RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 TOGARAM1Q9Y4F4 1720 aa20.84■□□□□ 0.93
TRAF3-204ENST00000539721 ELL2O00472 640 aaPredicted RBP20.84■□□□□ 0.93
TRAF3-204ENST00000539721 RARSP54136 660 aaKnown RBP20.84■□□□□ 0.93
TRAF3-204ENST00000539721 RRP1P56182 461 aaKnown RBP20.84■□□□□ 0.93
TRAF3-204ENST00000539721 TWISTNBQ3B726 338 aaPredicted RBP20.84■□□□□ 0.93
TRAF3-204ENST00000539721 TSPYL6Q8N831 410 aa20.84■□□□□ 0.93
TRAF3-204ENST00000539721 GTF3C3Q9Y5Q9 886 aa20.84■□□□□ 0.93
TRAF3-204ENST00000539721 CABP4P57796 275 aa20.83■□□□□ 0.93
TRAF3-204ENST00000539721 NFATC2IPQ8NCF5 419 aa20.82■□□□□ 0.92
TRAF3-204ENST00000539721 GJD4Q96KN9 370 aaPredicted RBP20.82■□□□□ 0.92
TRAF3-204ENST00000539721 ERVV-2B6SEH9 535 aa20.82■□□□□ 0.92
TRAF3-204ENST00000539721 VAMP4O75379 141 aa20.82■□□□□ 0.92
TRAF3-204ENST00000539721 BCAR3O75815 825 aa20.82■□□□□ 0.92
TRAF3-204ENST00000539721 KRT24Q2M2I5 525 aa20.82■□□□□ 0.92
TRAF3-204ENST00000539721 THSD7AQ9UPZ6 1657 aa20.82■□□□□ 0.92
TRAF3-204ENST00000539721 A0A0G2JS52 829 aa20.8■□□□□ 0.92
TRAF3-204ENST00000539721 MYT1Q01538 1121 aa20.8■□□□□ 0.92
TRAF3-204ENST00000539721 ZNF428Q96B54 188 aa20.8■□□□□ 0.92
TRAF3-204ENST00000539721 IRX6P78412 446 aaPredicted RBP20.8■□□□□ 0.92
TRAF3-204ENST00000539721 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.8■□□□□ 0.92
TRAF3-204ENST00000539721 BCL2L13Q9BXK5 485 aa20.8■□□□□ 0.92
TRAF3-204ENST00000539721 QTRT2Q9H974 415 aaKnown RBP20.8■□□□□ 0.92
TRAF3-204ENST00000539721 KCNQ3O43525 872 aa20.79■□□□□ 0.92
TRAF3-204ENST00000539721 ITGB4P16144 1822 aa20.79■□□□□ 0.92
TRAF3-204ENST00000539721 EIF4A1P60842 406 aaKnown RBP20.78■□□□□ 0.92
TRAF3-204ENST00000539721 ALDH1L2Q3SY69 923 aa20.78■□□□□ 0.92
TRAF3-204ENST00000539721 SSH1Q8WYL5 1049 aa20.78■□□□□ 0.92
TRAF3-204ENST00000539721 SMC4Q9NTJ3 1288 aa20.78■□□□□ 0.92
TRAF3-204ENST00000539721 DOT1LQ8TEK3 1739 aa20.78■□□□□ 0.92
TRAF3-204ENST00000539721 PLIN1O60240 522 aa20.77■□□□□ 0.92
TRAF3-204ENST00000539721 FKBP8Q14318 412 aa20.77■□□□□ 0.92
TRAF3-204ENST00000539721 MARCH10Q8NA82 808 aaPredicted RBP20.77■□□□□ 0.91
TRAF3-204ENST00000539721 SLC39A6Q13433 755 aa20.76■□□□□ 0.91
TRAF3-204ENST00000539721 ZNF790Q6PG37 636 aa20.76■□□□□ 0.91
TRAF3-204ENST00000539721 PAPPAQ13219 1627 aa20.76■□□□□ 0.91
TRAF3-204ENST00000539721 SOS1Q07889 1333 aaPredicted RBP20.76■□□□□ 0.91
TRAF3-204ENST00000539721 CANXP27824 592 aaKnown RBP20.75■□□□□ 0.91
TRAF3-204ENST00000539721 ZNF772Q68DY9 489 aaPredicted RBP20.75■□□□□ 0.91
TRAF3-204ENST00000539721 TMOD3Q9NYL9 352 aa20.75■□□□□ 0.91
TRAF3-204ENST00000539721 TTC5Q8N0Z6 440 aa20.74■□□□□ 0.91
TRAF3-204ENST00000539721 KAT6BQ8WYB5 2073 aa20.74■□□□□ 0.91
TRAF3-204ENST00000539721 FRAT1Q92837 279 aaPredicted RBP20.74■□□□□ 0.91
TRAF3-204ENST00000539721 TCERG1O14776 1098 aaKnown RBP20.72■□□□□ 0.91
TRAF3-204ENST00000539721 UBR2Q8IWV8 1755 aa20.72■□□□□ 0.91
TRAF3-204ENST00000539721 ONECUT3O60422 494 aaPredicted RBP20.72■□□□□ 0.91
TRAF3-204ENST00000539721 HOXB7P09629 217 aa20.72■□□□□ 0.91
TRAF3-204ENST00000539721 MRPL50Q8N5N7 158 aaKnown RBP20.72■□□□□ 0.91
TRAF3-204ENST00000539721 KIF16BQ96L93 1317 aa20.72■□□□□ 0.91
TRAF3-204ENST00000539721 HEG1Q9ULI3 1381 aa20.71■□□□□ 0.91
TRAF3-204ENST00000539721 SYTL4Q96C24 671 aaPredicted RBP20.7■□□□□ 0.9
TRAF3-204ENST00000539721 C5P01031 1676 aa20.7■□□□□ 0.9
TRAF3-204ENST00000539721 BCL9O00512 1426 aa20.69■□□□□ 0.9
TRAF3-204ENST00000539721 BRPF1P55201 1214 aaPredicted RBP20.69■□□□□ 0.9
TRAF3-204ENST00000539721 SEPT12Q8IYM1 358 aa20.69■□□□□ 0.9
TRAF3-204ENST00000539721 PIGBQ92521 554 aa20.69■□□□□ 0.9
TRAF3-204ENST00000539721 FMNL2Q96PY5 1086 aa20.69■□□□□ 0.9
TRAF3-204ENST00000539721 GIGYF1O75420 1035 aaPredicted RBP20.69■□□□□ 0.9
TRAF3-204ENST00000539721 HDGFL1Q5TGJ6 251 aa20.69■□□□□ 0.9
TRAF3-204ENST00000539721 CCDC30Q5VVM6 783 aa20.69■□□□□ 0.9
TRAF3-204ENST00000539721 ZKSCAN2Q63HK3 967 aa20.69■□□□□ 0.9
TRAF3-204ENST00000539721 ZNF496Q96IT1 587 aaPredicted RBP20.69■□□□□ 0.9
TRAF3-204ENST00000539721 PRIM1P49642 420 aaKnown RBP20.68■□□□□ 0.9
TRAF3-204ENST00000539721 NECTIN2Q92692 538 aa20.68■□□□□ 0.9
TRAF3-204ENST00000539721 ACSBG1Q96GR2 724 aa20.68■□□□□ 0.9
TRAF3-204ENST00000539721 STK31Q9BXU1 1019 aa20.68■□□□□ 0.9
TRAF3-204ENST00000539721 CHMP4AQ9BY43 222 aa20.68■□□□□ 0.9
TRAF3-204ENST00000539721 NOB1Q9ULX3 412 aaKnown RBP20.68■□□□□ 0.9
TRAF3-204ENST00000539721 CACNA1FO60840 1977 aa20.68■□□□□ 0.9
TRAF3-204ENST00000539721 KCPQ6ZWJ8 1503 aa20.68■□□□□ 0.9
TRAF3-204ENST00000539721 C20orf194Q5TEA3 1177 aa20.67■□□□□ 0.9
TRAF3-204ENST00000539721 IPO8O15397 1037 aaKnown RBP20.67■□□□□ 0.9
TRAF3-204ENST00000539721 EIF2S2P20042 333 aaKnown RBP20.67■□□□□ 0.9
TRAF3-204ENST00000539721 RBM6P78332 1123 aaKnown RBP20.67■□□□□ 0.9
TRAF3-204ENST00000539721 LAMB4A4D0S4 1761 aa20.66■□□□□ 0.9
TRAF3-204ENST00000539721 PRAMEF22A3QJZ6 481 aa20.65■□□□□ 0.9
TRAF3-204ENST00000539721 PDE3AQ14432 1141 aa20.65■□□□□ 0.9
TRAF3-204ENST00000539721 BRWD3Q6RI45 1802 aa20.65■□□□□ 0.9
TRAF3-204ENST00000539721 SLC4A2P04920 1241 aa20.64■□□□□ 0.9
TRAF3-204ENST00000539721 SNRPA1P09661 255 aaKnown RBP20.64■□□□□ 0.9
TRAF3-204ENST00000539721 ASAP1Q9ULH1 1129 aa20.64■□□□□ 0.9
TRAF3-204ENST00000539721 ERICH6BQ5W0A0 696 aa20.64■□□□□ 0.89
TRAF3-204ENST00000539721 ATF7IPQ6VMQ6 1270 aa20.64■□□□□ 0.89
TRAF3-204ENST00000539721 ATG3Q9NT62 314 aa20.64■□□□□ 0.89
TRAF3-204ENST00000539721 TNNQ9UQP3 1299 aa20.64■□□□□ 0.89
TRAF3-204ENST00000539721 PTCD1O75127 700 aaKnown RBP20.63■□□□□ 0.89
TRAF3-204ENST00000539721 MS4A1P11836 297 aa20.63■□□□□ 0.89
TRAF3-204ENST00000539721 CRBNQ96SW2 442 aa20.63■□□□□ 0.89
TRAF3-204ENST00000539721 TRIM27P14373 513 aa20.62■□□□□ 0.89
TRAF3-204ENST00000539721 FTSJ3Q8IY81 847 aaKnown RBP20.62■□□□□ 0.89
TRAF3-204ENST00000539721 ARHGAP45Q92619 1136 aa20.62■□□□□ 0.89
TRAF3-204ENST00000539721 CLUAP1Q96AJ1 413 aa20.62■□□□□ 0.89
TRAF3-204ENST00000539721 NHSQ6T4R5 1651 aa20.62■□□□□ 0.89
TRAF3-204ENST00000539721 PANK1Q8TE04 598 aa20.62■□□□□ 0.89
TRAF3-204ENST00000539721 FAM182BQ5T319 152 aa20.61■□□□□ 0.89
TRAF3-204ENST00000539721 DZIP1LQ8IYY4 767 aaKnown RBP20.61■□□□□ 0.89
TRAF3-204ENST00000539721 EXOC6Q8TAG9 804 aa20.61■□□□□ 0.89
TRAF3-204ENST00000539721 CHPF2Q9P2E5 772 aa20.6■□□□□ 0.89
TRAF3-204ENST00000539721 SBF2Q86WG5 1849 aa20.6■□□□□ 0.89
TRAF3-204ENST00000539721 PTPRCP08575 1304 aa20.6■□□□□ 0.89
TRAF3-204ENST00000539721 KCNQ2O43526 872 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms