RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 MTHFSDQ2M296 383 aaKnown RBP12.04□□□□□ -0.48
RTN4IP1-204ENST00000539449 NGEFQ8N5V2 710 aa12.04□□□□□ -0.48
RTN4IP1-204ENST00000539449 THUMPD2Q9BTF0 503 aaKnown RBP12.04□□□□□ -0.48
RTN4IP1-204ENST00000539449 DUSP27Q5VZP5 1158 aa12.03□□□□□ -0.48
RTN4IP1-204ENST00000539449 LARP1Q6PKG0 1096 aaKnown RBP12.03□□□□□ -0.48
RTN4IP1-204ENST00000539449 TRMT2AQ8IZ69 625 aaKnown RBP12.03□□□□□ -0.48
RTN4IP1-204ENST00000539449 NLRP2Q9NX02 1062 aa12.03□□□□□ -0.48
RTN4IP1-204ENST00000539449 COL5A2P05997 1499 aaPredicted RBP12.02□□□□□ -0.48
RTN4IP1-204ENST00000539449 VIRMAQ69YN4 1812 aaKnown RBP12.02□□□□□ -0.48
RTN4IP1-204ENST00000539449 PRELPP51888 382 aa12.02□□□□□ -0.49
RTN4IP1-204ENST00000539449 DCTN1Q14203 1278 aa12.02□□□□□ -0.49
RTN4IP1-204ENST00000539449 COL13A1Q5TAT6 717 aaPredicted RBP12.02□□□□□ -0.49
RTN4IP1-204ENST00000539449 GPBP1L1Q9HC44 474 aaPredicted RBP12.02□□□□□ -0.49
RTN4IP1-204ENST00000539449 THRAP3Q9Y2W1 955 aaKnown RBP12.02□□□□□ -0.49
RTN4IP1-204ENST00000539449 NEFMP07197 916 aa12.01□□□□□ -0.49
RTN4IP1-204ENST00000539449 CSB-PGBD3P0DP91 1061 aa12.01□□□□□ -0.49
RTN4IP1-204ENST00000539449 TXNRD1Q16881 649 aa12.01□□□□□ -0.49
RTN4IP1-204ENST00000539449 WDR63Q8IWG1 891 aa12.01□□□□□ -0.49
RTN4IP1-204ENST00000539449 KLHL34Q8N239 644 aa12.01□□□□□ -0.49
RTN4IP1-204ENST00000539449 LRRC37A3O60309 1634 aa12□□□□□ -0.49
RTN4IP1-204ENST00000539449 GRIN3BO60391 1043 aa11.99□□□□□ -0.49
RTN4IP1-204ENST00000539449 KCNA4P22459 653 aa11.99□□□□□ -0.49
RTN4IP1-204ENST00000539449 SUPT16HQ9Y5B9 1047 aaKnown RBP11.99□□□□□ -0.49
RTN4IP1-204ENST00000539449 WDR17Q8IZU2 1322 aa11.99□□□□□ -0.49
RTN4IP1-204ENST00000539449 MEGF6O75095 1541 aa11.99□□□□□ -0.49
RTN4IP1-204ENST00000539449 E9PSI1 815 aa11.98□□□□□ -0.49
RTN4IP1-204ENST00000539449 MCM10Q7L590 875 aa11.98□□□□□ -0.49
RTN4IP1-204ENST00000539449 DNAJC5GQ8N7S2 189 aa11.98□□□□□ -0.49
RTN4IP1-204ENST00000539449 TSR2Q969E8 191 aaKnown RBP11.98□□□□□ -0.49
RTN4IP1-204ENST00000539449 YBX3P16989 372 aaKnown RBP eCLIP11.97□□□□□ -0.49
RTN4IP1-204ENST00000539449 APLP1P51693 650 aa11.97□□□□□ -0.49
RTN4IP1-204ENST00000539449 TOM1L2Q6ZVM7 507 aa11.97□□□□□ -0.49
RTN4IP1-204ENST00000539449 TNS4Q8IZW8 715 aa11.97□□□□□ -0.49
RTN4IP1-204ENST00000539449 NLGN2Q8NFZ4 835 aa11.97□□□□□ -0.49
RTN4IP1-204ENST00000539449 ZNF526Q8TF50 670 aaPredicted RBP11.97□□□□□ -0.49
RTN4IP1-204ENST00000539449 U3KPZ7 1027 aaPredicted RBP11.97□□□□□ -0.49
RTN4IP1-204ENST00000539449 COL24A1Q17RW2 1714 aa11.97□□□□□ -0.49
RTN4IP1-204ENST00000539449 PKD1L3Q7Z443 1732 aa11.97□□□□□ -0.49
RTN4IP1-204ENST00000539449 IL16Q14005 1332 aa11.96□□□□□ -0.49
RTN4IP1-204ENST00000539449 DDB1Q16531 1140 aa11.96□□□□□ -0.49
RTN4IP1-204ENST00000539449 PLEKHO1Q53GL0 409 aaPredicted RBP11.96□□□□□ -0.49
RTN4IP1-204ENST00000539449 IL17REQ8NFR9 667 aa11.96□□□□□ -0.49
RTN4IP1-204ENST00000539449 GAS2L2Q8NHY3 880 aa11.96□□□□□ -0.49
RTN4IP1-204ENST00000539449 PAPPAQ13219 1627 aa11.96□□□□□ -0.5
RTN4IP1-204ENST00000539449 CRB1P82279 1406 aa11.95□□□□□ -0.5
RTN4IP1-204ENST00000539449 FANCIQ9NVI1 1328 aa11.95□□□□□ -0.5
RTN4IP1-204ENST00000539449 ZNF853P0CG23 659 aa11.95□□□□□ -0.5
RTN4IP1-204ENST00000539449 TATP17735 454 aaPredicted RBP11.95□□□□□ -0.5
RTN4IP1-204ENST00000539449 ZNF530Q6P9A1 599 aaPredicted RBP11.95□□□□□ -0.5
RTN4IP1-204ENST00000539449 CARD10Q9BWT7 1032 aa11.95□□□□□ -0.5
RTN4IP1-204ENST00000539449 LGR6Q9HBX8 967 aa11.95□□□□□ -0.5
RTN4IP1-204ENST00000539449 LAS1LQ9Y4W2 734 aaKnown RBP11.95□□□□□ -0.5
RTN4IP1-204ENST00000539449 WNK3Q9BYP7 1800 aa11.95□□□□□ -0.5
RTN4IP1-204ENST00000539449 BCL9O00512 1426 aa11.94□□□□□ -0.5
RTN4IP1-204ENST00000539449 ADCY9O60503 1353 aa11.94□□□□□ -0.5
RTN4IP1-204ENST00000539449 GNAT3A8MTJ3 354 aa11.94□□□□□ -0.5
RTN4IP1-204ENST00000539449 LMOD3Q0VAK6 560 aa11.94□□□□□ -0.5
RTN4IP1-204ENST00000539449 RAPGEF4Q8WZA2 1011 aa11.94□□□□□ -0.5
RTN4IP1-204ENST00000539449 GTF3C3Q9Y5Q9 886 aa11.94□□□□□ -0.5
RTN4IP1-204ENST00000539449 SCN11AQ9UI33 1791 aa11.93□□□□□ -0.5
RTN4IP1-204ENST00000539449 POLD1P28340 1107 aa11.93□□□□□ -0.5
RTN4IP1-204ENST00000539449 EXOSC9Q06265 439 aaKnown RBP11.93□□□□□ -0.5
RTN4IP1-204ENST00000539449 MARCH10Q8NA82 808 aaPredicted RBP11.93□□□□□ -0.5
RTN4IP1-204ENST00000539449 MIS18AQ9NYP9 233 aa11.93□□□□□ -0.5
RTN4IP1-204ENST00000539449 RCAN3Q9UKA8 241 aa11.93□□□□□ -0.5
RTN4IP1-204ENST00000539449 ADAMTS7Q9UKP4 1686 aa11.93□□□□□ -0.5
RTN4IP1-204ENST00000539449 HTATSF1O43719 755 aaKnown RBP11.92□□□□□ -0.5
RTN4IP1-204ENST00000539449 IRX6P78412 446 aaPredicted RBP11.92□□□□□ -0.5
RTN4IP1-204ENST00000539449 AMOTQ4VCS5 1084 aa11.92□□□□□ -0.5
RTN4IP1-204ENST00000539449 AKAP4Q5JQC9 854 aa11.92□□□□□ -0.5
RTN4IP1-204ENST00000539449 MPRIPQ6WCQ1 1025 aa11.92□□□□□ -0.5
RTN4IP1-204ENST00000539449 MYH16Q9H6N6 1097 aa11.92□□□□□ -0.5
RTN4IP1-204ENST00000539449 MBIPQ9NS73 344 aa11.92□□□□□ -0.5
RTN4IP1-204ENST00000539449 IFT57Q9NWB7 429 aa11.92□□□□□ -0.5
RTN4IP1-204ENST00000539449 SIPA1L3O60292 1781 aaPredicted RBP11.92□□□□□ -0.5
RTN4IP1-204ENST00000539449 RNF123Q5XPI4 1314 aa11.91□□□□□ -0.5
RTN4IP1-204ENST00000539449 CHL1O00533 1208 aa11.91□□□□□ -0.5
RTN4IP1-204ENST00000539449 KIF3CO14782 793 aa11.91□□□□□ -0.5
RTN4IP1-204ENST00000539449 CYP27B1O15528 508 aa11.91□□□□□ -0.5
RTN4IP1-204ENST00000539449 RNMTO43148 476 aaKnown RBP11.91□□□□□ -0.5
RTN4IP1-204ENST00000539449 GNAI1P63096 354 aa11.91□□□□□ -0.5
RTN4IP1-204ENST00000539449 RTF1Q92541 710 aaKnown RBP11.91□□□□□ -0.5
RTN4IP1-204ENST00000539449 CFAP44Q96MT7 982 aa11.91□□□□□ -0.5
RTN4IP1-204ENST00000539449 QSER1Q2KHR3 1735 aa11.91□□□□□ -0.5
RTN4IP1-204ENST00000539449 KDM6AO15550 1401 aaPredicted RBP11.9□□□□□ -0.5
RTN4IP1-204ENST00000539449 IL2RBP14784 551 aa11.9□□□□□ -0.5
RTN4IP1-204ENST00000539449 PHKG2P15735 406 aa11.9□□□□□ -0.5
RTN4IP1-204ENST00000539449 ZNF827Q17R98 1081 aa11.9□□□□□ -0.5
RTN4IP1-204ENST00000539449 KRT24Q2M2I5 525 aa11.9□□□□□ -0.5
RTN4IP1-204ENST00000539449 TSPYL6Q8N831 410 aa11.9□□□□□ -0.5
RTN4IP1-204ENST00000539449 SLC16A10Q8TF71 515 aa11.9□□□□□ -0.5
RTN4IP1-204ENST00000539449 WDR90Q96KV7 1748 aa11.9□□□□□ -0.5
RTN4IP1-204ENST00000539449 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.9□□□□□ -0.5
RTN4IP1-204ENST00000539449 SPG7Q9UQ90 795 aa11.9□□□□□ -0.5
RTN4IP1-204ENST00000539449 CEMIPQ8WUJ3 1361 aa11.9□□□□□ -0.5
RTN4IP1-204ENST00000539449 CALD1Q05682 793 aaKnown RBP11.89□□□□□ -0.51
RTN4IP1-204ENST00000539449 C1orf141Q5JVX7 400 aa11.89□□□□□ -0.51
RTN4IP1-204ENST00000539449 C8orf58Q8NAV2 365 aa11.89□□□□□ -0.51
RTN4IP1-204ENST00000539449 ZCRB1Q8TBF4 217 aaKnown RBP11.89□□□□□ -0.51
RTN4IP1-204ENST00000539449 PCDH10Q9P2E7 1040 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms