RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 AK7Q96M32 723 aa20.28■□□□□ 0.84
RAB40B-202ENST00000538809 SYT17Q9BSW7 474 aa20.28■□□□□ 0.84
RAB40B-202ENST00000538809 ATG3Q9NT62 314 aa20.28■□□□□ 0.84
RAB40B-202ENST00000538809 MYH14Q7Z406 1995 aaKnown RBP20.28■□□□□ 0.84
RAB40B-202ENST00000538809 HMOX1P09601 288 aa20.27■□□□□ 0.84
RAB40B-202ENST00000538809 POLD1P28340 1107 aa20.27■□□□□ 0.84
RAB40B-202ENST00000538809 AMIGO3Q86WK7 504 aa20.27■□□□□ 0.84
RAB40B-202ENST00000538809 LINC00116Q8NCU8 138 aa20.27■□□□□ 0.84
RAB40B-202ENST00000538809 ERVV-2B6SEH9 535 aa20.26■□□□□ 0.83
RAB40B-202ENST00000538809 ITPK1Q13572 414 aa20.26■□□□□ 0.83
RAB40B-202ENST00000538809 SMIM5Q71RC9 77 aa20.26■□□□□ 0.83
RAB40B-202ENST00000538809 C4AP0C0L4 1744 aa20.26■□□□□ 0.83
RAB40B-202ENST00000538809 ADAMTS7Q9UKP4 1686 aa20.26■□□□□ 0.83
RAB40B-202ENST00000538809 MAP3K5Q99683 1374 aa20.25■□□□□ 0.83
RAB40B-202ENST00000538809 DCAF8L1A6NGE4 600 aa20.25■□□□□ 0.83
RAB40B-202ENST00000538809 DIAPH1O60610 1272 aaKnown RBP20.25■□□□□ 0.83
RAB40B-202ENST00000538809 PHF14O94880 888 aa20.25■□□□□ 0.83
RAB40B-202ENST00000538809 CICQ96RK0 1608 aaPredicted RBP20.24■□□□□ 0.83
RAB40B-202ENST00000538809 ATP6V1AP38606 617 aa20.24■□□□□ 0.83
RAB40B-202ENST00000538809 CABP4P57796 275 aa20.23■□□□□ 0.83
RAB40B-202ENST00000538809 RBM42Q9BTD8 480 aaKnown RBP20.23■□□□□ 0.83
RAB40B-202ENST00000538809 HMGB2P26583 209 aaKnown RBP20.22■□□□□ 0.83
RAB40B-202ENST00000538809 MRC1P22897 1456 aa20.22■□□□□ 0.83
RAB40B-202ENST00000538809 FLAD1Q8NFF5 587 aa20.21■□□□□ 0.83
RAB40B-202ENST00000538809 SLC4A9Q96Q91 983 aa20.21■□□□□ 0.83
RAB40B-202ENST00000538809 SIPA1L3O60292 1781 aaPredicted RBP20.21■□□□□ 0.83
RAB40B-202ENST00000538809 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.2■□□□□ 0.82
RAB40B-202ENST00000538809 GNPATO15228 680 aa20.2■□□□□ 0.82
RAB40B-202ENST00000538809 AKAP4Q5JQC9 854 aa20.2■□□□□ 0.82
RAB40B-202ENST00000538809 UBR2Q8IWV8 1755 aa20.2■□□□□ 0.82
RAB40B-202ENST00000538809 U2SURPO15042 1029 aaKnown RBP20.19■□□□□ 0.82
RAB40B-202ENST00000538809 YY1P25490 414 aa20.18■□□□□ 0.82
RAB40B-202ENST00000538809 SSFA2P28290 1259 aa20.18■□□□□ 0.82
RAB40B-202ENST00000538809 NFATC2IPQ8NCF5 419 aa20.18■□□□□ 0.82
RAB40B-202ENST00000538809 NLGN2Q8NFZ4 835 aa20.18■□□□□ 0.82
RAB40B-202ENST00000538809 MTHFSDQ2M296 383 aaKnown RBP20.17■□□□□ 0.82
RAB40B-202ENST00000538809 PTCD1O75127 700 aaKnown RBP20.16■□□□□ 0.82
RAB40B-202ENST00000538809 LGR6Q9HBX8 967 aa20.16■□□□□ 0.82
RAB40B-202ENST00000538809 RNMTO43148 476 aaKnown RBP20.15■□□□□ 0.82
RAB40B-202ENST00000538809 UTRNP46939 3433 aa20.14■□□□□ 0.82
RAB40B-202ENST00000538809 KIF13BQ9NQT8 1826 aa20.14■□□□□ 0.81
RAB40B-202ENST00000538809 KCPQ6ZWJ8 1503 aa20.14■□□□□ 0.81
RAB40B-202ENST00000538809 SLC52A2Q9HAB3 445 aa20.14■□□□□ 0.81
RAB40B-202ENST00000538809 CNTNAP4Q9C0A0 1308 aa20.13■□□□□ 0.81
RAB40B-202ENST00000538809 PPP2R1AP30153 589 aa20.13■□□□□ 0.81
RAB40B-202ENST00000538809 PELP1Q8IZL8 1130 aaKnown RBP20.13■□□□□ 0.81
RAB40B-202ENST00000538809 CFAP53Q96M91 514 aa20.13■□□□□ 0.81
RAB40B-202ENST00000538809 DLG5Q8TDM6 1919 aa20.13■□□□□ 0.81
RAB40B-202ENST00000538809 RTCBQ9Y3I0 505 aaKnown RBP20.12■□□□□ 0.81
RAB40B-202ENST00000538809 N4BP2Q86UW6 1770 aaPredicted RBP20.11■□□□□ 0.81
RAB40B-202ENST00000538809 KIAA1551Q9HCM1 1747 aa20.11■□□□□ 0.81
RAB40B-202ENST00000538809 GPR162Q16538 588 aa20.11■□□□□ 0.81
RAB40B-202ENST00000538809 GOLGB1Q14789 3259 aaKnown RBP20.1■□□□□ 0.81
RAB40B-202ENST00000538809 SLC39A6Q13433 755 aa20.1■□□□□ 0.81
RAB40B-202ENST00000538809 RC3H1Q5TC82 1133 aaKnown RBP20.09■□□□□ 0.81
RAB40B-202ENST00000538809 PRKAR2BP31323 418 aa20.08■□□□□ 0.81
RAB40B-202ENST00000538809 CRKLP46109 303 aaKnown RBP20.08■□□□□ 0.81
RAB40B-202ENST00000538809 TRAPPC3LQ5T215 181 aa20.08■□□□□ 0.81
RAB40B-202ENST00000538809 RPS6KA4O75676 772 aa20.07■□□□□ 0.8
RAB40B-202ENST00000538809 GAS2L2Q8NHY3 880 aa20.07■□□□□ 0.8
RAB40B-202ENST00000538809 RSPH6AQ9H0K4 717 aa20.07■□□□□ 0.8
RAB40B-202ENST00000538809 DNAJC10Q8IXB1 793 aa20.06■□□□□ 0.8
RAB40B-202ENST00000538809 ARHGEF1Q92888 912 aaKnown RBP20.06■□□□□ 0.8
RAB40B-202ENST00000538809 BRCA1P38398 1863 aaKnown RBP20.05■□□□□ 0.8
RAB40B-202ENST00000538809 MMP10P09238 476 aa20.05■□□□□ 0.8
RAB40B-202ENST00000538809 YBX3P16989 372 aaKnown RBP eCLIP20.05■□□□□ 0.8
RAB40B-202ENST00000538809 ADRA2BP18089 450 aa20.05■□□□□ 0.8
RAB40B-202ENST00000538809 PHACTR3Q96KR7 559 aa20.05■□□□□ 0.8
RAB40B-202ENST00000538809 NUDCQ9Y266 331 aa20.05■□□□□ 0.8
RAB40B-202ENST00000538809 CD2APQ9Y5K6 639 aa20.05■□□□□ 0.8
RAB40B-202ENST00000538809 GNAT3A8MTJ3 354 aa20.04■□□□□ 0.8
RAB40B-202ENST00000538809 U2AF1L5P0DN76 240 aaPredicted RBP20.04■□□□□ 0.8
RAB40B-202ENST00000538809 RFC4P35249 363 aa20.04■□□□□ 0.8
RAB40B-202ENST00000538809 U2AF1Q01081 240 aaKnown RBP eCLIP20.04■□□□□ 0.8
RAB40B-202ENST00000538809 AFDNP55196 1824 aaKnown RBP20.04■□□□□ 0.8
RAB40B-202ENST00000538809 IL17REQ8NFR9 667 aa20.03■□□□□ 0.8
RAB40B-202ENST00000538809 GYS1P13807 737 aa20.02■□□□□ 0.8
RAB40B-202ENST00000538809 TEFQ10587 303 aa20.02■□□□□ 0.8
RAB40B-202ENST00000538809 INTS5Q6P9B9 1019 aaKnown RBP20.02■□□□□ 0.8
RAB40B-202ENST00000538809 SRP68Q9UHB9 627 aaKnown RBP20.02■□□□□ 0.8
RAB40B-202ENST00000538809 WWC3Q9ULE0 1092 aa20.02■□□□□ 0.8
RAB40B-202ENST00000538809 CCDC87Q9NVE4 849 aa20.01■□□□□ 0.79
RAB40B-202ENST00000538809 TTC5Q8N0Z6 440 aa20■□□□□ 0.79
RAB40B-202ENST00000538809 C10orf71Q711Q0 1435 aa20■□□□□ 0.79
RAB40B-202ENST00000538809 SCN7AQ01118 1682 aa20■□□□□ 0.79
RAB40B-202ENST00000538809 USP42Q9H9J4 1324 aaKnown RBP20■□□□□ 0.79
RAB40B-202ENST00000538809 CEMIPQ8WUJ3 1361 aa19.99■□□□□ 0.79
RAB40B-202ENST00000538809 CYP19A1P11511 503 aaPredicted RBP19.99■□□□□ 0.79
RAB40B-202ENST00000538809 NLGN1Q8N2Q7 840 aa19.99■□□□□ 0.79
RAB40B-202ENST00000538809 SOS1Q07889 1333 aaPredicted RBP19.99■□□□□ 0.79
RAB40B-202ENST00000538809 PXDNLA1KZ92 1463 aa19.99■□□□□ 0.79
RAB40B-202ENST00000538809 COL15A1P39059 1388 aa19.98■□□□□ 0.79
RAB40B-202ENST00000538809 ZBTB1Q9Y2K1 713 aa19.98■□□□□ 0.79
RAB40B-202ENST00000538809 ZNF784Q8NCA9 323 aaPredicted RBP19.97■□□□□ 0.79
RAB40B-202ENST00000538809 LAMB4A4D0S4 1761 aa19.96■□□□□ 0.79
RAB40B-202ENST00000538809 BCORQ6W2J9 1755 aa19.96■□□□□ 0.79
RAB40B-202ENST00000538809 KDM3BQ7LBC6 1761 aa19.96■□□□□ 0.79
RAB40B-202ENST00000538809 FCHSD2O94868 740 aa19.96■□□□□ 0.79
RAB40B-202ENST00000538809 FKBP8Q14318 412 aa19.96■□□□□ 0.79
RAB40B-202ENST00000538809 ZNF790Q6PG37 636 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms