RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.8□□□□□ -0.52
DDB1-212ENST00000538470 MSL1Q68DK7 614 aa11.8□□□□□ -0.52
DDB1-212ENST00000538470 ZNF784Q8NCA9 323 aaPredicted RBP11.8□□□□□ -0.52
DDB1-212ENST00000538470 LINC00116Q8NCU8 138 aa11.8□□□□□ -0.52
DDB1-212ENST00000538470 NLGN2Q8NFZ4 835 aa11.8□□□□□ -0.52
DDB1-212ENST00000538470 CD2APQ9Y5K6 639 aa11.8□□□□□ -0.52
DDB1-212ENST00000538470 MRC1P22897 1456 aa11.8□□□□□ -0.52
DDB1-212ENST00000538470 ADAMTS7Q9UKP4 1686 aa11.8□□□□□ -0.52
DDB1-212ENST00000538470 KIF7Q2M1P5 1343 aa11.8□□□□□ -0.52
DDB1-212ENST00000538470 AMER1Q5JTC6 1135 aaPredicted RBP11.79□□□□□ -0.52
DDB1-212ENST00000538470 ZNF530Q6P9A1 599 aaPredicted RBP11.79□□□□□ -0.52
DDB1-212ENST00000538470 ATG3Q9NT62 314 aa11.79□□□□□ -0.52
DDB1-212ENST00000538470 ASAP1Q9ULH1 1129 aa11.79□□□□□ -0.52
DDB1-212ENST00000538470 GOLGB1Q14789 3259 aaKnown RBP11.78□□□□□ -0.52
DDB1-212ENST00000538470 MYH14Q7Z406 1995 aaKnown RBP11.78□□□□□ -0.52
DDB1-212ENST00000538470 GNPATO15228 680 aa11.78□□□□□ -0.52
DDB1-212ENST00000538470 GRIN3BO60391 1043 aa11.78□□□□□ -0.52
DDB1-212ENST00000538470 PHF14O94880 888 aa11.78□□□□□ -0.52
DDB1-212ENST00000538470 ATP6V1AP38606 617 aa11.78□□□□□ -0.52
DDB1-212ENST00000538470 ITPK1Q13572 414 aa11.78□□□□□ -0.52
DDB1-212ENST00000538470 C1orf141Q5JVX7 400 aa11.78□□□□□ -0.52
DDB1-212ENST00000538470 CNTNAP4Q9C0A0 1308 aa11.78□□□□□ -0.52
DDB1-212ENST00000538470 KIAA1551Q9HCM1 1747 aa11.77□□□□□ -0.52
DDB1-212ENST00000538470 AMIGO3Q86WK7 504 aa11.77□□□□□ -0.53
DDB1-212ENST00000538470 PELP1Q8IZL8 1130 aaKnown RBP11.77□□□□□ -0.53
DDB1-212ENST00000538470 NPC1L1Q9UHC9 1359 aa11.77□□□□□ -0.53
DDB1-212ENST00000538470 ADRA2BP18089 450 aa11.76□□□□□ -0.53
DDB1-212ENST00000538470 IL13P35225 146 aa11.76□□□□□ -0.53
DDB1-212ENST00000538470 SULT6B1Q6IMI4 303 aa11.76□□□□□ -0.53
DDB1-212ENST00000538470 AEBP1Q8IUX7 1158 aa11.76□□□□□ -0.53
DDB1-212ENST00000538470 UBR2Q8IWV8 1755 aa11.75□□□□□ -0.53
DDB1-212ENST00000538470 BRCA1P38398 1863 aaKnown RBP11.75□□□□□ -0.53
DDB1-212ENST00000538470 YBX3P16989 372 aaKnown RBP eCLIP11.75□□□□□ -0.538e-12■□□□□ 11.1
DDB1-212ENST00000538470 MTHFSP49914 203 aa11.75□□□□□ -0.53
DDB1-212ENST00000538470 CABP4P57796 275 aa11.75□□□□□ -0.53
DDB1-212ENST00000538470 RC3H1Q5TC82 1133 aaKnown RBP11.75□□□□□ -0.53
DDB1-212ENST00000538470 RTCBQ9Y3I0 505 aaKnown RBP11.75□□□□□ -0.53
DDB1-212ENST00000538470 AKAP4Q5JQC9 854 aa11.74□□□□□ -0.53
DDB1-212ENST00000538470 RBM42Q9BTD8 480 aaKnown RBP11.74□□□□□ -0.53
DDB1-212ENST00000538470 C10orf71Q711Q0 1435 aa11.74□□□□□ -0.53
DDB1-212ENST00000538470 COL3A1P02461 1466 aaPredicted RBP11.74□□□□□ -0.53
DDB1-212ENST00000538470 PER1O15534 1290 aaPredicted RBP11.73□□□□□ -0.53
DDB1-212ENST00000538470 N4BP2Q86UW6 1770 aaPredicted RBP11.73□□□□□ -0.53
DDB1-212ENST00000538470 SLC4A9Q96Q91 983 aa11.73□□□□□ -0.53
DDB1-212ENST00000538470 ARFGEF1Q9Y6D6 1849 aa11.72□□□□□ -0.53
DDB1-212ENST00000538470 SIPA1L3O60292 1781 aaPredicted RBP11.72□□□□□ -0.53
DDB1-212ENST00000538470 TRAPPC3LQ5T215 181 aa11.72□□□□□ -0.53
DDB1-212ENST00000538470 KCPQ6ZWJ8 1503 aa11.71□□□□□ -0.53
DDB1-212ENST00000538470 PXDNLA1KZ92 1463 aa11.71□□□□□ -0.53
DDB1-212ENST00000538470 ADCY9O60503 1353 aa11.71□□□□□ -0.53
DDB1-212ENST00000538470 RPS6KA4O75676 772 aa11.71□□□□□ -0.53
DDB1-212ENST00000538470 SMIM5Q71RC9 77 aa11.71□□□□□ -0.53
DDB1-212ENST00000538470 NLGN1Q8N2Q7 840 aa11.71□□□□□ -0.53
DDB1-212ENST00000538470 DIAPH1O60610 1272 aaKnown RBP11.7□□□□□ -0.54
DDB1-212ENST00000538470 GIGYF1O75420 1035 aaPredicted RBP11.7□□□□□ -0.54
DDB1-212ENST00000538470 MMP10P09238 476 aa11.7□□□□□ -0.54
DDB1-212ENST00000538470 NFATC2IPQ8NCF5 419 aa11.7□□□□□ -0.54
DDB1-212ENST00000538470 ATP10DQ9P241 1426 aa11.69□□□□□ -0.54
DDB1-212ENST00000538470 GYS1P13807 737 aa11.69□□□□□ -0.54
DDB1-212ENST00000538470 RFC4P35249 363 aa11.69□□□□□ -0.54
DDB1-212ENST00000538470 CRKLP46109 303 aaKnown RBP11.69□□□□□ -0.54
DDB1-212ENST00000538470 CC2D1BQ5T0F9 858 aaKnown RBP11.69□□□□□ -0.54
DDB1-212ENST00000538470 ARHGEF1Q92888 912 aaKnown RBP11.69□□□□□ -0.54
DDB1-212ENST00000538470 SLC52A2Q9HAB3 445 aa11.69□□□□□ -0.54
DDB1-212ENST00000538470 PTCD1O75127 700 aaKnown RBP11.68□□□□□ -0.54
DDB1-212ENST00000538470 HMOX1P09601 288 aa11.68□□□□□ -0.54
DDB1-212ENST00000538470 C1QTNF8P60827 252 aa11.68□□□□□ -0.54
DDB1-212ENST00000538470 TGFB2P61812 414 aa11.68□□□□□ -0.54
DDB1-212ENST00000538470 CCDC87Q9NVE4 849 aa11.68□□□□□ -0.54
DDB1-212ENST00000538470 NRXN2Q9P2S2 1712 aa11.68□□□□□ -0.54
DDB1-212ENST00000538470 AFDNP55196 1824 aaKnown RBP11.67□□□□□ -0.54
DDB1-212ENST00000538470 DLEC1Q9Y238 1755 aa11.67□□□□□ -0.54
DDB1-212ENST00000538470 USP42Q9H9J4 1324 aaKnown RBP11.67□□□□□ -0.54
DDB1-212ENST00000538470 RNMTO43148 476 aaKnown RBP11.67□□□□□ -0.54
DDB1-212ENST00000538470 SCN7AQ01118 1682 aa11.67□□□□□ -0.54
DDB1-212ENST00000538470 MTHFSDQ2M296 383 aaKnown RBP11.66□□□□□ -0.54
DDB1-212ENST00000538470 PARP3Q9Y6F1 533 aa11.66□□□□□ -0.54
DDB1-212ENST00000538470 VSIG10Q8N0Z9 540 aa11.65□□□□□ -0.54
DDB1-212ENST00000538470 GAS2L2Q8NHY3 880 aa11.65□□□□□ -0.54
DDB1-212ENST00000538470 COL15A1P39059 1388 aa11.65□□□□□ -0.55
DDB1-212ENST00000538470 SOS1Q07889 1333 aaPredicted RBP11.64□□□□□ -0.55
DDB1-212ENST00000538470 INTS5Q6P9B9 1019 aaKnown RBP11.64□□□□□ -0.55
DDB1-212ENST00000538470 LGR6Q9HBX8 967 aa11.64□□□□□ -0.55
DDB1-212ENST00000538470 BCORQ6W2J9 1755 aa11.64□□□□□ -0.55
DDB1-212ENST00000538470 SENP3-EIF4A1A0A087X0R7 540 aa11.63□□□□□ -0.55
DDB1-212ENST00000538470 U2SURPO15042 1029 aaKnown RBP11.63□□□□□ -0.55
DDB1-212ENST00000538470 CYP19A1P11511 503 aaPredicted RBP11.63□□□□□ -0.55
DDB1-212ENST00000538470 DNAJC10Q8IXB1 793 aa11.63□□□□□ -0.55
DDB1-212ENST00000538470 CFAP53Q96M91 514 aa11.63□□□□□ -0.55
DDB1-212ENST00000538470 GPBP1L1Q9HC44 474 aaPredicted RBP11.63□□□□□ -0.55
DDB1-212ENST00000538470 SRP68Q9UHB9 627 aaKnown RBP11.63□□□□□ -0.55
DDB1-212ENST00000538470 GNAT3A8MTJ3 354 aa11.62□□□□□ -0.55
DDB1-212ENST00000538470 ZPR1O75312 459 aa11.62□□□□□ -0.55
DDB1-212ENST00000538470 TTC5Q8N0Z6 440 aa11.62□□□□□ -0.55
DDB1-212ENST00000538470 CEMIPQ8WUJ3 1361 aa11.62□□□□□ -0.55
DDB1-212ENST00000538470 DDR1Q08345 913 aa11.61□□□□□ -0.55
DDB1-212ENST00000538470 TEFQ10587 303 aa11.61□□□□□ -0.55
DDB1-212ENST00000538470 SLC39A6Q13433 755 aa11.61□□□□□ -0.55
DDB1-212ENST00000538470 FKBP8Q14318 412 aa11.61□□□□□ -0.55
DDB1-212ENST00000538470 WWC3Q9ULE0 1092 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms