RNA–Protein interactions for RNA: ENST00000539315.1

LINC00943-205, long intergenic non-protein coding RNA 943, humanhuman

TSL 3

Gene LINC00943, Length 856 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-205ENST00000539315 ATP10DQ9P241 1426 aa25.72■■□□□ 1.71
LINC00943-205ENST00000539315 PER1O15534 1290 aaPredicted RBP25.71■■□□□ 1.71
LINC00943-205ENST00000539315 PHKG2P15735 406 aa25.71■■□□□ 1.71
LINC00943-205ENST00000539315 SSFA2P28290 1259 aa25.71■■□□□ 1.71
LINC00943-205ENST00000539315 IFNL2Q8IZJ0 200 aa25.7■■□□□ 1.7
LINC00943-205ENST00000539315 TMOD3Q9NYL9 352 aa25.7■■□□□ 1.7
LINC00943-205ENST00000539315 ATG3Q9NT62 314 aa25.69■■□□□ 1.7
LINC00943-205ENST00000539315 IGSF1Q8N6C5 1336 aa25.68■■□□□ 1.7
LINC00943-205ENST00000539315 EIF4A2Q14240 407 aaKnown RBP25.68■■□□□ 1.7
LINC00943-205ENST00000539315 WWC3Q9ULE0 1092 aa25.68■■□□□ 1.7
LINC00943-205ENST00000539315 ADCY9O60503 1353 aa25.68■■□□□ 1.7
LINC00943-205ENST00000539315 ATP6V1AP38606 617 aa25.67■■□□□ 1.7
LINC00943-205ENST00000539315 GNPATO15228 680 aa25.66■■□□□ 1.7
LINC00943-205ENST00000539315 TNNT2P45379 298 aaPredicted RBP25.64■■□□□ 1.7
LINC00943-205ENST00000539315 SLC4A9Q96Q91 983 aa25.64■■□□□ 1.7
LINC00943-205ENST00000539315 ANP32CO43423 234 aa25.63■■□□□ 1.69
LINC00943-205ENST00000539315 GPBP1L1Q9HC44 474 aaPredicted RBP25.62■■□□□ 1.69
LINC00943-205ENST00000539315 KDRP35968 1356 aa25.6■■□□□ 1.69
LINC00943-205ENST00000539315 MMP10P09238 476 aa25.59■■□□□ 1.69
LINC00943-205ENST00000539315 AMER1Q5JTC6 1135 aaPredicted RBP25.59■■□□□ 1.69
LINC00943-205ENST00000539315 ZNF526Q8TF50 670 aaPredicted RBP25.59■■□□□ 1.69
LINC00943-205ENST00000539315 ERVV-2B6SEH9 535 aa25.58■■□□□ 1.69
LINC00943-205ENST00000539315 PLEKHG2Q9H7P9 1386 aa25.57■■□□□ 1.68
LINC00943-205ENST00000539315 NPC1L1Q9UHC9 1359 aa25.57■■□□□ 1.68
LINC00943-205ENST00000539315 CNGB1Q14028 1251 aaPredicted RBP25.57■■□□□ 1.68
LINC00943-205ENST00000539315 CC2D1BQ5T0F9 858 aaKnown RBP25.57■■□□□ 1.68
LINC00943-205ENST00000539315 KIF13BQ9NQT8 1826 aa25.56■■□□□ 1.68
LINC00943-205ENST00000539315 RBM42Q9BTD8 480 aaKnown RBP25.56■■□□□ 1.68
LINC00943-205ENST00000539315 MYH14Q7Z406 1995 aaKnown RBP25.56■■□□□ 1.68
LINC00943-205ENST00000539315 RALBP1Q15311 655 aa25.55■■□□□ 1.68
LINC00943-205ENST00000539315 TRAPPC3LQ5T215 181 aa25.55■■□□□ 1.68
LINC00943-205ENST00000539315 ARHGEF1Q92888 912 aaKnown RBP25.55■■□□□ 1.68
LINC00943-205ENST00000539315 DCAF5Q96JK2 942 aa25.55■■□□□ 1.68
LINC00943-205ENST00000539315 RTCBQ9Y3I0 505 aaKnown RBP25.55■■□□□ 1.68
LINC00943-205ENST00000539315 KIAA1551Q9HCM1 1747 aa25.54■■□□□ 1.68
LINC00943-205ENST00000539315 RC3H1Q5TC82 1133 aaKnown RBP25.54■■□□□ 1.68
LINC00943-205ENST00000539315 ZNF831Q5JPB2 1677 aa25.54■■□□□ 1.68
LINC00943-205ENST00000539315 PXDNLA1KZ92 1463 aa25.53■■□□□ 1.68
LINC00943-205ENST00000539315 PLEKHO1Q53GL0 409 aaPredicted RBP25.53■■□□□ 1.68
LINC00943-205ENST00000539315 KDM6AO15550 1401 aaPredicted RBP25.53■■□□□ 1.68
LINC00943-205ENST00000539315 N4BP2Q86UW6 1770 aaPredicted RBP25.52■■□□□ 1.68
LINC00943-205ENST00000539315 HSP90AB1P08238 724 aaKnown RBP25.52■■□□□ 1.68
LINC00943-205ENST00000539315 MORC1Q86VD1 984 aa25.52■■□□□ 1.68
LINC00943-205ENST00000539315 NLGN1Q8N2Q7 840 aa25.52■■□□□ 1.68
LINC00943-205ENST00000539315 PRKRIP1Q9H875 184 aaPredicted RBP25.52■■□□□ 1.68
LINC00943-205ENST00000539315 A0A0G2JLW4 131 aa25.51■■□□□ 1.67
LINC00943-205ENST00000539315 GYS1P13807 737 aa25.51■■□□□ 1.67
LINC00943-205ENST00000539315 HSPA6P17066 643 aa25.51■■□□□ 1.67
LINC00943-205ENST00000539315 TGFB2P61812 414 aa25.51■■□□□ 1.67
LINC00943-205ENST00000539315 ZNF530Q6P9A1 599 aaPredicted RBP25.51■■□□□ 1.67
LINC00943-205ENST00000539315 CNTNAP4Q9C0A0 1308 aa25.51■■□□□ 1.67
LINC00943-205ENST00000539315 CICQ96RK0 1608 aaPredicted RBP25.51■■□□□ 1.67
LINC00943-205ENST00000539315 COL5A3P25940 1745 aaPredicted RBP25.51■■□□□ 1.67
LINC00943-205ENST00000539315 KIF3CO14782 793 aa25.5■■□□□ 1.67
LINC00943-205ENST00000539315 RPS6KA4O75676 772 aa25.5■■□□□ 1.67
LINC00943-205ENST00000539315 AEBP1Q8IUX7 1158 aa25.5■■□□□ 1.67
LINC00943-205ENST00000539315 ADRA2BP18089 450 aa25.49■■□□□ 1.67
LINC00943-205ENST00000539315 C10orf71Q711Q0 1435 aa25.48■■□□□ 1.67
LINC00943-205ENST00000539315 CABP4P57796 275 aa25.48■■□□□ 1.67
LINC00943-205ENST00000539315 AMOTQ4VCS5 1084 aa25.48■■□□□ 1.67
LINC00943-205ENST00000539315 DPEP1P16444 411 aa25.46■■□□□ 1.67
LINC00943-205ENST00000539315 RFC4P35249 363 aa25.46■■□□□ 1.67
LINC00943-205ENST00000539315 BCS1LQ9Y276 419 aa25.46■■□□□ 1.67
LINC00943-205ENST00000539315 PTCD1O75127 700 aaKnown RBP25.45■■□□□ 1.66
LINC00943-205ENST00000539315 MTHFSP49914 203 aa25.45■■□□□ 1.66
LINC00943-205ENST00000539315 MIER1Q8N108 512 aa25.45■■□□□ 1.66
LINC00943-205ENST00000539315 NFATC2IPQ8NCF5 419 aa25.45■■□□□ 1.66
LINC00943-205ENST00000539315 C4AP0C0L4 1744 aa25.45■■□□□ 1.66
LINC00943-205ENST00000539315 IFFO2Q5TF58 517 aa25.44■■□□□ 1.66
LINC00943-205ENST00000539315 CCDC87Q9NVE4 849 aa25.44■■□□□ 1.66
LINC00943-205ENST00000539315 BRCA1P38398 1863 aaKnown RBP25.43■■□□□ 1.66
LINC00943-205ENST00000539315 KCNA3P22001 575 aa25.43■■□□□ 1.66
LINC00943-205ENST00000539315 CRKLP46109 303 aaKnown RBP25.42■■□□□ 1.66
LINC00943-205ENST00000539315 SULT6B1Q6IMI4 303 aa25.42■■□□□ 1.66
LINC00943-205ENST00000539315 SRP68Q9UHB9 627 aaKnown RBP25.42■■□□□ 1.66
LINC00943-205ENST00000539315 PARP3Q9Y6F1 533 aa25.42■■□□□ 1.66
LINC00943-205ENST00000539315 C1orf141Q5JVX7 400 aa25.41■■□□□ 1.66
LINC00943-205ENST00000539315 ARHGAP27Q6ZUM4 889 aa25.41■■□□□ 1.66
LINC00943-205ENST00000539315 IL13P35225 146 aa25.4■■□□□ 1.66
LINC00943-205ENST00000539315 MYBBP1AQ9BQG0 1328 aaKnown RBP25.39■■□□□ 1.66
LINC00943-205ENST00000539315 FCHSD2O94868 740 aa25.39■■□□□ 1.66
LINC00943-205ENST00000539315 FKBP8Q14318 412 aa25.38■■□□□ 1.65
LINC00943-205ENST00000539315 TJP1Q07157 1748 aa25.37■■□□□ 1.65
LINC00943-205ENST00000539315 DDR1Q08345 913 aa25.37■■□□□ 1.65
LINC00943-205ENST00000539315 INTS5Q6P9B9 1019 aaKnown RBP25.37■■□□□ 1.65
LINC00943-205ENST00000539315 USP42Q9H9J4 1324 aaKnown RBP25.37■■□□□ 1.65
LINC00943-205ENST00000539315 SCN11AQ9UI33 1791 aa25.36■■□□□ 1.65
LINC00943-205ENST00000539315 PPP2R1AP30153 589 aa25.36■■□□□ 1.65
LINC00943-205ENST00000539315 CCER2I3L3R5 266 aa25.35■■□□□ 1.65
LINC00943-205ENST00000539315 ARFGEF1Q9Y6D6 1849 aa25.35■■□□□ 1.65
LINC00943-205ENST00000539315 ADAMTS7Q9UKP4 1686 aa25.34■■□□□ 1.65
LINC00943-205ENST00000539315 NMRK2Q9NPI5 230 aa25.34■■□□□ 1.65
LINC00943-205ENST00000539315 LGR6Q9HBX8 967 aa25.33■■□□□ 1.65
LINC00943-205ENST00000539315 PIM2Q9P1W9 311 aa25.33■■□□□ 1.65
LINC00943-205ENST00000539315 TOMM70O94826 608 aa25.32■■□□□ 1.64
LINC00943-205ENST00000539315 TM4SF1P30408 202 aa25.32■■□□□ 1.64
LINC00943-205ENST00000539315 AKAP4Q5JQC9 854 aa25.32■■□□□ 1.64
LINC00943-205ENST00000539315 C9orf131Q5VYM1 1079 aa25.32■■□□□ 1.64
LINC00943-205ENST00000539315 DNAJC10Q8IXB1 793 aa25.32■■□□□ 1.64
LINC00943-205ENST00000539315 POLRMTO00411 1230 aaKnown RBP25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms