854 aa19.4■□□□□ 0.7
SEMA4D-222ENST00000540183 HSPA6P17066 643 aa19.39■□□□□ 0.69
SEMA4D-222ENST00000540183 SLC52A2Q9HAB3 445 aa19.39■□□□□ 0.69
SEMA4D-222ENST00000540183 RNMTO43148 476 aaKnown RBP19.38■□□□□ 0.69
SEMA4D-222ENST00000540183 CCDC88AQ3V6T2 1871 aa19.37■□□□□ 0.69
SEMA4D-222ENST00000540183 CC2D1BQ5T0F9 858 aaKnown RBP19.37■□□□□ 0.69
SEMA4D-222ENST00000540183 CHRNA5P30532 468 aa19.36■□□□□ 0.69
SEMA4D-222ENST00000540183 CNGB1Q14028 1251 aaPredicted RBP19.36■□□□□ 0.69
SEMA4D-222ENST00000540183 MTHFSDQ2M296 383 aaKnown RBP19.36■□□□□ 0.69
SEMA4D-222ENST00000540183 USPL1Q5W0Q7 1092 aa19.36■□□□□ 0.69
SEMA4D-222ENST00000540183 SIPA1L3O60292 1781 aaPredicted RBP19.36■□□□□ 0.69
SEMA4D-222ENST00000540183 DLEC1Q9Y238 1755 aa19.36■□□□□ 0.69
SEMA4D-222ENST00000540183 NRXN2Q9P2S2 1712 aa19.36■□□□□ 0.69
SEMA4D-222ENST00000540183 SOS1Q07889 1333 aaPredicted RBP19.35■□□□□ 0.69
SEMA4D-222ENST00000540183 POLRMTO00411 1230 aaKnown RBP19.35■□□□□ 0.69
SEMA4D-222ENST00000540183 NMRK2Q9NPI5 230 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms