RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 ZNF521Q96K83 1311 aa13.79□□□□□ -0.2
TNFRSF1A-211ENST00000538363 MEGF6O75095 1541 aa13.79□□□□□ -0.2
TNFRSF1A-211ENST00000538363 PKD1L3Q7Z443 1732 aa13.78□□□□□ -0.2
TNFRSF1A-211ENST00000538363 TSR2Q969E8 191 aaKnown RBP13.78□□□□□ -0.2
TNFRSF1A-211ENST00000538363 DCAF5Q96JK2 942 aa13.78□□□□□ -0.2
TNFRSF1A-211ENST00000538363 CFAP44Q96MT7 982 aa13.78□□□□□ -0.2
TNFRSF1A-211ENST00000538363 LGR6Q9HBX8 967 aa13.78□□□□□ -0.2
TNFRSF1A-211ENST00000538363 NCAPD2Q15021 1401 aa13.78□□□□□ -0.2
TNFRSF1A-211ENST00000538363 VIRMAQ69YN4 1812 aaKnown RBP13.78□□□□□ -0.2
TNFRSF1A-211ENST00000538363 OVOS2A0A0G2JMS6 1433 aa13.77□□□□□ -0.21
TNFRSF1A-211ENST00000538363 BARGINQ6ZT62 677 aa13.77□□□□□ -0.21
TNFRSF1A-211ENST00000538363 IL17REQ8NFR9 667 aa13.77□□□□□ -0.21
TNFRSF1A-211ENST00000538363 GJD4Q96KN9 370 aaPredicted RBP13.77□□□□□ -0.21
TNFRSF1A-211ENST00000538363 PLEKHG2Q9H7P9 1386 aa13.76□□□□□ -0.21
TNFRSF1A-211ENST00000538363 BTBD11A6QL63 1104 aa13.76□□□□□ -0.21
TNFRSF1A-211ENST00000538363 DUSP27Q5VZP5 1158 aa13.76□□□□□ -0.21
TNFRSF1A-211ENST00000538363 MIS18AQ9NYP9 233 aa13.76□□□□□ -0.21
TNFRSF1A-211ENST00000538363 RCAN3Q9UKA8 241 aa13.76□□□□□ -0.21
TNFRSF1A-211ENST00000538363 CYP27B1O15528 508 aa13.75□□□□□ -0.21
TNFRSF1A-211ENST00000538363 CANXP27824 592 aaKnown RBP13.75□□□□□ -0.21
TNFRSF1A-211ENST00000538363 EXOSC9Q06265 439 aaKnown RBP13.75□□□□□ -0.21
TNFRSF1A-211ENST00000538363 POTEAQ6S8J7 498 aa13.75□□□□□ -0.21
TNFRSF1A-211ENST00000538363 TTC5Q8N0Z6 440 aa13.75□□□□□ -0.21
TNFRSF1A-211ENST00000538363 SYTL4Q96C24 671 aaPredicted RBP13.75□□□□□ -0.21
TNFRSF1A-211ENST00000538363 DISP2A7MBM2 1401 aa13.74□□□□□ -0.21
TNFRSF1A-211ENST00000538363 RGS12O14924 1447 aa13.74□□□□□ -0.21
TNFRSF1A-211ENST00000538363 FANCIQ9NVI1 1328 aa13.74□□□□□ -0.21
TNFRSF1A-211ENST00000538363 MBIPQ9NS73 344 aa13.74□□□□□ -0.21
TNFRSF1A-211ENST00000538363 SUPT16HQ9Y5B9 1047 aaKnown RBP13.74□□□□□ -0.21
TNFRSF1A-211ENST00000538363 KAT6BQ8WYB5 2073 aa13.73□□□□□ -0.21
TNFRSF1A-211ENST00000538363 ELL2O00472 640 aaPredicted RBP13.73□□□□□ -0.21
TNFRSF1A-211ENST00000538363 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.73□□□□□ -0.21
TNFRSF1A-211ENST00000538363 NFATC2IPQ8NCF5 419 aa13.73□□□□□ -0.21
TNFRSF1A-211ENST00000538363 BABAM1Q9NWV8 329 aa13.73□□□□□ -0.21
TNFRSF1A-211ENST00000538363 TMOD3Q9NYL9 352 aa13.73□□□□□ -0.21
TNFRSF1A-211ENST00000538363 ERVV-2B6SEH9 535 aa13.72□□□□□ -0.21
TNFRSF1A-211ENST00000538363 CHL1O00533 1208 aa13.72□□□□□ -0.21
TNFRSF1A-211ENST00000538363 CHMP4AQ9BY43 222 aa13.72□□□□□ -0.21
TNFRSF1A-211ENST00000538363 SLC52A2Q9HAB3 445 aa13.72□□□□□ -0.21
TNFRSF1A-211ENST00000538363 DOT1LQ8TEK3 1739 aa13.72□□□□□ -0.21
TNFRSF1A-211ENST00000538363 TNS2Q63HR2 1409 aa13.72□□□□□ -0.21
TNFRSF1A-211ENST00000538363 TOGARAM1Q9Y4F4 1720 aa13.71□□□□□ -0.21
TNFRSF1A-211ENST00000538363 TRMT2AQ8IZ69 625 aaKnown RBP13.71□□□□□ -0.21
TNFRSF1A-211ENST00000538363 CT47B1P0C2W7 299 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF1A-211ENST00000538363 ZNF853P0CG23 659 aa13.7□□□□□ -0.22
TNFRSF1A-211ENST00000538363 RXRBP28702 533 aa13.7□□□□□ -0.22
TNFRSF1A-211ENST00000538363 RBM6P78332 1123 aaKnown RBP13.7□□□□□ -0.22
TNFRSF1A-211ENST00000538363 TWISTNBQ3B726 338 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF1A-211ENST00000538363 SEPT12Q8IYM1 358 aa13.7□□□□□ -0.22
TNFRSF1A-211ENST00000538363 NKX1-1Q15270 411 aaPredicted RBP13.69□□□□□ -0.22
TNFRSF1A-211ENST00000538363 FRAT1Q92837 279 aaPredicted RBP13.68□□□□□ -0.22
TNFRSF1A-211ENST00000538363 ACSBG1Q96GR2 724 aa13.68□□□□□ -0.22
TNFRSF1A-211ENST00000538363 STK31Q9BXU1 1019 aa13.68□□□□□ -0.22
TNFRSF1A-211ENST00000538363 SMC4Q9NTJ3 1288 aa13.68□□□□□ -0.22
TNFRSF1A-211ENST00000538363 CEMIPQ8WUJ3 1361 aa13.68□□□□□ -0.22
TNFRSF1A-211ENST00000538363 SLC39A6Q13433 755 aa13.67□□□□□ -0.22
TNFRSF1A-211ENST00000538363 MARCH10Q8NA82 808 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF1A-211ENST00000538363 SCN11AQ9UI33 1791 aa13.67□□□□□ -0.22
TNFRSF1A-211ENST00000538363 EIF2S2P20042 333 aaKnown RBP13.66□□□□□ -0.22
TNFRSF1A-211ENST00000538363 PRIM1P49642 420 aaKnown RBP13.66□□□□□ -0.22
TNFRSF1A-211ENST00000538363 C8orf58Q8NAV2 365 aa13.66□□□□□ -0.22
TNFRSF1A-211ENST00000538363 ZNF428Q96B54 188 aa13.66□□□□□ -0.22
TNFRSF1A-211ENST00000538363 FMNL2Q96PY5 1086 aa13.66□□□□□ -0.22
TNFRSF1A-211ENST00000538363 SBF2Q86WG5 1849 aa13.66□□□□□ -0.22
TNFRSF1A-211ENST00000538363 KDM6AO15550 1401 aaPredicted RBP13.65□□□□□ -0.22
TNFRSF1A-211ENST00000538363 TCERG1O14776 1098 aaKnown RBP13.65□□□□□ -0.22
TNFRSF1A-211ENST00000538363 IPO8O15397 1037 aaKnown RBP13.65□□□□□ -0.22
TNFRSF1A-211ENST00000538363 CCDC30Q5VVM6 783 aa13.65□□□□□ -0.22
TNFRSF1A-211ENST00000538363 ZNF790Q6PG37 636 aa13.65□□□□□ -0.22
TNFRSF1A-211ENST00000538363 NECTIN2Q92692 538 aa13.65□□□□□ -0.22
TNFRSF1A-211ENST00000538363 RBM42Q9BTD8 480 aaKnown RBP13.65□□□□□ -0.22
TNFRSF1A-211ENST00000538363 BCL2L13Q9BXK5 485 aa13.65□□□□□ -0.22
TNFRSF1A-211ENST00000538363 ITGB4P16144 1822 aa13.64□□□□□ -0.23
TNFRSF1A-211ENST00000538363 VAMP4O75379 141 aa13.64□□□□□ -0.23
TNFRSF1A-211ENST00000538363 EIF4A1P60842 406 aaKnown RBP13.64□□□□□ -0.23
TNFRSF1A-211ENST00000538363 KRT27Q7Z3Y8 459 aa13.64□□□□□ -0.23
TNFRSF1A-211ENST00000538363 TSPYL6Q8N831 410 aa13.64□□□□□ -0.23
TNFRSF1A-211ENST00000538363 KCNQ3O43525 872 aa13.63□□□□□ -0.23
TNFRSF1A-211ENST00000538363 PTCD1O75127 700 aaKnown RBP13.63□□□□□ -0.23
TNFRSF1A-211ENST00000538363 BCAR3O75815 825 aa13.63□□□□□ -0.23
TNFRSF1A-211ENST00000538363 MS4A1P11836 297 aa13.63□□□□□ -0.23
TNFRSF1A-211ENST00000538363 RARSP54136 660 aaKnown RBP13.63□□□□□ -0.23
TNFRSF1A-211ENST00000538363 MKRN4PQ13434 485 aaPredicted RBP13.63□□□□□ -0.23
TNFRSF1A-211ENST00000538363 KRT24Q2M2I5 525 aa13.63□□□□□ -0.23
TNFRSF1A-211ENST00000538363 ALDH1L2Q3SY69 923 aa13.63□□□□□ -0.23
TNFRSF1A-211ENST00000538363 FAM182BQ5T319 152 aa13.63□□□□□ -0.23
TNFRSF1A-211ENST00000538363 HDGFL1Q5TGJ6 251 aa13.63□□□□□ -0.23
TNFRSF1A-211ENST00000538363 SOS1Q07889 1333 aaPredicted RBP13.63□□□□□ -0.23
TNFRSF1A-211ENST00000538363 NHSQ6T4R5 1651 aa13.63□□□□□ -0.23
TNFRSF1A-211ENST00000538363 ONECUT3O60422 494 aaPredicted RBP13.62□□□□□ -0.23
TNFRSF1A-211ENST00000538363 SNRPA1P09661 255 aaKnown RBP13.62□□□□□ -0.23
TNFRSF1A-211ENST00000538363 RRP1P56182 461 aaKnown RBP13.62□□□□□ -0.23
TNFRSF1A-211ENST00000538363 IRX6P78412 446 aaPredicted RBP13.62□□□□□ -0.23
TNFRSF1A-211ENST00000538363 NPM2Q86SE8 214 aaKnown RBP13.62□□□□□ -0.23
TNFRSF1A-211ENST00000538363 PIGBQ92521 554 aa13.62□□□□□ -0.23
TNFRSF1A-211ENST00000538363 SMARCC1Q92922 1105 aaPredicted RBP13.62□□□□□ -0.23
TNFRSF1A-211ENST00000538363 TNS1Q9HBL0 1735 aaKnown RBP13.61□□□□□ -0.23
TNFRSF1A-211ENST00000538363 ADAMTS7Q9UKP4 1686 aa13.61□□□□□ -0.23
TNFRSF1A-211ENST00000538363 FKBP8Q14318 412 aa13.61□□□□□ -0.23
TNFRSF1A-211ENST00000538363 ZKSCAN2Q63HK3 967 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms