RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 NLGN1Q8N2Q7 840 aa19.65■□□□□ 0.74
PBX3-212ENST00000538998 BCS1LQ9Y276 419 aa19.65■□□□□ 0.74
PBX3-212ENST00000538998 C10orf71Q711Q0 1435 aa19.65■□□□□ 0.74
PBX3-212ENST00000538998 KIF13BQ9NQT8 1826 aa19.65■□□□□ 0.74
PBX3-212ENST00000538998 PHKG2P15735 406 aa19.64■□□□□ 0.73
PBX3-212ENST00000538998 RTCBQ9Y3I0 505 aaKnown RBP19.64■□□□□ 0.73
PBX3-212ENST00000538998 WASHC2AQ641Q2 1341 aa19.64■□□□□ 0.73
PBX3-212ENST00000538998 ANKRD26Q9UPS8 1709 aa19.63■□□□□ 0.73
PBX3-212ENST00000538998 TRAPPC3LQ5T215 181 aa19.63■□□□□ 0.73
PBX3-212ENST00000538998 ATG3Q9NT62 314 aa19.63■□□□□ 0.73
PBX3-212ENST00000538998 KIAA1551Q9HCM1 1747 aa19.62■□□□□ 0.73
PBX3-212ENST00000538998 KDRP35968 1356 aa19.62■□□□□ 0.73
PBX3-212ENST00000538998 PLEKHG2Q9H7P9 1386 aa19.62■□□□□ 0.73
PBX3-212ENST00000538998 A0A0G2JLW4 131 aa19.62■□□□□ 0.73
PBX3-212ENST00000538998 ADRA2BP18089 450 aa19.62■□□□□ 0.73
PBX3-212ENST00000538998 DNAJC5GQ8N7S2 189 aa19.62■□□□□ 0.73
PBX3-212ENST00000538998 EYA1Q99502 592 aa19.62■□□□□ 0.73
PBX3-212ENST00000538998 CARD14Q9BXL6 1004 aa19.62■□□□□ 0.73
PBX3-212ENST00000538998 ARHGAP27Q6ZUM4 889 aa19.61■□□□□ 0.73
PBX3-212ENST00000538998 CCDC87Q9NVE4 849 aa19.61■□□□□ 0.73
PBX3-212ENST00000538998 NMRK2Q9NPI5 230 aa19.6■□□□□ 0.73
PBX3-212ENST00000538998 RC3H1Q5TC82 1133 aaKnown RBP19.59■□□□□ 0.73
PBX3-212ENST00000538998 RBM46Q8TBY0 533 aaKnown RBP19.59■□□□□ 0.73
PBX3-212ENST00000538998 N4BP2Q86UW6 1770 aaPredicted RBP19.59■□□□□ 0.73
PBX3-212ENST00000538998 ZNF831Q5JPB2 1677 aa19.59■□□□□ 0.73
PBX3-212ENST00000538998 FCHSD2O94868 740 aa19.58■□□□□ 0.72
PBX3-212ENST00000538998 DPEP1P16444 411 aa19.58■□□□□ 0.72
PBX3-212ENST00000538998 ARHGEF1Q92888 912 aaKnown RBP19.58■□□□□ 0.72
PBX3-212ENST00000538998 PARP3Q9Y6F1 533 aa19.58■□□□□ 0.72
PBX3-212ENST00000538998 C4AP0C0L4 1744 aa19.58■□□□□ 0.72
PBX3-212ENST00000538998 CNTNAP4Q9C0A0 1308 aa19.57■□□□□ 0.72
PBX3-212ENST00000538998 ERVV-2B6SEH9 535 aa19.57■□□□□ 0.72
PBX3-212ENST00000538998 GYS1P13807 737 aa19.57■□□□□ 0.72
PBX3-212ENST00000538998 RFC4P35249 363 aa19.57■□□□□ 0.72
PBX3-212ENST00000538998 C16orf71Q8IYS4 520 aaPredicted RBP19.57■□□□□ 0.72
PBX3-212ENST00000538998 RBM42Q9BTD8 480 aaKnown RBP19.57■□□□□ 0.72
PBX3-212ENST00000538998 SLC4A9Q96Q91 983 aa19.56■□□□□ 0.72
PBX3-212ENST00000538998 RPS6KA4O75676 772 aa19.55■□□□□ 0.72
PBX3-212ENST00000538998 HSP90AB1P08238 724 aaKnown RBP19.55■□□□□ 0.72
PBX3-212ENST00000538998 C9orf131Q5VYM1 1079 aa19.55■□□□□ 0.72
PBX3-212ENST00000538998 POLKQ9UBT6 870 aa19.55■□□□□ 0.72
PBX3-212ENST00000538998 WDR90Q96KV7 1748 aa19.54■□□□□ 0.72
PBX3-212ENST00000538998 FSTL1Q12841 308 aa19.54■□□□□ 0.72
PBX3-212ENST00000538998 DCAF5Q96JK2 942 aa19.54■□□□□ 0.72
PBX3-212ENST00000538998 EIF4A2Q14240 407 aaKnown RBP19.53■□□□□ 0.72
PBX3-212ENST00000538998 PIM2Q9P1W9 311 aa19.53■□□□□ 0.72
PBX3-212ENST00000538998 COL5A3P25940 1745 aaPredicted RBP19.53■□□□□ 0.72
PBX3-212ENST00000538998 KDM2BQ8NHM5 1336 aa19.52■□□□□ 0.72
PBX3-212ENST00000538998 BRCA1P38398 1863 aaKnown RBP19.52■□□□□ 0.72
PBX3-212ENST00000538998 KCNA3P22001 575 aa19.52■□□□□ 0.72
PBX3-212ENST00000538998 KLRG1Q96E93 195 aa19.52■□□□□ 0.72
PBX3-212ENST00000538998 JMYQ8N9B5 988 aa19.51■□□□□ 0.71
PBX3-212ENST00000538998 DALRD3Q5D0E6 543 aaKnown RBP19.5■□□□□ 0.71
PBX3-212ENST00000538998 ARFGEF1Q9Y6D6 1849 aa19.5■□□□□ 0.71
PBX3-212ENST00000538998 CABP4P57796 275 aa19.49■□□□□ 0.71
PBX3-212ENST00000538998 PLEKHO1Q53GL0 409 aaPredicted RBP19.49■□□□□ 0.71
PBX3-212ENST00000538998 KCPQ6ZWJ8 1503 aa19.49■□□□□ 0.71
PBX3-212ENST00000538998 RNF181Q9P0P0 153 aa19.48■□□□□ 0.71
PBX3-212ENST00000538998 KDM6AO15550 1401 aaPredicted RBP19.48■□□□□ 0.71
PBX3-212ENST00000538998 CRKLP46109 303 aaKnown RBP19.47■□□□□ 0.71
PBX3-212ENST00000538998 HTRA3P83110 453 aa19.47■□□□□ 0.71
PBX3-212ENST00000538998 AMOTQ4VCS5 1084 aa19.47■□□□□ 0.71
PBX3-212ENST00000538998 ZNF530Q6P9A1 599 aaPredicted RBP19.47■□□□□ 0.71
PBX3-212ENST00000538998 USP42Q9H9J4 1324 aaKnown RBP19.47■□□□□ 0.71
PBX3-212ENST00000538998 TNNT2P45379 298 aaPredicted RBP19.46■□□□□ 0.71
PBX3-212ENST00000538998 PTCD1O75127 700 aaKnown RBP19.45■□□□□ 0.7
PBX3-212ENST00000538998 DDR1Q08345 913 aa19.45■□□□□ 0.7
PBX3-212ENST00000538998 FKBP8Q14318 412 aa19.45■□□□□ 0.7
PBX3-212ENST00000538998 COL13A1Q5TAT6 717 aaPredicted RBP19.45■□□□□ 0.7
PBX3-212ENST00000538998 SRP68Q9UHB9 627 aaKnown RBP19.45■□□□□ 0.7
PBX3-212ENST00000538998 TNRC6CQ9HCJ0 1690 aaKnown RBP19.45■□□□□ 0.7
PBX3-212ENST00000538998 SMC1BQ8NDV3 1235 aa19.44■□□□□ 0.7
PBX3-212ENST00000538998 RRAGCQ9HB90 399 aa19.44■□□□□ 0.7
PBX3-212ENST00000538998 MTHFSP49914 203 aa19.43■□□□□ 0.7
PBX3-212ENST00000538998 C1orf141Q5JVX7 400 aa19.43■□□□□ 0.7
PBX3-212ENST00000538998 ZC3H4Q9UPT8 1303 aaKnown RBP19.43■□□□□ 0.7
PBX3-212ENST00000538998 MYH14Q7Z406 1995 aaKnown RBP19.43■□□□□ 0.7
PBX3-212ENST00000538998 CHRNA5P30532 468 aa19.42■□□□□ 0.7
PBX3-212ENST00000538998 POLRMTO00411 1230 aaKnown RBP19.41■□□□□ 0.7
PBX3-212ENST00000538998 NFATC2IPQ8NCF5 419 aa19.41■□□□□ 0.7
PBX3-212ENST00000538998 ZPR1O75312 459 aa19.39■□□□□ 0.69
PBX3-212ENST00000538998 TM4SF1P30408 202 aa19.39■□□□□ 0.69
PBX3-212ENST00000538998 TNS4Q8IZW8 715 aa19.39■□□□□ 0.69
PBX3-212ENST00000538998 TJP1Q07157 1748 aa19.39■□□□□ 0.69
PBX3-212ENST00000538998 INTS5Q6P9B9 1019 aaKnown RBP19.38■□□□□ 0.69
PBX3-212ENST00000538998 ADAMTS7Q9UKP4 1686 aa19.36■□□□□ 0.69
PBX3-212ENST00000538998 CAPN15O75808 1086 aa19.36■□□□□ 0.69
PBX3-212ENST00000538998 LMNB1P20700 586 aa19.36■□□□□ 0.69
PBX3-212ENST00000538998 RASSF7Q02833 373 aa19.36■□□□□ 0.69
PBX3-212ENST00000538998 USPL1Q5W0Q7 1092 aa19.36■□□□□ 0.69
PBX3-212ENST00000538998 AEBP1Q8IUX7 1158 aa19.36■□□□□ 0.69
PBX3-212ENST00000538998 POLR3GLQ9BT43 218 aa19.36■□□□□ 0.69
PBX3-212ENST00000538998 SBF1O95248 1867 aa19.35■□□□□ 0.69
PBX3-212ENST00000538998 SOS1Q07889 1333 aaPredicted RBP19.35■□□□□ 0.69
PBX3-212ENST00000538998 GLTPD2A6NH11 291 aa19.35■□□□□ 0.69
PBX3-212ENST00000538998 VEGFAP15692 232 aaPredicted RBP19.35■□□□□ 0.69
PBX3-212ENST00000538998 PRELPP51888 382 aa19.35■□□□□ 0.69
PBX3-212ENST00000538998 SULT6B1Q6IMI4 303 aa19.33■□□□□ 0.68
PBX3-212ENST00000538998 DNAJC10Q8IXB1 793 aa19.33■□□□□ 0.68
PBX3-212ENST00000538998 NFIXQ14938 502 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms