RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 PXDNLA1KZ92 1463 aa20.69■□□□□ 0.9
USB1-203ENST00000539737 CICQ96RK0 1608 aaPredicted RBP20.68■□□□□ 0.9
USB1-203ENST00000539737 KIF3CO14782 793 aa20.68■□□□□ 0.9
USB1-203ENST00000539737 PHKG2P15735 406 aa20.68■□□□□ 0.9
USB1-203ENST00000539737 HSPA6P17066 643 aa20.68■□□□□ 0.9
USB1-203ENST00000539737 SPG7Q9UQ90 795 aa20.68■□□□□ 0.9
USB1-203ENST00000539737 SSFA2P28290 1259 aa20.67■□□□□ 0.9
USB1-203ENST00000539737 POLKQ9UBT6 870 aa20.67■□□□□ 0.9
USB1-203ENST00000539737 KIF24Q5T7B8 1368 aa20.67■□□□□ 0.9
USB1-203ENST00000539737 A0A0G2JLW4 131 aa20.66■□□□□ 0.9
USB1-203ENST00000539737 EIF4A2Q14240 407 aaKnown RBP20.66■□□□□ 0.9
USB1-203ENST00000539737 WASHC2AQ641Q2 1341 aa20.66■□□□□ 0.9
USB1-203ENST00000539737 CDCA8Q53HL2 280 aa20.65■□□□□ 0.9
USB1-203ENST00000539737 KDRP35968 1356 aa20.64■□□□□ 0.89
USB1-203ENST00000539737 RBM42Q9BTD8 480 aaKnown RBP20.64■□□□□ 0.89
USB1-203ENST00000539737 IFNL2Q8IZJ0 200 aa20.63■□□□□ 0.89
USB1-203ENST00000539737 BCS1LQ9Y276 419 aa20.63■□□□□ 0.89
USB1-203ENST00000539737 KIF13BQ9NQT8 1826 aa20.62■□□□□ 0.89
USB1-203ENST00000539737 MYH14Q7Z406 1995 aaKnown RBP20.61■□□□□ 0.89
USB1-203ENST00000539737 DPEP1P16444 411 aa20.61■□□□□ 0.89
USB1-203ENST00000539737 KDM6AO15550 1401 aaPredicted RBP20.61■□□□□ 0.89
USB1-203ENST00000539737 NMRK2Q9NPI5 230 aa20.6■□□□□ 0.89
USB1-203ENST00000539737 C4AP0C0L4 1744 aa20.6■□□□□ 0.89
USB1-203ENST00000539737 COL5A3P25940 1745 aaPredicted RBP20.6■□□□□ 0.89
USB1-203ENST00000539737 AEBP1Q8IUX7 1158 aa20.59■□□□□ 0.89
USB1-203ENST00000539737 ARHGEF1Q92888 912 aaKnown RBP20.59■□□□□ 0.89
USB1-203ENST00000539737 C10orf71Q711Q0 1435 aa20.59■□□□□ 0.89
USB1-203ENST00000539737 HTRA3P83110 453 aa20.58■□□□□ 0.89
USB1-203ENST00000539737 TRAPPC3LQ5T215 181 aa20.58■□□□□ 0.89
USB1-203ENST00000539737 ARHGAP27Q6ZUM4 889 aa20.58■□□□□ 0.89
USB1-203ENST00000539737 SRP68Q9UHB9 627 aaKnown RBP20.58■□□□□ 0.89
USB1-203ENST00000539737 GYS1P13807 737 aa20.57■□□□□ 0.88
USB1-203ENST00000539737 RTCBQ9Y3I0 505 aaKnown RBP20.57■□□□□ 0.88
USB1-203ENST00000539737 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.56■□□□□ 0.88
USB1-203ENST00000539737 BRCA1P38398 1863 aaKnown RBP20.56■□□□□ 0.88
USB1-203ENST00000539737 PTCD1O75127 700 aaKnown RBP20.55■□□□□ 0.88
USB1-203ENST00000539737 FCHSD2O94868 740 aa20.54■□□□□ 0.88
USB1-203ENST00000539737 EIF4G2P78344 907 aaKnown RBP eCLIP20.54■□□□□ 0.88
USB1-203ENST00000539737 ZNF530Q6P9A1 599 aaPredicted RBP20.54■□□□□ 0.88
USB1-203ENST00000539737 KCNA3P22001 575 aa20.53■□□□□ 0.88
USB1-203ENST00000539737 TJP1Q07157 1748 aa20.53■□□□□ 0.88
USB1-203ENST00000539737 DDR1Q08345 913 aa20.52■□□□□ 0.88
USB1-203ENST00000539737 FKBP8Q14318 412 aa20.52■□□□□ 0.88
USB1-203ENST00000539737 CHRNA5P30532 468 aa20.51■□□□□ 0.87
USB1-203ENST00000539737 RFC4P35249 363 aa20.51■□□□□ 0.87
USB1-203ENST00000539737 CABP4P57796 275 aa20.51■□□□□ 0.87
USB1-203ENST00000539737 CCDC87Q9NVE4 849 aa20.51■□□□□ 0.87
USB1-203ENST00000539737 CNTNAP4Q9C0A0 1308 aa20.51■□□□□ 0.87
USB1-203ENST00000539737 RPS6KA4O75676 772 aa20.5■□□□□ 0.87
USB1-203ENST00000539737 TGFB2P61812 414 aa20.5■□□□□ 0.87
USB1-203ENST00000539737 C9orf131Q5VYM1 1079 aa20.5■□□□□ 0.87
USB1-203ENST00000539737 NLGN1Q8N2Q7 840 aa20.5■□□□□ 0.87
USB1-203ENST00000539737 PARP3Q9Y6F1 533 aa20.5■□□□□ 0.87
USB1-203ENST00000539737 ERVV-2B6SEH9 535 aa20.49■□□□□ 0.87
USB1-203ENST00000539737 HMGB2P26583 209 aaKnown RBP20.49■□□□□ 0.87
USB1-203ENST00000539737 CRKLP46109 303 aaKnown RBP20.49■□□□□ 0.87
USB1-203ENST00000539737 ZNF831Q5JPB2 1677 aa20.48■□□□□ 0.87
USB1-203ENST00000539737 KCPQ6ZWJ8 1503 aa20.48■□□□□ 0.87
USB1-203ENST00000539737 HSPA5P11021 654 aaKnown RBP20.48■□□□□ 0.87
USB1-203ENST00000539737 DNAJC5GQ8N7S2 189 aa20.48■□□□□ 0.87
USB1-203ENST00000539737 NFATC2IPQ8NCF5 419 aa20.48■□□□□ 0.87
USB1-203ENST00000539737 DCAF5Q96JK2 942 aa20.48■□□□□ 0.87
USB1-203ENST00000539737 PANK3Q9H999 370 aa20.48■□□□□ 0.87
USB1-203ENST00000539737 PLEKHO1Q53GL0 409 aaPredicted RBP20.47■□□□□ 0.87
USB1-203ENST00000539737 RC3H1Q5TC82 1133 aaKnown RBP20.47■□□□□ 0.87
USB1-203ENST00000539737 ADAMTS7Q9UKP4 1686 aa20.46■□□□□ 0.87
USB1-203ENST00000539737 TOMM70O94826 608 aa20.46■□□□□ 0.87
USB1-203ENST00000539737 MTHFSP49914 203 aa20.46■□□□□ 0.87
USB1-203ENST00000539737 WDR90Q96KV7 1748 aa20.46■□□□□ 0.87
USB1-203ENST00000539737 ARFGEF1Q9Y6D6 1849 aa20.46■□□□□ 0.87
USB1-203ENST00000539737 APLP1P51693 650 aa20.45■□□□□ 0.86
USB1-203ENST00000539737 SULT6B1Q6IMI4 303 aa20.45■□□□□ 0.86
USB1-203ENST00000539737 ADRA2BP18089 450 aa20.44■□□□□ 0.86
USB1-203ENST00000539737 RASSF7Q02833 373 aa20.44■□□□□ 0.86
USB1-203ENST00000539737 INTS5Q6P9B9 1019 aaKnown RBP20.44■□□□□ 0.86
USB1-203ENST00000539737 DNAJC10Q8IXB1 793 aa20.44■□□□□ 0.86
USB1-203ENST00000539737 USP42Q9H9J4 1324 aaKnown RBP20.44■□□□□ 0.86
USB1-203ENST00000539737 RNF181Q9P0P0 153 aa20.43■□□□□ 0.86
USB1-203ENST00000539737 PCNTO95613 3336 aa20.42■□□□□ 0.86
USB1-203ENST00000539737 SLC39A6Q13433 755 aa20.42■□□□□ 0.86
USB1-203ENST00000539737 SCN11AQ9UI33 1791 aa20.41■□□□□ 0.86
USB1-203ENST00000539737 HSP90AB1P08238 724 aaKnown RBP20.41■□□□□ 0.86
USB1-203ENST00000539737 PRELPP51888 382 aa20.41■□□□□ 0.86
USB1-203ENST00000539737 C1orf141Q5JVX7 400 aa20.41■□□□□ 0.86
USB1-203ENST00000539737 USPL1Q5W0Q7 1092 aa20.41■□□□□ 0.86
USB1-203ENST00000539737 RRAGCQ9HB90 399 aa20.41■□□□□ 0.86
USB1-203ENST00000539737 LGR6Q9HBX8 967 aa20.41■□□□□ 0.86
USB1-203ENST00000539737 PIM2Q9P1W9 311 aa20.41■□□□□ 0.86
USB1-203ENST00000539737 POLRMTO00411 1230 aaKnown RBP20.4■□□□□ 0.86
USB1-203ENST00000539737 SBF1O95248 1867 aa20.4■□□□□ 0.86
USB1-203ENST00000539737 DALRD3Q5D0E6 543 aaKnown RBP20.4■□□□□ 0.86
USB1-203ENST00000539737 MORC1Q86VD1 984 aa20.4■□□□□ 0.86
USB1-203ENST00000539737 AFDNP55196 1824 aaKnown RBP20.39■□□□□ 0.86
USB1-203ENST00000539737 IL13P35225 146 aa20.38■□□□□ 0.85
USB1-203ENST00000539737 AMOTQ4VCS5 1084 aa20.38■□□□□ 0.85
USB1-203ENST00000539737 CARMIL3Q8ND23 1372 aa20.37■□□□□ 0.85
USB1-203ENST00000539737 VIRMAQ69YN4 1812 aaKnown RBP20.37■□□□□ 0.85
USB1-203ENST00000539737 HMOX1P09601 288 aa20.37■□□□□ 0.85
USB1-203ENST00000539737 TM4SF1P30408 202 aa20.36■□□□□ 0.85
USB1-203ENST00000539737 C16orf71Q8IYS4 520 aaPredicted RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms