RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 NPC1L1Q9UHC9 1359 aa25.82■■□□□ 1.72
TNFRSF1A-212ENST00000539372 HMOX1P09601 288 aa25.82■■□□□ 1.72
TNFRSF1A-212ENST00000539372 ATP6V1AP38606 617 aa25.82■■□□□ 1.72
TNFRSF1A-212ENST00000539372 ITPK1Q13572 414 aa25.82■■□□□ 1.72
TNFRSF1A-212ENST00000539372 COL24A1Q17RW2 1714 aa25.82■■□□□ 1.72
TNFRSF1A-212ENST00000539372 DIAPH1O60610 1272 aaKnown RBP25.81■■□□□ 1.72
TNFRSF1A-212ENST00000539372 PHF14O94880 888 aa25.81■■□□□ 1.72
TNFRSF1A-212ENST00000539372 CABP4P57796 275 aa25.81■■□□□ 1.72
TNFRSF1A-212ENST00000539372 FLAD1Q8NFF5 587 aa25.8■■□□□ 1.72
TNFRSF1A-212ENST00000539372 MAP3K5Q99683 1374 aa25.8■■□□□ 1.72
TNFRSF1A-212ENST00000539372 YY1P25490 414 aa25.79■■□□□ 1.72
TNFRSF1A-212ENST00000539372 RBM42Q9BTD8 480 aaKnown RBP25.78■■□□□ 1.72
TNFRSF1A-212ENST00000539372 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.77■■□□□ 1.72
TNFRSF1A-212ENST00000539372 GNPATO15228 680 aa25.76■■□□□ 1.71
TNFRSF1A-212ENST00000539372 SLC4A9Q96Q91 983 aa25.76■■□□□ 1.71
TNFRSF1A-212ENST00000539372 UBR3Q6ZT12 1888 aa25.75■■□□□ 1.71
TNFRSF1A-212ENST00000539372 NFATC2IPQ8NCF5 419 aa25.75■■□□□ 1.71
TNFRSF1A-212ENST00000539372 AKAP4Q5JQC9 854 aa25.74■■□□□ 1.71
TNFRSF1A-212ENST00000539372 COL3A1P02461 1466 aaPredicted RBP25.73■■□□□ 1.71
TNFRSF1A-212ENST00000539372 SSFA2P28290 1259 aa25.73■■□□□ 1.71
TNFRSF1A-212ENST00000539372 NLGN2Q8NFZ4 835 aa25.73■■□□□ 1.71
TNFRSF1A-212ENST00000539372 U2SURPO15042 1029 aaKnown RBP25.72■■□□□ 1.71
TNFRSF1A-212ENST00000539372 PTCD1O75127 700 aaKnown RBP25.71■■□□□ 1.71
TNFRSF1A-212ENST00000539372 MTHFSDQ2M296 383 aaKnown RBP25.71■■□□□ 1.71
TNFRSF1A-212ENST00000539372 LGR6Q9HBX8 967 aa25.71■■□□□ 1.71
TNFRSF1A-212ENST00000539372 GPR162Q16538 588 aa25.69■■□□□ 1.7
TNFRSF1A-212ENST00000539372 PELP1Q8IZL8 1130 aaKnown RBP25.69■■□□□ 1.7
TNFRSF1A-212ENST00000539372 UTRNP46939 3433 aa25.68■■□□□ 1.7
TNFRSF1A-212ENST00000539372 SCN11AQ9UI33 1791 aa25.68■■□□□ 1.7
TNFRSF1A-212ENST00000539372 RNMTO43148 476 aaKnown RBP25.67■■□□□ 1.7
TNFRSF1A-212ENST00000539372 SLC52A2Q9HAB3 445 aa25.67■■□□□ 1.7
TNFRSF1A-212ENST00000539372 RTCBQ9Y3I0 505 aaKnown RBP25.66■■□□□ 1.7
TNFRSF1A-212ENST00000539372 ZNF831Q5JPB2 1677 aa25.66■■□□□ 1.7
TNFRSF1A-212ENST00000539372 CNTNAP4Q9C0A0 1308 aa25.64■■□□□ 1.7
TNFRSF1A-212ENST00000539372 TRAPPC3LQ5T215 181 aa25.64■■□□□ 1.7
TNFRSF1A-212ENST00000539372 RC3H1Q5TC82 1133 aaKnown RBP25.64■■□□□ 1.7
TNFRSF1A-212ENST00000539372 CFAP53Q96M91 514 aa25.64■■□□□ 1.7
TNFRSF1A-212ENST00000539372 COL5A3P25940 1745 aaPredicted RBP25.63■■□□□ 1.69
TNFRSF1A-212ENST00000539372 PPP2R1AP30153 589 aa25.63■■□□□ 1.69
TNFRSF1A-212ENST00000539372 MRC1P22897 1456 aa25.61■■□□□ 1.69
TNFRSF1A-212ENST00000539372 SLC39A6Q13433 755 aa25.61■■□□□ 1.69
TNFRSF1A-212ENST00000539372 CD2APQ9Y5K6 639 aa25.61■■□□□ 1.69
TNFRSF1A-212ENST00000539372 RPS6KA4O75676 772 aa25.6■■□□□ 1.69
TNFRSF1A-212ENST00000539372 CRKLP46109 303 aaKnown RBP25.6■■□□□ 1.69
TNFRSF1A-212ENST00000539372 ARHGEF1Q92888 912 aaKnown RBP25.6■■□□□ 1.69
TNFRSF1A-212ENST00000539372 TJP1Q07157 1748 aa25.58■■□□□ 1.69
TNFRSF1A-212ENST00000539372 ADRA2BP18089 450 aa25.58■■□□□ 1.69
TNFRSF1A-212ENST00000539372 GAS2L2Q8NHY3 880 aa25.58■■□□□ 1.69
TNFRSF1A-212ENST00000539372 VIRMAQ69YN4 1812 aaKnown RBP25.58■■□□□ 1.68
TNFRSF1A-212ENST00000539372 MYH14Q7Z406 1995 aaKnown RBP25.57■■□□□ 1.68
TNFRSF1A-212ENST00000539372 MMP10P09238 476 aa25.57■■□□□ 1.68
TNFRSF1A-212ENST00000539372 YBX3P16989 372 aaKnown RBP eCLIP25.57■■□□□ 1.68
TNFRSF1A-212ENST00000539372 PRKAR2BP31323 418 aa25.57■■□□□ 1.68
TNFRSF1A-212ENST00000539372 RFC4P35249 363 aa25.57■■□□□ 1.68
TNFRSF1A-212ENST00000539372 DNAJC10Q8IXB1 793 aa25.57■■□□□ 1.68
TNFRSF1A-212ENST00000539372 ADAMTS7Q9UKP4 1686 aa25.57■■□□□ 1.68
TNFRSF1A-212ENST00000539372 PHACTR3Q96KR7 559 aa25.56■■□□□ 1.68
TNFRSF1A-212ENST00000539372 RSPH6AQ9H0K4 717 aa25.56■■□□□ 1.68
TNFRSF1A-212ENST00000539372 NUDCQ9Y266 331 aa25.56■■□□□ 1.68
TNFRSF1A-212ENST00000539372 GOLGB1Q14789 3259 aaKnown RBP25.55■■□□□ 1.68
TNFRSF1A-212ENST00000539372 GNAT3A8MTJ3 354 aa25.55■■□□□ 1.68
TNFRSF1A-212ENST00000539372 U2AF1L5P0DN76 240 aaPredicted RBP25.54■■□□□ 1.68
TNFRSF1A-212ENST00000539372 U2AF1Q01081 240 aaKnown RBP eCLIP25.54■■□□□ 1.68
TNFRSF1A-212ENST00000539372 INTS5Q6P9B9 1019 aaKnown RBP25.54■■□□□ 1.68
TNFRSF1A-212ENST00000539372 IL17REQ8NFR9 667 aa25.54■■□□□ 1.68
TNFRSF1A-212ENST00000539372 KCPQ6ZWJ8 1503 aa25.53■■□□□ 1.68
TNFRSF1A-212ENST00000539372 GYS1P13807 737 aa25.53■■□□□ 1.68
TNFRSF1A-212ENST00000539372 NLGN1Q8N2Q7 840 aa25.53■■□□□ 1.68
TNFRSF1A-212ENST00000539372 CICQ96RK0 1608 aaPredicted RBP25.52■■□□□ 1.68
TNFRSF1A-212ENST00000539372 WWC3Q9ULE0 1092 aa25.52■■□□□ 1.68
TNFRSF1A-212ENST00000539372 CHD4Q14839 1912 aa25.52■■□□□ 1.68
TNFRSF1A-212ENST00000539372 TEFQ10587 303 aa25.51■■□□□ 1.67
TNFRSF1A-212ENST00000539372 ZNF784Q8NCA9 323 aaPredicted RBP25.51■■□□□ 1.67
TNFRSF1A-212ENST00000539372 CCDC87Q9NVE4 849 aa25.51■■□□□ 1.67
TNFRSF1A-212ENST00000539372 SRP68Q9UHB9 627 aaKnown RBP25.51■■□□□ 1.67
TNFRSF1A-212ENST00000539372 C4AP0C0L4 1744 aa25.51■■□□□ 1.67
TNFRSF1A-212ENST00000539372 GRIN3BO60391 1043 aa25.49■■□□□ 1.67
TNFRSF1A-212ENST00000539372 CYP19A1P11511 503 aaPredicted RBP25.49■■□□□ 1.67
TNFRSF1A-212ENST00000539372 TTC5Q8N0Z6 440 aa25.49■■□□□ 1.67
TNFRSF1A-212ENST00000539372 USP42Q9H9J4 1324 aaKnown RBP25.47■■□□□ 1.67
TNFRSF1A-212ENST00000539372 SOS1Q07889 1333 aaPredicted RBP25.46■■□□□ 1.67
TNFRSF1A-212ENST00000539372 FCHSD2O94868 740 aa25.46■■□□□ 1.67
TNFRSF1A-212ENST00000539372 FKBP8Q14318 412 aa25.46■■□□□ 1.67
TNFRSF1A-212ENST00000539372 VSIG10Q8N0Z9 540 aa25.46■■□□□ 1.67
TNFRSF1A-212ENST00000539372 PARP3Q9Y6F1 533 aa25.46■■□□□ 1.67
TNFRSF1A-212ENST00000539372 ZNF790Q6PG37 636 aa25.45■■□□□ 1.66
TNFRSF1A-212ENST00000539372 ZBTB1Q9Y2K1 713 aa25.45■■□□□ 1.66
TNFRSF1A-212ENST00000539372 UBR2Q8IWV8 1755 aa25.45■■□□□ 1.66
TNFRSF1A-212ENST00000539372 CEMIPQ8WUJ3 1361 aa25.44■■□□□ 1.66
TNFRSF1A-212ENST00000539372 ZNF496Q96IT1 587 aaPredicted RBP25.44■■□□□ 1.66
TNFRSF1A-212ENST00000539372 SIPA1L3O60292 1781 aaPredicted RBP25.42■■□□□ 1.66
TNFRSF1A-212ENST00000539372 ZPR1O75312 459 aa25.42■■□□□ 1.66
TNFRSF1A-212ENST00000539372 C10orf71Q711Q0 1435 aa25.42■■□□□ 1.66
TNFRSF1A-212ENST00000539372 CANXP27824 592 aaKnown RBP25.41■■□□□ 1.66
TNFRSF1A-212ENST00000539372 USPL1Q5W0Q7 1092 aa25.41■■□□□ 1.66
TNFRSF1A-212ENST00000539372 MCM10Q7L590 875 aa25.41■■□□□ 1.66
TNFRSF1A-212ENST00000539372 RTF1Q92541 710 aaKnown RBP25.41■■□□□ 1.66
TNFRSF1A-212ENST00000539372 COL15A1P39059 1388 aa25.41■■□□□ 1.66
TNFRSF1A-212ENST00000539372 PXDNLA1KZ92 1463 aa25.4■■□□□ 1.66
TNFRSF1A-212ENST00000539372 BTBD11A6QL63 1104 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms