RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 EIF4A1P60842 406 aaKnown RBP25.71■■□□□ 1.71
DDX55-205ENST00000538744 G2E3Q7L622 706 aa25.71■■□□□ 1.71
DDX55-205ENST00000538744 SCN11AQ9UI33 1791 aa25.7■■□□□ 1.71
DDX55-205ENST00000538744 BTBD11A6QL63 1104 aa25.7■■□□□ 1.7
DDX55-205ENST00000538744 C1orf115Q9H7X2 142 aa25.7■■□□□ 1.7
DDX55-205ENST00000538744 N4BP2Q86UW6 1770 aaPredicted RBP25.7■■□□□ 1.7
DDX55-205ENST00000538744 MEGF6O75095 1541 aa25.69■■□□□ 1.7
DDX55-205ENST00000538744 PKD1L3Q7Z443 1732 aa25.69■■□□□ 1.7
DDX55-205ENST00000538744 CHMP4AQ9BY43 222 aa25.69■■□□□ 1.7
DDX55-205ENST00000538744 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.69■■□□□ 1.71e-6■■■□□ 17.8
DDX55-205ENST00000538744 SPG7Q9UQ90 795 aa25.68■■□□□ 1.7
DDX55-205ENST00000538744 HDGFL1Q5TGJ6 251 aa25.68■■□□□ 1.7
DDX55-205ENST00000538744 CCT4P50991 539 aaKnown RBP25.67■■□□□ 1.7
DDX55-205ENST00000538744 FLIIQ13045 1269 aa25.67■■□□□ 1.7
DDX55-205ENST00000538744 PRDM11Q9NQV5 511 aa25.67■■□□□ 1.7
DDX55-205ENST00000538744 MSH5O43196 834 aa25.66■■□□□ 1.7
DDX55-205ENST00000538744 NECTIN2Q92692 538 aa25.66■■□□□ 1.7
DDX55-205ENST00000538744 GCC1Q96CN9 775 aa25.66■■□□□ 1.7
DDX55-205ENST00000538744 NPM2Q86SE8 214 aaKnown RBP25.66■■□□□ 1.7
DDX55-205ENST00000538744 NUCB1Q02818 461 aa25.65■■□□□ 1.7
DDX55-205ENST00000538744 PARP4Q9UKK3 1724 aaKnown RBP25.64■■□□□ 1.7
DDX55-205ENST00000538744 PXDNLA1KZ92 1463 aa25.63■■□□□ 1.69
DDX55-205ENST00000538744 FKBP5Q13451 457 aaPredicted RBP25.63■■□□□ 1.69
DDX55-205ENST00000538744 SIRT2Q8IXJ6 389 aa25.63■■□□□ 1.69
DDX55-205ENST00000538744 F6X3S4 739 aa25.63■■□□□ 1.69
DDX55-205ENST00000538744 KCNQ3O43525 872 aa25.63■■□□□ 1.69
DDX55-205ENST00000538744 PHKG2P15735 406 aa25.63■■□□□ 1.69
DDX55-205ENST00000538744 SLC4A10Q6U841 1118 aa25.63■■□□□ 1.69
DDX55-205ENST00000538744 ATP10DQ9P241 1426 aa25.62■■□□□ 1.69
DDX55-205ENST00000538744 WDR17Q8IZU2 1322 aa25.62■■□□□ 1.69
DDX55-205ENST00000538744 IPO9Q96P70 1041 aaKnown RBP25.62■■□□□ 1.69
DDX55-205ENST00000538744 KDM6AO15550 1401 aaPredicted RBP25.61■■□□□ 1.69
DDX55-205ENST00000538744 IFNL2Q8IZJ0 200 aa25.61■■□□□ 1.69
DDX55-205ENST00000538744 COL5A2P05997 1499 aaPredicted RBP25.61■■□□□ 1.69
DDX55-205ENST00000538744 CHD1LQ86WJ1 897 aa25.6■■□□□ 1.69
DDX55-205ENST00000538744 RPAP2Q8IXW5 612 aaPredicted RBP25.6■■□□□ 1.69
DDX55-205ENST00000538744 ANKRD44Q8N8A2 993 aa25.6■■□□□ 1.69
DDX55-205ENST00000538744 MEIS3Q99687 375 aa25.6■■□□□ 1.69
DDX55-205ENST00000538744 EIF2S2P20042 333 aaKnown RBP25.59■■□□□ 1.69
DDX55-205ENST00000538744 HEG1Q9ULI3 1381 aa25.59■■□□□ 1.69
DDX55-205ENST00000538744 MRC1P22897 1456 aa25.58■■□□□ 1.68
DDX55-205ENST00000538744 ROBO1Q9Y6N7 1651 aa25.57■■□□□ 1.68
DDX55-205ENST00000538744 SLC52A2Q9HAB3 445 aa25.57■■□□□ 1.68
DDX55-205ENST00000538744 CEP85Q6P2H3 762 aa25.56■■□□□ 1.68
DDX55-205ENST00000538744 TOM1L2Q6ZVM7 507 aa25.56■■□□□ 1.68
DDX55-205ENST00000538744 LNPKQ9C0E8 428 aa25.56■■□□□ 1.68
DDX55-205ENST00000538744 HSP90AB1P08238 724 aaKnown RBP25.55■■□□□ 1.68
DDX55-205ENST00000538744 ANKRD45Q5TZF3 282 aa25.55■■□□□ 1.68
DDX55-205ENST00000538744 CHPF2Q9P2E5 772 aa25.55■■□□□ 1.68
DDX55-205ENST00000538744 GIGYF1O75420 1035 aaPredicted RBP25.54■■□□□ 1.68
DDX55-205ENST00000538744 DCAF5Q96JK2 942 aa25.54■■□□□ 1.68
DDX55-205ENST00000538744 PHAXQ9H814 394 aaKnown RBP25.54■■□□□ 1.68
DDX55-205ENST00000538744 CYP27B1O15528 508 aa25.54■■□□□ 1.68
DDX55-205ENST00000538744 AHDC1Q5TGY3 1603 aaPredicted RBP25.53■■□□□ 1.68
DDX55-205ENST00000538744 DCTPP1Q9H773 170 aa25.53■■□□□ 1.68
DDX55-205ENST00000538744 GNAI3P08754 354 aa25.52■■□□□ 1.68
DDX55-205ENST00000538744 DBF4Q9UBU7 674 aaPredicted RBP25.52■■□□□ 1.68
DDX55-205ENST00000538744 LTBP4Q8N2S1 1624 aa25.52■■□□□ 1.68
DDX55-205ENST00000538744 ERICH6Q7L0X2 663 aa25.51■■□□□ 1.68
DDX55-205ENST00000538744 GNAI2P04899 355 aa25.51■■□□□ 1.67
DDX55-205ENST00000538744 ZNF790Q6PG37 636 aa25.51■■□□□ 1.67
DDX55-205ENST00000538744 CARD10Q9BWT7 1032 aa25.51■■□□□ 1.67
DDX55-205ENST00000538744 NOP58Q9Y2X3 529 aaKnown RBP25.51■■□□□ 1.67
DDX55-205ENST00000538744 C5P01031 1676 aa25.5■■□□□ 1.67
DDX55-205ENST00000538744 HMMRO75330 724 aa25.5■■□□□ 1.67
DDX55-205ENST00000538744 DDRGK1Q96HY6 314 aa25.5■■□□□ 1.67
DDX55-205ENST00000538744 NFATC2IPQ8NCF5 419 aa25.49■■□□□ 1.67
DDX55-205ENST00000538744 PCDH11XQ9BZA7 1347 aa25.49■■□□□ 1.67
DDX55-205ENST00000538744 PCDH11YQ9BZA8 1340 aa25.49■■□□□ 1.67
DDX55-205ENST00000538744 ZBTB47Q9UFB7 747 aaPredicted RBP25.49■■□□□ 1.67
DDX55-205ENST00000538744 COL22A1Q8NFW1 1626 aaPredicted RBP25.48■■□□□ 1.67
DDX55-205ENST00000538744 EVA1CP58658 441 aa25.47■■□□□ 1.67
DDX55-205ENST00000538744 ZCRB1Q8TBF4 217 aaKnown RBP25.47■■□□□ 1.67
DDX55-205ENST00000538744 SHANK3Q9BYB0 1731 aa25.46■■□□□ 1.67
DDX55-205ENST00000538744 COL14A1Q05707 1796 aaKnown RBP25.46■■□□□ 1.67
DDX55-205ENST00000538744 IL2RBP14784 551 aa25.46■■□□□ 1.67
DDX55-205ENST00000538744 SLC39A6Q13433 755 aa25.46■■□□□ 1.67
DDX55-205ENST00000538744 STRN4Q9NRL3 753 aa25.46■■□□□ 1.67
DDX55-205ENST00000538744 LARP1Q6PKG0 1096 aaKnown RBP25.45■■□□□ 1.66
DDX55-205ENST00000538744 DNAAF4Q8WXU2 420 aa25.45■■□□□ 1.66
DDX55-205ENST00000538744 SRCIN1Q9C0H9 1055 aa25.45■■□□□ 1.66
DDX55-205ENST00000538744 ANXA1P04083 346 aa25.44■■□□□ 1.66
DDX55-205ENST00000538744 CABP4P57796 275 aa25.44■■□□□ 1.66
DDX55-205ENST00000538744 HYPKQ9NX55 129 aa25.44■■□□□ 1.66
DDX55-205ENST00000538744 PRAMEF22A3QJZ6 481 aa25.43■■□□□ 1.66
DDX55-205ENST00000538744 SEC24BO95487 1268 aa25.43■■□□□ 1.66
DDX55-205ENST00000538744 TTC5Q8N0Z6 440 aa25.43■■□□□ 1.66
DDX55-205ENST00000538744 ADCY9O60503 1353 aa25.43■■□□□ 1.66
DDX55-205ENST00000538744 PI4KAP2A4QPH2 592 aa25.43■■□□□ 1.66
DDX55-205ENST00000538744 PI4KAP1Q8N8J0 262 aa25.43■■□□□ 1.66
DDX55-205ENST00000538744 USP44Q9H0E7 712 aa25.43■■□□□ 1.66
DDX55-205ENST00000538744 UPF2Q9HAU5 1272 aaKnown RBP25.43■■□□□ 1.66
DDX55-205ENST00000538744 UBTFL1P0CB47 393 aaPredicted RBP25.42■■□□□ 1.66
DDX55-205ENST00000538744 BMP2KLQ5H9B9 411 aa25.42■■□□□ 1.66
DDX55-205ENST00000538744 DDX21Q9NR30 783 aaKnown RBP eCLIP25.42■■□□□ 1.66
DDX55-205ENST00000538744 LAMB4A4D0S4 1761 aa25.41■■□□□ 1.66
DDX55-205ENST00000538744 PROSER3Q2NL68 480 aa25.4■■□□□ 1.66
DDX55-205ENST00000538744 BEND3Q5T5X7 828 aa25.4■■□□□ 1.66
DDX55-205ENST00000538744 ZNF496Q96IT1 587 aaPredicted RBP25.4■■□□□ 1.66
DDX55-205ENST00000538744 FMNL2Q96PY5 1086 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms