RNA–Protein interactions for RNA: ENST00000540086.5

CDH19-203, Transcript of cadherin 19, humanhuman

TSL 2 BASIC

Gene CDH19, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-203ENST00000540086 PPP4R2Q9NY27 417 aa8.86□□□□□ -0.99
CDH19-203ENST00000540086 SPATA31A6Q5VVP1 1343 aa8.86□□□□□ -0.99
CDH19-203ENST00000540086 CLUAP1Q96AJ1 413 aa8.86□□□□□ -0.99
CDH19-203ENST00000540086 DCAF5Q96JK2 942 aa8.86□□□□□ -0.99
CDH19-203ENST00000540086 NOB1Q9ULX3 412 aaKnown RBP8.86□□□□□ -0.99
CDH19-203ENST00000540086 SLIT2O94813 1529 aa8.86□□□□□ -0.99
CDH19-203ENST00000540086 LRP6O75581 1613 aa8.85□□□□□ -0.99
CDH19-203ENST00000540086 HSP90AB1P08238 724 aaKnown RBP8.85□□□□□ -0.99
CDH19-203ENST00000540086 RLBP1P12271 317 aa8.85□□□□□ -0.99
CDH19-203ENST00000540086 ZKSCAN2Q63HK3 967 aa8.85□□□□□ -0.99
CDH19-203ENST00000540086 MRPL50Q8N5N7 158 aaKnown RBP8.85□□□□□ -0.99
CDH19-203ENST00000540086 SLC52A2Q9HAB3 445 aa8.85□□□□□ -0.99
CDH19-203ENST00000540086 CCDC9Q9Y3X0 531 aaKnown RBP8.85□□□□□ -0.99
CDH19-203ENST00000540086 DISP2A7MBM2 1401 aa8.85□□□□□ -0.99
CDH19-203ENST00000540086 SPATA31A1Q5TZJ5 1347 aa8.85□□□□□ -0.99
CDH19-203ENST00000540086 KIF16BQ96L93 1317 aa8.85□□□□□ -0.99
CDH19-203ENST00000540086 PDE3AQ14432 1141 aa8.84□□□□□ -0.99
CDH19-203ENST00000540086 B4GALNT3Q6L9W6 998 aa8.84□□□□□ -0.99
CDH19-203ENST00000540086 UNC5CLQ8IV45 518 aa8.84□□□□□ -0.99
CDH19-203ENST00000540086 NFATC2IPQ8NCF5 419 aa8.84□□□□□ -0.99
CDH19-203ENST00000540086 SPATA31A5Q5VU36 1347 aa8.84□□□□□ -0.99
CDH19-203ENST00000540086 SPATA31A7Q8IWB4 1347 aa8.84□□□□□ -0.99
CDH19-203ENST00000540086 TRIM27P14373 513 aa8.84□□□□□ -0.99
CDH19-203ENST00000540086 EIF4A1P60842 406 aaKnown RBP8.84□□□□□ -0.99
CDH19-203ENST00000540086 NECTIN2Q92692 538 aa8.84□□□□□ -0.99
CDH19-203ENST00000540086 COG6Q9Y2V7 657 aa8.84□□□□□ -0.99
CDH19-203ENST00000540086 PLCH1Q4KWH8 1693 aa8.84□□□□□ -1
CDH19-203ENST00000540086 PKD1L3Q7Z443 1732 aa8.83□□□□□ -1
CDH19-203ENST00000540086 CABP4P57796 275 aa8.83□□□□□ -1
CDH19-203ENST00000540086 SLC39A6Q13433 755 aa8.83□□□□□ -1
CDH19-203ENST00000540086 MEX3CQ5U5Q3 659 aaKnown RBP8.83□□□□□ -1
CDH19-203ENST00000540086 ATF7IPQ6VMQ6 1270 aa8.83□□□□□ -1
CDH19-203ENST00000540086 FTSJ3Q8IY81 847 aaKnown RBP8.83□□□□□ -1
CDH19-203ENST00000540086 BCL9LQ86UU0 1499 aa8.83□□□□□ -1
CDH19-203ENST00000540086 IPO8O15397 1037 aaKnown RBP8.82□□□□□ -1
CDH19-203ENST00000540086 BRPF1P55201 1214 aaPredicted RBP8.82□□□□□ -1
CDH19-203ENST00000540086 NKX1-1Q15270 411 aaPredicted RBP8.82□□□□□ -1
CDH19-203ENST00000540086 DZIP1LQ8IYY4 767 aaKnown RBP8.82□□□□□ -1
CDH19-203ENST00000540086 FNBP4Q8N3X1 1017 aaPredicted RBP8.82□□□□□ -1
CDH19-203ENST00000540086 PARP4Q9UKK3 1724 aaKnown RBP8.82□□□□□ -1
CDH19-203ENST00000540086 DCAF8L1A6NGE4 600 aa8.82□□□□□ -1
CDH19-203ENST00000540086 EXOC5O00471 708 aa8.82□□□□□ -1
CDH19-203ENST00000540086 CCDC136Q96JN2 1154 aa8.82□□□□□ -1
CDH19-203ENST00000540086 THRAP3Q9Y2W1 955 aaKnown RBP8.82□□□□□ -1
CDH19-203ENST00000540086 NRAPQ86VF7 1730 aa8.81□□□□□ -1
CDH19-203ENST00000540086 SLC4A2P04920 1241 aa8.81□□□□□ -1
CDH19-203ENST00000540086 VPS72Q15906 364 aa8.81□□□□□ -1
CDH19-203ENST00000540086 HDGFL1Q5TGJ6 251 aa8.81□□□□□ -1
CDH19-203ENST00000540086 ZNF790Q6PG37 636 aa8.81□□□□□ -1
CDH19-203ENST00000540086 CDCA7Q9BWT1 371 aaPredicted RBP8.81□□□□□ -1
CDH19-203ENST00000540086 USP21Q9UK80 565 aa8.81□□□□□ -1
CDH19-203ENST00000540086 MRC1P22897 1456 aa8.81□□□□□ -1
CDH19-203ENST00000540086 ADAMTS7Q9UKP4 1686 aa8.81□□□□□ -1
CDH19-203ENST00000540086 PRAMEF22A3QJZ6 481 aa8.81□□□□□ -1
CDH19-203ENST00000540086 ERVV-2B6SEH9 535 aa8.81□□□□□ -1
CDH19-203ENST00000540086 EIF2S2P20042 333 aaKnown RBP8.81□□□□□ -1
CDH19-203ENST00000540086 FAM98CQ17RN3 349 aaKnown RBP8.81□□□□□ -1
CDH19-203ENST00000540086 CCDC30Q5VVM6 783 aa8.81□□□□□ -1
CDH19-203ENST00000540086 STK31Q9BXU1 1019 aa8.81□□□□□ -1
CDH19-203ENST00000540086 SOS1Q07889 1333 aaPredicted RBP8.8□□□□□ -1
CDH19-203ENST00000540086 GIGYF1O75420 1035 aaPredicted RBP8.8□□□□□ -1
CDH19-203ENST00000540086 MS4A1P11836 297 aa8.8□□□□□ -1
CDH19-203ENST00000540086 MVPQ14764 893 aaKnown RBP8.8□□□□□ -1
CDH19-203ENST00000540086 DDB1Q16531 1140 aa8.8□□□□□ -1
CDH19-203ENST00000540086 BARGINQ6ZT62 677 aa8.8□□□□□ -1
CDH19-203ENST00000540086 G2E3Q7L622 706 aa8.8□□□□□ -1
CDH19-203ENST00000540086 ITPRIPQ8IWB1 547 aa8.8□□□□□ -1
CDH19-203ENST00000540086 TTC5Q8N0Z6 440 aa8.8□□□□□ -1
CDH19-203ENST00000540086 TMEM57Q8N5G2 664 aa8.8□□□□□ -1
CDH19-203ENST00000540086 ARHGAP45Q92619 1136 aa8.8□□□□□ -1
CDH19-203ENST00000540086 ZNF496Q96IT1 587 aaPredicted RBP8.8□□□□□ -1
CDH19-203ENST00000540086 TNS2Q63HR2 1409 aa8.8□□□□□ -1
CDH19-203ENST00000540086 AFF2P51816 1311 aa8.8□□□□□ -1
CDH19-203ENST00000540086 HEG1Q9ULI3 1381 aa8.79□□□□□ -1
CDH19-203ENST00000540086 HOXB7P09629 217 aa8.79□□□□□ -1
CDH19-203ENST00000540086 API5Q9BZZ5 524 aaKnown RBP8.79□□□□□ -1
CDH19-203ENST00000540086 TMOD3Q9NYL9 352 aa8.79□□□□□ -1
CDH19-203ENST00000540086 NWD2Q9ULI1 1742 aa8.78□□□□□ -1
CDH19-203ENST00000540086 ABCC4O15439 1325 aa8.78□□□□□ -1
CDH19-203ENST00000540086 A0A0G2JS52 829 aa8.78□□□□□ -1
CDH19-203ENST00000540086 ANXA1P04083 346 aa8.78□□□□□ -1
CDH19-203ENST00000540086 MYT1Q01538 1121 aa8.78□□□□□ -1
CDH19-203ENST00000540086 MARCH10Q8NA82 808 aaPredicted RBP8.78□□□□□ -1
CDH19-203ENST00000540086 CHPF2Q9P2E5 772 aa8.78□□□□□ -1
CDH19-203ENST00000540086 KDM3BQ7LBC6 1761 aa8.78□□□□□ -1
CDH19-203ENST00000540086 SHANK3Q9BYB0 1731 aa8.77□□□□□ -1
CDH19-203ENST00000540086 RGS12O14924 1447 aa8.77□□□□□ -1
CDH19-203ENST00000540086 FLIIQ13045 1269 aa8.77□□□□□ -1
CDH19-203ENST00000540086 PIGBQ92521 554 aa8.77□□□□□ -1
CDH19-203ENST00000540086 FMNL2Q96PY5 1086 aa8.77□□□□□ -1
CDH19-203ENST00000540086 PTPRCP08575 1304 aa8.77□□□□□ -1.01
CDH19-203ENST00000540086 SCN11AQ9UI33 1791 aa8.77□□□□□ -1.01
CDH19-203ENST00000540086 F6X3S4 739 aa8.77□□□□□ -1.01
CDH19-203ENST00000540086 PTCD1O75127 700 aaKnown RBP8.77□□□□□ -1.01
CDH19-203ENST00000540086 PROSER3Q2NL68 480 aa8.77□□□□□ -1.01
CDH19-203ENST00000540086 SYTL4Q96C24 671 aaPredicted RBP8.77□□□□□ -1.01
CDH19-203ENST00000540086 PHAXQ9H814 394 aaKnown RBP8.77□□□□□ -1.01
CDH19-203ENST00000540086 DDX19BQ9UMR2 479 aa8.77□□□□□ -1.01
CDH19-203ENST00000540086 SNRPA1P09661 255 aaKnown RBP8.76□□□□□ -1.01
CDH19-203ENST00000540086 FKBP5Q13451 457 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms