RNA–Protein interactions for RNA: ENST00000539680.1

ECHDC2-222, Transcript of enoyl-CoA hydratase domain containing 2, human

Gene ECHDC2, Length 5,817 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-222	ENST00000539680	FKBP15	Q5T1M5	1219 aa		10.52	□□□□□ -0.73
ECHDC2-222	ENST00000539680	DDX54	Q8TDD1	881 aa	Known RBP	10.52	□□□□□ -0.73
ECHDC2-222	ENST00000539680	RAB34	Q9BZG1	259 aa		10.52	□□□□□ -0.73
ECHDC2-222	ENST00000539680	NSD3	Q9BZ95	1437 aa		10.52	□□□□□ -0.73
ECHDC2-222	ENST00000539680	AFAP1	Q8N556	730 aa		10.52	□□□□□ -0.73
ECHDC2-222	ENST00000539680	CCDC150	Q8NCX0	1101 aa		10.52	□□□□□ -0.73
ECHDC2-222	ENST00000539680	LRPPRC	P42704	1394 aa	Known RBP	10.51	□□□□□ -0.73
ECHDC2-222	ENST00000539680	EIF5	P55010	431 aa	Known RBP	10.51	□□□□□ -0.73
ECHDC2-222	ENST00000539680	MAP3K11	Q16584	847 aa		10.51	□□□□□ -0.73
ECHDC2-222	ENST00000539680	CTAGE5	O15320	804 aa		10.51	□□□□□ -0.73
ECHDC2-222	ENST00000539680	WDHD1	O75717	1129 aa	Predicted RBP	10.51	□□□□□ -0.73
ECHDC2-222	ENST00000539680	SPA17	Q15506	151 aa		10.51	□□□□□ -0.73
ECHDC2-222	ENST00000539680	MAP9	Q49MG5	647 aa		10.51	□□□□□ -0.73
ECHDC2-222	ENST00000539680	LARP1	Q6PKG0	1096 aa	Known RBP	10.51	□□□□□ -0.73
ECHDC2-222	ENST00000539680	VPS36	Q86VN1	386 aa		10.51	□□□□□ -0.73
ECHDC2-222	ENST00000539680	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10.51	□□□□□ -0.73
ECHDC2-222	ENST00000539680	CUL5	Q93034	780 aa		10.51	□□□□□ -0.73
ECHDC2-222	ENST00000539680	NSD2	O96028	1365 aa		10.51	□□□□□ -0.73
ECHDC2-222	ENST00000539680	CDCA7L	Q96GN5	454 aa		10.5	□□□□□ -0.73
ECHDC2-222	ENST00000539680	SYNJ1	O43426	1573 aa		10.5	□□□□□ -0.73
ECHDC2-222	ENST00000539680	GLRX3	O76003	335 aa	Known RBP	10.5	□□□□□ -0.73
ECHDC2-222	ENST00000539680	MAP4K4	O95819	1239 aa	Predicted RBP	10.5	□□□□□ -0.73
ECHDC2-222	ENST00000539680	IFIT1	P09914	478 aa	Known RBP	10.5	□□□□□ -0.73
ECHDC2-222	ENST00000539680	TMEM266	Q2M3C6	531 aa		10.5	□□□□□ -0.73
ECHDC2-222	ENST00000539680	RNF41	Q9H4P4	317 aa	Predicted RBP	10.5	□□□□□ -0.73
ECHDC2-222	ENST00000539680	SLC5A1	P13866	664 aa		10.5	□□□□□ -0.73
ECHDC2-222	ENST00000539680	CWC27	Q6UX04	472 aa	Known RBP	10.5	□□□□□ -0.73
ECHDC2-222	ENST00000539680	BCAR3	O75815	825 aa		10.49	□□□□□ -0.73
ECHDC2-222	ENST00000539680	TAF3	Q5VWG9	929 aa		10.49	□□□□□ -0.73
ECHDC2-222	ENST00000539680	BACH2	Q9BYV9	841 aa		10.49	□□□□□ -0.73
ECHDC2-222	ENST00000539680	ANO10	Q9NW15	660 aa		10.49	□□□□□ -0.73
ECHDC2-222	ENST00000539680	DHX29	Q7Z478	1369 aa	Known RBP	10.49	□□□□□ -0.73
ECHDC2-222	ENST00000539680	USP5	P45974	858 aa		10.49	□□□□□ -0.73
ECHDC2-222	ENST00000539680	METTL24	Q5JXM2	366 aa		10.49	□□□□□ -0.73
ECHDC2-222	ENST00000539680	CCDC83	Q8IWF9	413 aa		10.49	□□□□□ -0.73
ECHDC2-222	ENST00000539680	PRDM11	Q9NQV5	511 aa		10.49	□□□□□ -0.73
ECHDC2-222	ENST00000539680	TOPBP1	Q92547	1522 aa		10.49	□□□□□ -0.73
ECHDC2-222	ENST00000539680	POTEB2	H3BUK9	544 aa		10.49	□□□□□ -0.73
ECHDC2-222	ENST00000539680	CAST	P20810	708 aa	Known RBP	10.49	□□□□□ -0.73
ECHDC2-222	ENST00000539680	TMOD3	Q9NYL9	352 aa		10.49	□□□□□ -0.73
ECHDC2-222	ENST00000539680		A0A087WZG4	1122 aa		10.48	□□□□□ -0.73
ECHDC2-222	ENST00000539680	SSB	P05455	408 aa	Known RBP eCLIP	10.48	□□□□□ -0.73
ECHDC2-222	ENST00000539680	MX1	P20591	662 aa		10.48	□□□□□ -0.73
ECHDC2-222	ENST00000539680	ZPR1	O75312	459 aa		10.48	□□□□□ -0.73
ECHDC2-222	ENST00000539680	POLR3D	P05423	398 aa	Predicted RBP	10.48	□□□□□ -0.73
ECHDC2-222	ENST00000539680	CASQ1	P31415	396 aa		10.48	□□□□□ -0.73
ECHDC2-222	ENST00000539680	ARHGAP29	Q52LW3	1261 aa		10.48	□□□□□ -0.73
ECHDC2-222	ENST00000539680	CCDC12	Q8WUD4	166 aa	Predicted RBP	10.48	□□□□□ -0.73
ECHDC2-222	ENST00000539680	SCAND2P	Q9GZW5	306 aa	Predicted RBP	10.48	□□□□□ -0.73
ECHDC2-222	ENST00000539680	SLC12A5	Q9H2X9	1139 aa		10.48	□□□□□ -0.73
ECHDC2-222	ENST00000539680	NKTR	P30414	1462 aa	Known RBP	10.48	□□□□□ -0.73
ECHDC2-222	ENST00000539680	TTF1	Q15361	905 aa	Predicted RBP	10.48	□□□□□ -0.73
ECHDC2-222	ENST00000539680	CCDC183	Q5T5S1	534 aa		10.48	□□□□□ -0.73
ECHDC2-222	ENST00000539680	LRRC27	Q9C0I9	530 aa		10.48	□□□□□ -0.73
ECHDC2-222	ENST00000539680	GCOM1	H8Y6P7	765 aa	Predicted RBP	10.48	□□□□□ -0.73
ECHDC2-222	ENST00000539680	MYZAP	P0CAP1	466 aa		10.48	□□□□□ -0.73
ECHDC2-222	ENST00000539680	MAP3K12	Q12852	859 aa		10.48	□□□□□ -0.73
ECHDC2-222	ENST00000539680	IQGAP2	Q13576	1575 aa		10.48	□□□□□ -0.73
ECHDC2-222	ENST00000539680	PTPRC	P08575	1304 aa		10.47	□□□□□ -0.73
ECHDC2-222	ENST00000539680	NEMF	O60524	1076 aa		10.47	□□□□□ -0.73
ECHDC2-222	ENST00000539680	BAG4	O95429	457 aa	Known RBP	10.47	□□□□□ -0.73
ECHDC2-222	ENST00000539680	SLFN5	Q08AF3	891 aa		10.47	□□□□□ -0.73
ECHDC2-222	ENST00000539680	STAMBP	O95630	424 aa		10.47	□□□□□ -0.73
ECHDC2-222	ENST00000539680	SSRP1	Q08945	709 aa	Known RBP	10.47	□□□□□ -0.73
ECHDC2-222	ENST00000539680	GOLGA6L10	A0A0M3HER8	536 aa		10.47	□□□□□ -0.73
ECHDC2-222	ENST00000539680	NUTM2B	A6NNL0	878 aa	Predicted RBP	10.47	□□□□□ -0.73
ECHDC2-222	ENST00000539680	NUTM2E	B1AL46	878 aa	Predicted RBP	10.47	□□□□□ -0.73
ECHDC2-222	ENST00000539680	TAX1BP1	Q86VP1	789 aa		10.47	□□□□□ -0.73
ECHDC2-222	ENST00000539680	NUTM2A	Q8IVF1	878 aa	Predicted RBP	10.47	□□□□□ -0.73
ECHDC2-222	ENST00000539680	FAM114A1	Q8IWE2	563 aa		10.47	□□□□□ -0.73
ECHDC2-222	ENST00000539680	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	10.47	□□□□□ -0.73
ECHDC2-222	ENST00000539680	HYPK	Q9NX55	129 aa		10.47	□□□□□ -0.73
ECHDC2-222	ENST00000539680	KIF5C	O60282	957 aa		10.46	□□□□□ -0.73
ECHDC2-222	ENST00000539680	NBPF1	Q3BBV0	1214 aa		10.46	□□□□□ -0.73
ECHDC2-222	ENST00000539680	NUDT16	Q96DE0	195 aa	Known RBP	10.46	□□□□□ -0.73
ECHDC2-222	ENST00000539680	TEX13A	Q9BXU3	409 aa	Predicted RBP	10.46	□□□□□ -0.73
ECHDC2-222	ENST00000539680	PTPN23	Q9H3S7	1636 aa		10.46	□□□□□ -0.73
ECHDC2-222	ENST00000539680	IDH1	O75874	414 aa	Known RBP	10.46	□□□□□ -0.73
ECHDC2-222	ENST00000539680	TMPO	P42166	694 aa	Known RBP	10.46	□□□□□ -0.73
ECHDC2-222	ENST00000539680	STXBP4	Q6ZWJ1	553 aa		10.46	□□□□□ -0.73
ECHDC2-222	ENST00000539680	CTCFL	Q8NI51	663 aa	Predicted RBP	10.46	□□□□□ -0.73
ECHDC2-222	ENST00000539680	UQCRHL	A0A096LP55	91 aa		10.46	□□□□□ -0.73
ECHDC2-222	ENST00000539680	SHTN1	A0MZ66	631 aa		10.46	□□□□□ -0.73
ECHDC2-222	ENST00000539680	UQCRH	P07919	91 aa		10.46	□□□□□ -0.73
ECHDC2-222	ENST00000539680	STK11IP	Q8N1F8	1099 aa		10.46	□□□□□ -0.73
ECHDC2-222	ENST00000539680	CAMSAP2	Q08AD1	1489 aa		10.46	□□□□□ -0.74
ECHDC2-222	ENST00000539680	AMPD3	Q01432	767 aa		10.46	□□□□□ -0.74
ECHDC2-222	ENST00000539680	MPHOSPH6	Q99547	160 aa	Known RBP	10.46	□□□□□ -0.74
ECHDC2-222	ENST00000539680	MKNK2	Q9HBH9	465 aa		10.46	□□□□□ -0.74
ECHDC2-222	ENST00000539680	KIAA0586	Q9BVV6	1533 aa		10.46	□□□□□ -0.74
ECHDC2-222	ENST00000539680	USO1	O60763	962 aa	Known RBP	10.46	□□□□□ -0.74
ECHDC2-222	ENST00000539680	TAF7	Q15545	349 aa	Predicted RBP	10.46	□□□□□ -0.74
ECHDC2-222	ENST00000539680	PPP4R3B	Q5MIZ7	849 aa		10.46	□□□□□ -0.74
ECHDC2-222	ENST00000539680	AKNA	Q7Z591	1439 aa		10.45	□□□□□ -0.74
ECHDC2-222	ENST00000539680	DDX12P	Q92771	950 aa		10.45	□□□□□ -0.74
ECHDC2-222	ENST00000539680	TTC21B	Q7Z4L5	1316 aa		10.45	□□□□□ -0.74
ECHDC2-222	ENST00000539680	NCOA1	Q15788	1441 aa		10.45	□□□□□ -0.74
ECHDC2-222	ENST00000539680	DZIP1	Q86YF9	867 aa	Known RBP	10.45	□□□□□ -0.74
ECHDC2-222	ENST00000539680	PPP1R1B	Q9UD71	204 aa	Predicted RBP	10.45	□□□□□ -0.74
ECHDC2-222	ENST00000539680	PRX	Q9BXM0	1461 aa		10.45	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms