RNA–Protein interactions for RNA: ENST00000539643.1

SLC38A10-203, Transcript of solute carrier family 38 member 10, humanhuman

TSL 1 (best)

Gene SLC38A10, Length 1,988 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A10-203ENST00000539643 BECN1Q14457 450 aa22.7■■□□□ 1.23
SLC38A10-203ENST00000539643 GCC1Q96CN9 775 aa22.7■■□□□ 1.23
SLC38A10-203ENST00000539643 LNPKQ9C0E8 428 aa22.7■■□□□ 1.23
SLC38A10-203ENST00000539643 OVOS2A0A0G2JMS6 1433 aa22.7■■□□□ 1.22
SLC38A10-203ENST00000539643 INTS3Q68E01 1043 aaKnown RBP22.69■■□□□ 1.22
SLC38A10-203ENST00000539643 ZNF530Q6P9A1 599 aaPredicted RBP22.69■■□□□ 1.22
SLC38A10-203ENST00000539643 NLRP2Q9NX02 1062 aa22.68■■□□□ 1.22
SLC38A10-203ENST00000539643 PLEKHG2Q9H7P9 1386 aa22.68■■□□□ 1.22
SLC38A10-203ENST00000539643 SLC4A2P04920 1241 aa22.67■■□□□ 1.22
SLC38A10-203ENST00000539643 FAM208AQ9UK61 1670 aaKnown RBP22.66■■□□□ 1.22
SLC38A10-203ENST00000539643 SIRT2Q8IXJ6 389 aa22.66■■□□□ 1.22
SLC38A10-203ENST00000539643 LGR6Q9HBX8 967 aa22.66■■□□□ 1.22
SLC38A10-203ENST00000539643 CSB-PGBD3P0DP91 1061 aa22.65■■□□□ 1.22
SLC38A10-203ENST00000539643 ANKRD45Q5TZF3 282 aa22.65■■□□□ 1.22
SLC38A10-203ENST00000539643 PRDM11Q9NQV5 511 aa22.65■■□□□ 1.22
SLC38A10-203ENST00000539643 KDM3BQ7LBC6 1761 aa22.65■■□□□ 1.22
SLC38A10-203ENST00000539643 NFKBIBQ15653 356 aa22.65■■□□□ 1.22
SLC38A10-203ENST00000539643 ADAMTS7Q9UKP4 1686 aa22.64■■□□□ 1.22
SLC38A10-203ENST00000539643 MFAP1P55081 439 aaKnown RBP22.63■■□□□ 1.21
SLC38A10-203ENST00000539643 C1orf141Q5JVX7 400 aa22.63■■□□□ 1.21
SLC38A10-203ENST00000539643 CCDC30Q5VVM6 783 aa22.63■■□□□ 1.21
SLC38A10-203ENST00000539643 RAPGEF4Q8WZA2 1011 aa22.63■■□□□ 1.21
SLC38A10-203ENST00000539643 ROBO1Q9Y6N7 1651 aa22.62■■□□□ 1.21
SLC38A10-203ENST00000539643 RNMTO43148 476 aaKnown RBP22.62■■□□□ 1.21
SLC38A10-203ENST00000539643 STK31Q9BXU1 1019 aa22.62■■□□□ 1.21
SLC38A10-203ENST00000539643 C22orf23Q9BZE7 217 aa22.61■■□□□ 1.21
SLC38A10-203ENST00000539643 ABCA3Q99758 1704 aa22.61■■□□□ 1.21
SLC38A10-203ENST00000539643 CACNA1FO60840 1977 aa22.61■■□□□ 1.21
SLC38A10-203ENST00000539643 HOXB7P09629 217 aa22.61■■□□□ 1.21
SLC38A10-203ENST00000539643 MPRIPQ6WCQ1 1025 aa22.61■■□□□ 1.21
SLC38A10-203ENST00000539643 TATP17735 454 aaPredicted RBP22.6■■□□□ 1.21
SLC38A10-203ENST00000539643 EIF4A1P60842 406 aaKnown RBP22.6■■□□□ 1.21
SLC38A10-203ENST00000539643 TEFQ10587 303 aa22.6■■□□□ 1.21
SLC38A10-203ENST00000539643 G2E3Q7L622 706 aa22.6■■□□□ 1.21
SLC38A10-203ENST00000539643 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.6■■□□□ 1.21
SLC38A10-203ENST00000539643 BMP2KLQ5H9B9 411 aa22.59■■□□□ 1.21
SLC38A10-203ENST00000539643 AHDC1Q5TGY3 1603 aaPredicted RBP22.58■■□□□ 1.2
SLC38A10-203ENST00000539643 SIPA1L3O60292 1781 aaPredicted RBP22.57■■□□□ 1.2
SLC38A10-203ENST00000539643 MEGF6O75095 1541 aa22.57■■□□□ 1.2
SLC38A10-203ENST00000539643 WDR17Q8IZU2 1322 aa22.57■■□□□ 1.2
SLC38A10-203ENST00000539643 ATP10DQ9P241 1426 aa22.57■■□□□ 1.2
SLC38A10-203ENST00000539643 BTBD11A6QL63 1104 aa22.56■■□□□ 1.2
SLC38A10-203ENST00000539643 CHMP4AQ9BY43 222 aa22.56■■□□□ 1.2
SLC38A10-203ENST00000539643 TBC1D2Q9BYX2 928 aa22.56■■□□□ 1.2
SLC38A10-203ENST00000539643 SPG7Q9UQ90 795 aa22.56■■□□□ 1.2
SLC38A10-203ENST00000539643 FLIIQ13045 1269 aa22.56■■□□□ 1.2
SLC38A10-203ENST00000539643 CCT4P50991 539 aaKnown RBP22.55■■□□□ 1.2
SLC38A10-203ENST00000539643 ANKRD44Q8N8A2 993 aa22.55■■□□□ 1.2
SLC38A10-203ENST00000539643 DCTPP1Q9H773 170 aa22.55■■□□□ 1.2
SLC38A10-203ENST00000539643 COL5A2P05997 1499 aaPredicted RBP22.54■■□□□ 1.2
SLC38A10-203ENST00000539643 HDGFL1Q5TGJ6 251 aa22.54■■□□□ 1.2
SLC38A10-203ENST00000539643 RPAP2Q8IXW5 612 aaPredicted RBP22.54■■□□□ 1.2
SLC38A10-203ENST00000539643 HEG1Q9ULI3 1381 aa22.54■■□□□ 1.2
SLC38A10-203ENST00000539643 PKD1L3Q7Z443 1732 aa22.53■■□□□ 1.2
SLC38A10-203ENST00000539643 TOM1L2Q6ZVM7 507 aa22.53■■□□□ 1.2
SLC38A10-203ENST00000539643 KCNQ3O43525 872 aa22.52■■□□□ 1.2
SLC38A10-203ENST00000539643 CEP85Q6P2H3 762 aa22.52■■□□□ 1.2
SLC38A10-203ENST00000539643 PHKG2P15735 406 aa22.52■■□□□ 1.2
SLC38A10-203ENST00000539643 MEIS3Q99687 375 aa22.52■■□□□ 1.2
SLC38A10-203ENST00000539643 SLKQ9H2G2 1235 aaPredicted RBP22.52■■□□□ 1.2
SLC38A10-203ENST00000539643 PXDNLA1KZ92 1463 aa22.52■■□□□ 1.2
SLC38A10-203ENST00000539643 N4BP2Q86UW6 1770 aaPredicted RBP22.51■■□□□ 1.19
SLC38A10-203ENST00000539643 SCN11AQ9UI33 1791 aa22.51■■□□□ 1.19
SLC38A10-203ENST00000539643 F6X3S4 739 aa22.51■■□□□ 1.19
SLC38A10-203ENST00000539643 KDM6AO15550 1401 aaPredicted RBP22.51■■□□□ 1.19
SLC38A10-203ENST00000539643 TOM1O60784 492 aa22.5■■□□□ 1.19
SLC38A10-203ENST00000539643 IFNL2Q8IZJ0 200 aa22.5■■□□□ 1.19
SLC38A10-203ENST00000539643 FRAT2O75474 233 aaPredicted RBP22.5■■□□□ 1.19
SLC38A10-203ENST00000539643 EVA1CP58658 441 aa22.5■■□□□ 1.19
SLC38A10-203ENST00000539643 FKBP5Q13451 457 aaPredicted RBP22.5■■□□□ 1.19
SLC38A10-203ENST00000539643 NECTIN2Q92692 538 aa22.5■■□□□ 1.19
SLC38A10-203ENST00000539643 CARD10Q9BWT7 1032 aa22.5■■□□□ 1.19
SLC38A10-203ENST00000539643 RBM25P49756 843 aaKnown RBP22.49■■□□□ 1.19
SLC38A10-203ENST00000539643 SLC4A10Q6U841 1118 aa22.49■■□□□ 1.19
SLC38A10-203ENST00000539643 ANTXR1Q9H6X2 564 aa22.48■■□□□ 1.19
SLC38A10-203ENST00000539643 STRN4Q9NRL3 753 aa22.48■■□□□ 1.19
SLC38A10-203ENST00000539643 COL22A1Q8NFW1 1626 aaPredicted RBP22.47■■□□□ 1.19
SLC38A10-203ENST00000539643 LARP1Q6PKG0 1096 aaKnown RBP22.47■■□□□ 1.19
SLC38A10-203ENST00000539643 MRC1P22897 1456 aa22.47■■□□□ 1.19
SLC38A10-203ENST00000539643 CYP27B1O15528 508 aa22.47■■□□□ 1.19
SLC38A10-203ENST00000539643 GIGYF1O75420 1035 aaPredicted RBP22.47■■□□□ 1.19
SLC38A10-203ENST00000539643 PLEKHM2Q8IWE5 1019 aa22.47■■□□□ 1.19
SLC38A10-203ENST00000539643 SLC52A2Q9HAB3 445 aa22.47■■□□□ 1.19
SLC38A10-203ENST00000539643 TBC1D9Q6ZT07 1266 aa22.46■■□□□ 1.19
SLC38A10-203ENST00000539643 EIF2S2P20042 333 aaKnown RBP22.45■■□□□ 1.18
SLC38A10-203ENST00000539643 DCAF5Q96JK2 942 aa22.45■■□□□ 1.18
SLC38A10-203ENST00000539643 PHAXQ9H814 394 aaKnown RBP22.45■■□□□ 1.18
SLC38A10-203ENST00000539643 BTG4Q9NY30 223 aa22.45■■□□□ 1.18
SLC38A10-203ENST00000539643 PARP4Q9UKK3 1724 aaKnown RBP22.45■■□□□ 1.18
SLC38A10-203ENST00000539643 PHLPP1O60346 1717 aa22.44■■□□□ 1.18
SLC38A10-203ENST00000539643 CHPF2Q9P2E5 772 aa22.44■■□□□ 1.18
SLC38A10-203ENST00000539643 HMMRO75330 724 aa22.43■■□□□ 1.18
SLC38A10-203ENST00000539643 CDC45O75419 566 aa22.43■■□□□ 1.18
SLC38A10-203ENST00000539643 HSP90AB1P08238 724 aaKnown RBP22.43■■□□□ 1.18
SLC38A10-203ENST00000539643 PIP4K2BP78356 416 aa22.43■■□□□ 1.18
SLC38A10-203ENST00000539643 IL2RBP14784 551 aa22.43■■□□□ 1.18
SLC38A10-203ENST00000539643 GSPT1P15170 499 aaKnown RBP22.43■■□□□ 1.18
SLC38A10-203ENST00000539643 HSCBQ8IWL3 235 aa22.43■■□□□ 1.18
SLC38A10-203ENST00000539643 ZCRB1Q8TBF4 217 aaKnown RBP22.43■■□□□ 1.18
SLC38A10-203ENST00000539643 DBF4Q9UBU7 674 aaPredicted RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms