RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 HTATSF1O43719 755 aaKnown RBP12.24□□□□□ -0.45
TRAF1-202ENST00000540010 EIF2S2P20042 333 aaKnown RBP12.23□□□□□ -0.45
TRAF1-202ENST00000540010 RTL1A6NKG5 1358 aa12.23□□□□□ -0.45
TRAF1-202ENST00000540010 MAP3K5Q99683 1374 aa12.23□□□□□ -0.45
TRAF1-202ENST00000540010 CHD2O14647 1828 aaKnown RBP12.23□□□□□ -0.45
TRAF1-202ENST00000540010 FKBP5Q13451 457 aaPredicted RBP12.23□□□□□ -0.45
TRAF1-202ENST00000540010 CCDC30Q5VVM6 783 aa12.23□□□□□ -0.45
TRAF1-202ENST00000540010 RAPGEF4Q8WZA2 1011 aa12.23□□□□□ -0.45
TRAF1-202ENST00000540010 NRDCO43847 1150 aa12.23□□□□□ -0.45
TRAF1-202ENST00000540010 NPHP3Q7Z494 1330 aa12.22□□□□□ -0.45
TRAF1-202ENST00000540010 TRAK2O60296 914 aa12.22□□□□□ -0.45
TRAF1-202ENST00000540010 NALCNQ8IZF0 1738 aa12.22□□□□□ -0.45
TRAF1-202ENST00000540010 PIK3C2AO00443 1686 aa12.22□□□□□ -0.45
TRAF1-202ENST00000540010 BRPF1P55201 1214 aaPredicted RBP12.22□□□□□ -0.45
TRAF1-202ENST00000540010 HDAC1Q13547 482 aaPredicted RBP12.22□□□□□ -0.45
TRAF1-202ENST00000540010 CABLES1Q8TDN4 633 aa12.22□□□□□ -0.45
TRAF1-202ENST00000540010 KDRP35968 1356 aa12.22□□□□□ -0.45
TRAF1-202ENST00000540010 GOLGA6L6A8MZA4 724 aa12.22□□□□□ -0.45
TRAF1-202ENST00000540010 SKOR2Q2VWA4 1001 aaPredicted RBP12.22□□□□□ -0.45
TRAF1-202ENST00000540010 FAM13BQ9NYF5 915 aa12.22□□□□□ -0.45
TRAF1-202ENST00000540010 MPRIPQ6WCQ1 1025 aa12.21□□□□□ -0.45
TRAF1-202ENST00000540010 ARHGEF25Q86VW2 580 aa12.21□□□□□ -0.45
TRAF1-202ENST00000540010 PEAK1Q9H792 1746 aa12.21□□□□□ -0.45
TRAF1-202ENST00000540010 C1orf167Q5SNV9 1468 aa12.21□□□□□ -0.46
TRAF1-202ENST00000540010 KIAA0232Q92628 1395 aa12.21□□□□□ -0.46
TRAF1-202ENST00000540010 ZBTB7BO15156 539 aaPredicted RBP12.2□□□□□ -0.46
TRAF1-202ENST00000540010 C8orf34Q49A92 452 aa12.2□□□□□ -0.46
TRAF1-202ENST00000540010 HDGFL1Q5TGJ6 251 aa12.2□□□□□ -0.46
TRAF1-202ENST00000540010 IL17REQ8NFR9 667 aa12.2□□□□□ -0.46
TRAF1-202ENST00000540010 AMOTQ4VCS5 1084 aa12.2□□□□□ -0.46
TRAF1-202ENST00000540010 PTPRCP08575 1304 aa12.2□□□□□ -0.46
TRAF1-202ENST00000540010 F6X3S4 739 aa12.2□□□□□ -0.46
TRAF1-202ENST00000540010 CDK11BP21127 795 aaKnown RBP12.2□□□□□ -0.46
TRAF1-202ENST00000540010 CHRNA2Q15822 529 aa12.2□□□□□ -0.46
TRAF1-202ENST00000540010 MCTP1Q6DN14 999 aa12.2□□□□□ -0.46
TRAF1-202ENST00000540010 FAM43AQ8N2R8 423 aa12.2□□□□□ -0.46
TRAF1-202ENST00000540010 CHMP3Q9Y3E7 222 aa12.19□□□□□ -0.46
TRAF1-202ENST00000540010 BTBD11A6QL63 1104 aa12.19□□□□□ -0.46
TRAF1-202ENST00000540010 ZNF330Q9Y3S2 320 aaPredicted RBP12.19□□□□□ -0.46
TRAF1-202ENST00000540010 ABCC4O15439 1325 aa12.19□□□□□ -0.46
TRAF1-202ENST00000540010 CHMP4AQ9BY43 222 aa12.18□□□□□ -0.46
TRAF1-202ENST00000540010 GCC1Q96CN9 775 aa12.18□□□□□ -0.46
TRAF1-202ENST00000540010 LGR6Q9HBX8 967 aa12.18□□□□□ -0.46
TRAF1-202ENST00000540010 TULP1O00294 542 aaPredicted RBP12.18□□□□□ -0.46
TRAF1-202ENST00000540010 TATP17735 454 aaPredicted RBP12.18□□□□□ -0.46
TRAF1-202ENST00000540010 CRB1P82279 1406 aa12.18□□□□□ -0.46
TRAF1-202ENST00000540010 AKAP4Q5JQC9 854 aa12.18□□□□□ -0.46
TRAF1-202ENST00000540010 RNF214Q8ND24 703 aa12.18□□□□□ -0.46
TRAF1-202ENST00000540010 G2E3Q7L622 706 aa12.17□□□□□ -0.46
TRAF1-202ENST00000540010 CHD1LQ86WJ1 897 aa12.17□□□□□ -0.46
TRAF1-202ENST00000540010 ANO2Q9NQ90 1003 aa12.17□□□□□ -0.46
TRAF1-202ENST00000540010 MRE11P49959 708 aa12.17□□□□□ -0.46
TRAF1-202ENST00000540010 CCT4P50991 539 aaKnown RBP12.17□□□□□ -0.46
TRAF1-202ENST00000540010 FLIIQ13045 1269 aa12.16□□□□□ -0.46
TRAF1-202ENST00000540010 SMC5Q8IY18 1101 aa12.16□□□□□ -0.46
TRAF1-202ENST00000540010 CCDC9Q9Y3X0 531 aaKnown RBP12.16□□□□□ -0.46
TRAF1-202ENST00000540010 PRDM11Q9NQV5 511 aa12.16□□□□□ -0.46
TRAF1-202ENST00000540010 AXIN2Q9Y2T1 843 aa12.16□□□□□ -0.46
TRAF1-202ENST00000540010 REC8O95072 547 aa12.15□□□□□ -0.46
TRAF1-202ENST00000540010 DLG5Q8TDM6 1919 aa12.15□□□□□ -0.46
TRAF1-202ENST00000540010 INTS3Q68E01 1043 aaKnown RBP12.15□□□□□ -0.46
TRAF1-202ENST00000540010 MEIS3Q99687 375 aa12.15□□□□□ -0.46
TRAF1-202ENST00000540010 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.15□□□□□ -0.47
TRAF1-202ENST00000540010 HSP90B1P14625 803 aaKnown RBP12.15□□□□□ -0.47
TRAF1-202ENST00000540010 GNL2Q13823 731 aaKnown RBP12.15□□□□□ -0.47
TRAF1-202ENST00000540010 SPG7Q9UQ90 795 aa12.15□□□□□ -0.47
TRAF1-202ENST00000540010 NUCB1Q02818 461 aa12.14□□□□□ -0.47
TRAF1-202ENST00000540010 NASPP49321 788 aaPredicted RBP12.14□□□□□ -0.47
TRAF1-202ENST00000540010 BABAM1Q9NWV8 329 aa12.14□□□□□ -0.47
TRAF1-202ENST00000540010 ZNF335Q9H4Z2 1342 aaPredicted RBP12.14□□□□□ -0.47
TRAF1-202ENST00000540010 PHF14O94880 888 aa12.13□□□□□ -0.47
TRAF1-202ENST00000540010 RPAP2Q8IXW5 612 aaPredicted RBP12.13□□□□□ -0.47
TRAF1-202ENST00000540010 RNMTO43148 476 aaKnown RBP12.13□□□□□ -0.47
TRAF1-202ENST00000540010 CAVIN1Q6NZI2 390 aaKnown RBP12.13□□□□□ -0.47
TRAF1-202ENST00000540010 SLAIN2Q9P270 581 aa12.13□□□□□ -0.47
TRAF1-202ENST00000540010 EVA1CP58658 441 aa12.13□□□□□ -0.47
TRAF1-202ENST00000540010 USP19O94966 1318 aa12.13□□□□□ -0.47
TRAF1-202ENST00000540010 MST1RQ04912 1400 aa12.13□□□□□ -0.47
TRAF1-202ENST00000540010 GNAI2P04899 355 aa12.13□□□□□ -0.47
TRAF1-202ENST00000540010 GNAI3P08754 354 aa12.13□□□□□ -0.47
TRAF1-202ENST00000540010 TOM1L2Q6ZVM7 507 aa12.13□□□□□ -0.47
TRAF1-202ENST00000540010 ERBB3P21860 1342 aa12.12□□□□□ -0.47
TRAF1-202ENST00000540010 MPNDQ8N594 471 aa12.12□□□□□ -0.47
TRAF1-202ENST00000540010 R3HCC1Q9Y3T6 440 aaKnown RBP12.12□□□□□ -0.47
TRAF1-202ENST00000540010 BCL11BQ9C0K0 894 aaPredicted RBP12.12□□□□□ -0.47
TRAF1-202ENST00000540010 STRN4Q9NRL3 753 aa12.12□□□□□ -0.47
TRAF1-202ENST00000540010 KDM4FA0A1W2PPD8 638 aa12.11□□□□□ -0.47
TRAF1-202ENST00000540010 NUCB2P80303 420 aa12.11□□□□□ -0.47
TRAF1-202ENST00000540010 KCNQ3O43525 872 aa12.11□□□□□ -0.47
TRAF1-202ENST00000540010 SEC24BO95487 1268 aa12.11□□□□□ -0.47
TRAF1-202ENST00000540010 ANXA1P04083 346 aa12.11□□□□□ -0.47
TRAF1-202ENST00000540010 BRINP3Q76B58 766 aa12.11□□□□□ -0.47
TRAF1-202ENST00000540010 TTC5Q8N0Z6 440 aa12.11□□□□□ -0.47
TRAF1-202ENST00000540010 ANKRD44Q8N8A2 993 aa12.11□□□□□ -0.47
TRAF1-202ENST00000540010 UBTFL1P0CB47 393 aaPredicted RBP12.1□□□□□ -0.47
TRAF1-202ENST00000540010 EIF4A1P60842 406 aaKnown RBP12.1□□□□□ -0.47
TRAF1-202ENST00000540010 CHPF2Q9P2E5 772 aa12.1□□□□□ -0.47
TRAF1-202ENST00000540010 NWD1Q149M9 1564 aa12.1□□□□□ -0.47
TRAF1-202ENST00000540010 NFAT5O94916 1531 aa12.1□□□□□ -0.47
TRAF1-202ENST00000540010 SOS1Q07889 1333 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms