RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 TRPC5Q9UL62 973 aaPredicted RBP19.88■□□□□ 0.77
VAMP1-207ENST00000539047 A0A0G2JS52 829 aa19.87■□□□□ 0.77
VAMP1-207ENST00000539047 MYT1Q01538 1121 aa19.87■□□□□ 0.77
VAMP1-207ENST00000539047 LGR6Q9HBX8 967 aa19.87■□□□□ 0.77
VAMP1-207ENST00000539047 ATRNO75882 1429 aa19.86■□□□□ 0.77
VAMP1-207ENST00000539047 THSD7AQ9UPZ6 1657 aa19.86■□□□□ 0.77
VAMP1-207ENST00000539047 DOT1LQ8TEK3 1739 aa19.85■□□□□ 0.77
VAMP1-207ENST00000539047 TOGARAM1Q9Y4F4 1720 aa19.85■□□□□ 0.77
VAMP1-207ENST00000539047 BTBD11A6QL63 1104 aa19.85■□□□□ 0.77
VAMP1-207ENST00000539047 CABP4P57796 275 aa19.85■□□□□ 0.77
VAMP1-207ENST00000539047 UPF1Q92900 1129 aaKnown RBP eCLIP19.85■□□□□ 0.77
VAMP1-207ENST00000539047 SLC52A2Q9HAB3 445 aa19.85■□□□□ 0.77
VAMP1-207ENST00000539047 SOS1Q07889 1333 aaPredicted RBP19.84■□□□□ 0.77
VAMP1-207ENST00000539047 GLI3P10071 1580 aa19.84■□□□□ 0.77
VAMP1-207ENST00000539047 ITGB4P16144 1822 aa19.84■□□□□ 0.77
VAMP1-207ENST00000539047 CANXP27824 592 aaKnown RBP19.84■□□□□ 0.77
VAMP1-207ENST00000539047 RBM6P78332 1123 aaKnown RBP19.84■□□□□ 0.77
VAMP1-207ENST00000539047 NKX1-1Q15270 411 aaPredicted RBP19.84■□□□□ 0.77
VAMP1-207ENST00000539047 CHMP4AQ9BY43 222 aa19.84■□□□□ 0.77
VAMP1-207ENST00000539047 ERVV-2B6SEH9 535 aa19.83■□□□□ 0.77
VAMP1-207ENST00000539047 FAM98CQ17RN3 349 aaKnown RBP19.83■□□□□ 0.77
VAMP1-207ENST00000539047 TWISTNBQ3B726 338 aaPredicted RBP19.83■□□□□ 0.77
VAMP1-207ENST00000539047 RRP1P56182 461 aaKnown RBP19.82■□□□□ 0.76
VAMP1-207ENST00000539047 GJD4Q96KN9 370 aaPredicted RBP19.82■□□□□ 0.76
VAMP1-207ENST00000539047 PAPPAQ13219 1627 aa19.81■□□□□ 0.76
VAMP1-207ENST00000539047 TTC5Q8N0Z6 440 aa19.81■□□□□ 0.76
VAMP1-207ENST00000539047 CACNA1FO60840 1977 aa19.81■□□□□ 0.76
VAMP1-207ENST00000539047 ALDH1L2Q3SY69 923 aa19.8■□□□□ 0.76
VAMP1-207ENST00000539047 SMC4Q9NTJ3 1288 aa19.8■□□□□ 0.76
VAMP1-207ENST00000539047 MIS18AQ9NYP9 233 aa19.8■□□□□ 0.76
VAMP1-207ENST00000539047 RGS12O14924 1447 aa19.79■□□□□ 0.76
VAMP1-207ENST00000539047 RARSP54136 660 aaKnown RBP19.79■□□□□ 0.76
VAMP1-207ENST00000539047 TMOD3Q9NYL9 352 aa19.79■□□□□ 0.76
VAMP1-207ENST00000539047 RNF123Q5XPI4 1314 aa19.78■□□□□ 0.76
VAMP1-207ENST00000539047 KIF16BQ96L93 1317 aa19.78■□□□□ 0.76
VAMP1-207ENST00000539047 LAMB4A4D0S4 1761 aa19.78■□□□□ 0.76
VAMP1-207ENST00000539047 UBR2Q8IWV8 1755 aa19.78■□□□□ 0.76
VAMP1-207ENST00000539047 NFATC2IPQ8NCF5 419 aa19.78■□□□□ 0.76
VAMP1-207ENST00000539047 KAT6BQ8WYB5 2073 aa19.78■□□□□ 0.76
VAMP1-207ENST00000539047 HOXB7P09629 217 aa19.77■□□□□ 0.76
VAMP1-207ENST00000539047 C8orf58Q8NAV2 365 aa19.77■□□□□ 0.76
VAMP1-207ENST00000539047 ELL2O00472 640 aaPredicted RBP19.76■□□□□ 0.75
VAMP1-207ENST00000539047 GTF3C3Q9Y5Q9 886 aa19.76■□□□□ 0.75
VAMP1-207ENST00000539047 VAMP4O75379 141 aa19.75■□□□□ 0.75
VAMP1-207ENST00000539047 MS4A1P11836 297 aa19.75■□□□□ 0.75
VAMP1-207ENST00000539047 ZNF790Q6PG37 636 aa19.75■□□□□ 0.75
VAMP1-207ENST00000539047 TSPYL6Q8N831 410 aa19.75■□□□□ 0.75
VAMP1-207ENST00000539047 STK31Q9BXU1 1019 aa19.75■□□□□ 0.75
VAMP1-207ENST00000539047 EIF4A1P60842 406 aaKnown RBP19.74■□□□□ 0.75
VAMP1-207ENST00000539047 C5P01031 1676 aa19.74■□□□□ 0.75
VAMP1-207ENST00000539047 IPO8O15397 1037 aaKnown RBP19.73■□□□□ 0.75
VAMP1-207ENST00000539047 BCAR3O75815 825 aa19.73■□□□□ 0.75
VAMP1-207ENST00000539047 FKBP8Q14318 412 aa19.73■□□□□ 0.75
VAMP1-207ENST00000539047 CCDC30Q5VVM6 783 aa19.73■□□□□ 0.75
VAMP1-207ENST00000539047 FRAT1Q92837 279 aaPredicted RBP19.73■□□□□ 0.75
VAMP1-207ENST00000539047 BCL2L13Q9BXK5 485 aa19.73■□□□□ 0.75
VAMP1-207ENST00000539047 MSH5O43196 834 aa19.72■□□□□ 0.75
VAMP1-207ENST00000539047 SSH1Q8WYL5 1049 aa19.72■□□□□ 0.75
VAMP1-207ENST00000539047 SYTL4Q96C24 671 aaPredicted RBP19.72■□□□□ 0.75
VAMP1-207ENST00000539047 FMNL2Q96PY5 1086 aa19.72■□□□□ 0.75
VAMP1-207ENST00000539047 KRT24Q2M2I5 525 aa19.71■□□□□ 0.75
VAMP1-207ENST00000539047 ZKSCAN2Q63HK3 967 aa19.71■□□□□ 0.75
VAMP1-207ENST00000539047 NHSQ6T4R5 1651 aa19.71■□□□□ 0.75
VAMP1-207ENST00000539047 HDGFL1Q5TGJ6 251 aa19.7■□□□□ 0.74
VAMP1-207ENST00000539047 ERICH6BQ5W0A0 696 aa19.7■□□□□ 0.74
VAMP1-207ENST00000539047 MARCH10Q8NA82 808 aaPredicted RBP19.7■□□□□ 0.74
VAMP1-207ENST00000539047 BRWD3Q6RI45 1802 aa19.69■□□□□ 0.74
VAMP1-207ENST00000539047 BCL9O00512 1426 aa19.69■□□□□ 0.74
VAMP1-207ENST00000539047 IRX6P78412 446 aaPredicted RBP19.69■□□□□ 0.74
VAMP1-207ENST00000539047 SLC39A6Q13433 755 aa19.69■□□□□ 0.74
VAMP1-207ENST00000539047 FTSJ3Q8IY81 847 aaKnown RBP19.69■□□□□ 0.74
VAMP1-207ENST00000539047 SEPT12Q8IYM1 358 aa19.69■□□□□ 0.74
VAMP1-207ENST00000539047 KCPQ6ZWJ8 1503 aa19.68■□□□□ 0.74
VAMP1-207ENST00000539047 KCNQ3O43525 872 aa19.68■□□□□ 0.74
VAMP1-207ENST00000539047 PLIN1O60240 522 aa19.68■□□□□ 0.74
VAMP1-207ENST00000539047 ONECUT3O60422 494 aaPredicted RBP19.68■□□□□ 0.74
VAMP1-207ENST00000539047 BRPF1P55201 1214 aaPredicted RBP19.68■□□□□ 0.74
VAMP1-207ENST00000539047 SNRPA1P09661 255 aaKnown RBP19.67■□□□□ 0.74
VAMP1-207ENST00000539047 PDE3AQ14432 1141 aa19.67■□□□□ 0.74
VAMP1-207ENST00000539047 SBF2Q86WG5 1849 aa19.67■□□□□ 0.74
VAMP1-207ENST00000539047 GIGYF1O75420 1035 aaPredicted RBP19.66■□□□□ 0.74
VAMP1-207ENST00000539047 MRPL50Q8N5N7 158 aaKnown RBP19.66■□□□□ 0.74
VAMP1-207ENST00000539047 HEG1Q9ULI3 1381 aa19.66■□□□□ 0.74
VAMP1-207ENST00000539047 EIF2S2P20042 333 aaKnown RBP19.65■□□□□ 0.74
VAMP1-207ENST00000539047 PRIM1P49642 420 aaKnown RBP19.65■□□□□ 0.74
VAMP1-207ENST00000539047 PIGBQ92521 554 aa19.65■□□□□ 0.74
VAMP1-207ENST00000539047 ZNF496Q96IT1 587 aaPredicted RBP19.65■□□□□ 0.74
VAMP1-207ENST00000539047 API5Q9BZZ5 524 aaKnown RBP19.65■□□□□ 0.74
VAMP1-207ENST00000539047 PTPRCP08575 1304 aa19.65■□□□□ 0.74
VAMP1-207ENST00000539047 EP400Q96L91 3159 aa19.65■□□□□ 0.74
VAMP1-207ENST00000539047 TCERG1O14776 1098 aaKnown RBP19.64■□□□□ 0.73
VAMP1-207ENST00000539047 ATF7IPQ6VMQ6 1270 aa19.64■□□□□ 0.73
VAMP1-207ENST00000539047 ARHGAP45Q92619 1136 aa19.64■□□□□ 0.73
VAMP1-207ENST00000539047 ACSBG1Q96GR2 724 aa19.64■□□□□ 0.73
VAMP1-207ENST00000539047 NOB1Q9ULX3 412 aaKnown RBP19.64■□□□□ 0.73
VAMP1-207ENST00000539047 BTAF1O14981 1849 aa19.64■□□□□ 0.73
VAMP1-207ENST00000539047 SLC4A2P04920 1241 aa19.63■□□□□ 0.73
VAMP1-207ENST00000539047 NECTIN2Q92692 538 aa19.63■□□□□ 0.73
VAMP1-207ENST00000539047 SMARCC1Q92922 1105 aaPredicted RBP19.63■□□□□ 0.73
VAMP1-207ENST00000539047 DBF4Q9UBU7 674 aaPredicted RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms