RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 MRE11P49959 708 aa8.62□□□□□ -1.03
PROM1-219ENST00000539194 TCHHQ07283 1943 aa8.61□□□□□ -1.03
PROM1-219ENST00000539194 CLCN1P35523 988 aa8.61□□□□□ -1.03
PROM1-219ENST00000539194 RABEP1Q15276 862 aa8.61□□□□□ -1.03
PROM1-219ENST00000539194 GRPEL1Q9HAV7 217 aa8.61□□□□□ -1.03
PROM1-219ENST00000539194 ADAMTSL3P82987 1691 aa8.61□□□□□ -1.03
PROM1-219ENST00000539194 GOLGA6L3A6NEY3 463 aa8.61□□□□□ -1.03
PROM1-219ENST00000539194 PPP1R9BQ96SB3 815 aa8.6□□□□□ -1.03
PROM1-219ENST00000539194 SSFA2P28290 1259 aa8.6□□□□□ -1.03
PROM1-219ENST00000539194 HAP1P54257 671 aaPredicted RBP8.6□□□□□ -1.03
PROM1-219ENST00000539194 PDE1AP54750 535 aa8.6□□□□□ -1.03
PROM1-219ENST00000539194 PKP1Q13835 747 aa8.6□□□□□ -1.03
PROM1-219ENST00000539194 IL17REQ8NFR9 667 aa8.6□□□□□ -1.03
PROM1-219ENST00000539194 LMBRD1Q9NUN5 540 aa8.6□□□□□ -1.03
PROM1-219ENST00000539194 BAG4O95429 457 aaKnown RBP8.6□□□□□ -1.03
PROM1-219ENST00000539194 ZNF445P59923 1031 aa8.6□□□□□ -1.03
PROM1-219ENST00000539194 CUL4AQ13619 759 aa8.6□□□□□ -1.03
PROM1-219ENST00000539194 KLHL40Q2TBA0 621 aa8.6□□□□□ -1.03
PROM1-219ENST00000539194 EPB41L2O43491 1005 aaKnown RBP8.59□□□□□ -1.03
PROM1-219ENST00000539194 PLEKHG5O94827 1062 aa8.59□□□□□ -1.03
PROM1-219ENST00000539194 HOXC9P31274 260 aa8.59□□□□□ -1.03
PROM1-219ENST00000539194 POLA2Q14181 598 aa8.59□□□□□ -1.03
PROM1-219ENST00000539194 AMOTL2Q9Y2J4 779 aa8.59□□□□□ -1.03
PROM1-219ENST00000539194 AOX1Q06278 1338 aa8.59□□□□□ -1.03
PROM1-219ENST00000539194 MAP3K5Q99683 1374 aa8.59□□□□□ -1.03
PROM1-219ENST00000539194 SMARCA5O60264 1052 aaPredicted RBP8.59□□□□□ -1.03
PROM1-219ENST00000539194 SLC4A2P04920 1241 aa8.59□□□□□ -1.03
PROM1-219ENST00000539194 CCT4P50991 539 aaKnown RBP8.59□□□□□ -1.03
PROM1-219ENST00000539194 USP42Q9H9J4 1324 aaKnown RBP8.59□□□□□ -1.03
PROM1-219ENST00000539194 PKD1L3Q7Z443 1732 aa8.59□□□□□ -1.03
PROM1-219ENST00000539194 IL25Q9H293 177 aa8.59□□□□□ -1.03
PROM1-219ENST00000539194 ADGRL3Q9HAR2 1447 aa8.59□□□□□ -1.03
PROM1-219ENST00000539194 DDX60Q8IY21 1712 aaKnown RBP8.59□□□□□ -1.03
PROM1-219ENST00000539194 PARP4Q9UKK3 1724 aaKnown RBP8.59□□□□□ -1.03
PROM1-219ENST00000539194 PNMA6EA0A0J9YXQ4 647 aa8.58□□□□□ -1.04
PROM1-219ENST00000539194 SKOR2Q2VWA4 1001 aaPredicted RBP8.58□□□□□ -1.04
PROM1-219ENST00000539194 ATP8B2P98198 1209 aa8.58□□□□□ -1.04
PROM1-219ENST00000539194 MLECQ14165 292 aa8.58□□□□□ -1.04
PROM1-219ENST00000539194 USP44Q9H0E7 712 aa8.58□□□□□ -1.04
PROM1-219ENST00000539194 PXDNQ92626 1479 aa8.58□□□□□ -1.04
PROM1-219ENST00000539194 EIF5BO60841 1220 aaKnown RBP8.57□□□□□ -1.04
PROM1-219ENST00000539194 PTMSP20962 102 aa8.57□□□□□ -1.04
PROM1-219ENST00000539194 MIS18AQ9NYP9 233 aa8.57□□□□□ -1.04
PROM1-219ENST00000539194 SSH3Q8TE77 659 aa8.57□□□□□ -1.04
PROM1-219ENST00000539194 PDLIM2Q96JY6 352 aa8.57□□□□□ -1.04
PROM1-219ENST00000539194 LAMB4A4D0S4 1761 aa8.57□□□□□ -1.04
PROM1-219ENST00000539194 KIF1AQ12756 1690 aa8.57□□□□□ -1.04
PROM1-219ENST00000539194 UBR2Q8IWV8 1755 aa8.57□□□□□ -1.04
PROM1-219ENST00000539194 MYH15Q9Y2K3 1946 aa8.57□□□□□ -1.04
PROM1-219ENST00000539194 F6X3S4 739 aa8.56□□□□□ -1.04
PROM1-219ENST00000539194 GPT2Q8TD30 523 aa8.56□□□□□ -1.04
PROM1-219ENST00000539194 CWC22Q9HCG8 908 aaKnown RBP8.56□□□□□ -1.04
PROM1-219ENST00000539194 PAPPAQ13219 1627 aa8.56□□□□□ -1.04
PROM1-219ENST00000539194 NUP188Q5SRE5 1749 aa8.56□□□□□ -1.04
PROM1-219ENST00000539194 FLIIQ13045 1269 aa8.56□□□□□ -1.04
PROM1-219ENST00000539194 ZGPATQ8N5A5 531 aaKnown RBP8.56□□□□□ -1.04
PROM1-219ENST00000539194 PI4K2BQ8TCG2 481 aa8.56□□□□□ -1.04
PROM1-219ENST00000539194 GBP4Q96PP9 640 aa8.56□□□□□ -1.04
PROM1-219ENST00000539194 ESYT1Q9BSJ8 1104 aa8.56□□□□□ -1.04
PROM1-219ENST00000539194 ADCY9O60503 1353 aa8.56□□□□□ -1.04
PROM1-219ENST00000539194 UNC5CLQ8IV45 518 aa8.55□□□□□ -1.04
PROM1-219ENST00000539194 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.55□□□□□ -1.04
PROM1-219ENST00000539194 ARFGEF2Q9Y6D5 1785 aa8.55□□□□□ -1.04
PROM1-219ENST00000539194 ERC2O15083 957 aa8.55□□□□□ -1.04
PROM1-219ENST00000539194 CHMLP26374 656 aa8.55□□□□□ -1.04
PROM1-219ENST00000539194 ANAPC15P60006 121 aa8.55□□□□□ -1.04
PROM1-219ENST00000539194 PALD1Q9ULE6 856 aa8.55□□□□□ -1.04
PROM1-219ENST00000539194 STRCP1A6NGW2 1772 aa8.55□□□□□ -1.04
PROM1-219ENST00000539194 GNAT3A8MTJ3 354 aa8.55□□□□□ -1.04
PROM1-219ENST00000539194 HSP90AB1P08238 724 aaKnown RBP8.55□□□□□ -1.04
PROM1-219ENST00000539194 KCNB2Q92953 911 aa8.55□□□□□ -1.04
PROM1-219ENST00000539194 SLC26A8Q96RN1 970 aa8.55□□□□□ -1.04
PROM1-219ENST00000539194 TJP1Q07157 1748 aa8.55□□□□□ -1.04
PROM1-219ENST00000539194 BRD1O95696 1058 aa8.54□□□□□ -1.04
PROM1-219ENST00000539194 GNAI2P04899 355 aa8.54□□□□□ -1.04
PROM1-219ENST00000539194 MTX1Q13505 466 aa8.54□□□□□ -1.04
PROM1-219ENST00000539194 GZF1Q9H116 711 aaPredicted RBP8.54□□□□□ -1.04
PROM1-219ENST00000539194 TSPYL4Q9UJ04 414 aa8.54□□□□□ -1.04
PROM1-219ENST00000539194 LAMA4Q16363 1823 aa8.54□□□□□ -1.04
PROM1-219ENST00000539194 SHANK3Q9BYB0 1731 aa8.54□□□□□ -1.04
PROM1-219ENST00000539194 RPAP1Q9BWH6 1393 aaPredicted RBP8.54□□□□□ -1.04
PROM1-219ENST00000539194 JCADQ9P266 1359 aa8.54□□□□□ -1.04
PROM1-219ENST00000539194 HOXB7P09629 217 aa8.54□□□□□ -1.04
PROM1-219ENST00000539194 CEBPAP49715 358 aaPredicted RBP8.54□□□□□ -1.04
PROM1-219ENST00000539194 INTS4Q96HW7 963 aaKnown RBP8.54□□□□□ -1.04
PROM1-219ENST00000539194 NUCB2P80303 420 aa8.54□□□□□ -1.04
PROM1-219ENST00000539194 TTC14Q96N46 770 aa8.54□□□□□ -1.04
PROM1-219ENST00000539194 SNRKQ9NRH2 765 aa8.54□□□□□ -1.04
PROM1-219ENST00000539194 UTYO14607 1347 aa8.53□□□□□ -1.04
PROM1-219ENST00000539194 EIF4A1P60842 406 aaKnown RBP8.53□□□□□ -1.04
PROM1-219ENST00000539194 KCNA6P17658 529 aa8.53□□□□□ -1.04
PROM1-219ENST00000539194 BEND3Q5T5X7 828 aa8.53□□□□□ -1.04
PROM1-219ENST00000539194 NSFL1CQ9UNZ2 370 aaKnown RBP8.53□□□□□ -1.04
PROM1-219ENST00000539194 AFDNP55196 1824 aaKnown RBP8.53□□□□□ -1.04
PROM1-219ENST00000539194 MX1P20591 662 aa8.53□□□□□ -1.04
PROM1-219ENST00000539194 HSPA4P34932 840 aa8.53□□□□□ -1.04
PROM1-219ENST00000539194 TAF7Q15545 349 aaPredicted RBP8.53□□□□□ -1.04
PROM1-219ENST00000539194 CCDC30Q5VVM6 783 aa8.53□□□□□ -1.04
PROM1-219ENST00000539194 REC8O95072 547 aa8.52□□□□□ -1.05
PROM1-219ENST00000539194 ZSCAN23Q3MJ62 389 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms