RNA–Protein interactions for RNA: ENST00000538361.1

C2CD3-211, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 863 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-211ENST00000538361 AKAP4Q5JQC9 854 aa17.89■□□□□ 0.45
C2CD3-211ENST00000538361 KDM6AO15550 1401 aaPredicted RBP17.89■□□□□ 0.45
C2CD3-211ENST00000538361 U2SURPO15042 1029 aaKnown RBP17.88■□□□□ 0.45
C2CD3-211ENST00000538361 COL23A1Q86Y22 540 aaPredicted RBP17.88■□□□□ 0.45
C2CD3-211ENST00000538361 FHDC1Q9C0D6 1143 aaPredicted RBP17.87■□□□□ 0.45
C2CD3-211ENST00000538361 COL24A1Q17RW2 1714 aa17.86■□□□□ 0.45
C2CD3-211ENST00000538361 SCN11AQ9UI33 1791 aa17.86■□□□□ 0.45
C2CD3-211ENST00000538361 NFATC2IPQ8NCF5 419 aa17.86■□□□□ 0.45
C2CD3-211ENST00000538361 SYT17Q9BSW7 474 aa17.86■□□□□ 0.45
C2CD3-211ENST00000538361 RBM42Q9BTD8 480 aaKnown RBP17.86■□□□□ 0.45
C2CD3-211ENST00000538361 COL3A1P02461 1466 aaPredicted RBP17.86■□□□□ 0.45
C2CD3-211ENST00000538361 LINC00116Q8NCU8 138 aa17.85■□□□□ 0.45
C2CD3-211ENST00000538361 NUDCQ9Y266 331 aa17.85■□□□□ 0.45
C2CD3-211ENST00000538361 PPP2R1AP30153 589 aa17.84■□□□□ 0.45
C2CD3-211ENST00000538361 ITPK1Q13572 414 aa17.84■□□□□ 0.45
C2CD3-211ENST00000538361 UBR3Q6ZT12 1888 aa17.84■□□□□ 0.45
C2CD3-211ENST00000538361 ZNF831Q5JPB2 1677 aa17.83■□□□□ 0.45
C2CD3-211ENST00000538361 MAP3K5Q99683 1374 aa17.83■□□□□ 0.45
C2CD3-211ENST00000538361 SSFA2P28290 1259 aa17.83■□□□□ 0.44
C2CD3-211ENST00000538361 MTHFSDQ2M296 383 aaKnown RBP17.83■□□□□ 0.44
C2CD3-211ENST00000538361 VIRMAQ69YN4 1812 aaKnown RBP17.82■□□□□ 0.44
C2CD3-211ENST00000538361 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.82■□□□□ 0.44
C2CD3-211ENST00000538361 GNPATO15228 680 aa17.81■□□□□ 0.44
C2CD3-211ENST00000538361 PHF14O94880 888 aa17.81■□□□□ 0.44
C2CD3-211ENST00000538361 GAS2L2Q8NHY3 880 aa17.81■□□□□ 0.44
C2CD3-211ENST00000538361 SLC52A2Q9HAB3 445 aa17.81■□□□□ 0.44
C2CD3-211ENST00000538361 LGR6Q9HBX8 967 aa17.81■□□□□ 0.44
C2CD3-211ENST00000538361 RNMTO43148 476 aaKnown RBP17.8■□□□□ 0.44
C2CD3-211ENST00000538361 PTCD1O75127 700 aaKnown RBP17.8■□□□□ 0.44
C2CD3-211ENST00000538361 RC3H1Q5TC82 1133 aaKnown RBP17.8■□□□□ 0.44
C2CD3-211ENST00000538361 KLHL34Q8N239 644 aa17.8■□□□□ 0.44
C2CD3-211ENST00000538361 MSL1Q68DK7 614 aa17.79■□□□□ 0.44
C2CD3-211ENST00000538361 SLC4A9Q96Q91 983 aa17.79■□□□□ 0.44
C2CD3-211ENST00000538361 RTCBQ9Y3I0 505 aaKnown RBP17.79■□□□□ 0.44
C2CD3-211ENST00000538361 AMIGO3Q86WK7 504 aa17.78■□□□□ 0.44
C2CD3-211ENST00000538361 COL5A3P25940 1745 aaPredicted RBP17.78■□□□□ 0.44
C2CD3-211ENST00000538361 CNTNAP4Q9C0A0 1308 aa17.77■□□□□ 0.44
C2CD3-211ENST00000538361 GNAT3A8MTJ3 354 aa17.77■□□□□ 0.44
C2CD3-211ENST00000538361 U2AF1L5P0DN76 240 aaPredicted RBP17.77■□□□□ 0.44
C2CD3-211ENST00000538361 U2AF1Q01081 240 aaKnown RBP eCLIP17.77■□□□□ 0.44
C2CD3-211ENST00000538361 TRAPPC3LQ5T215 181 aa17.77■□□□□ 0.44
C2CD3-211ENST00000538361 MRC1P22897 1456 aa17.76■□□□□ 0.43
C2CD3-211ENST00000538361 FCHSD2O94868 740 aa17.76■□□□□ 0.43
C2CD3-211ENST00000538361 PRKAR2BP31323 418 aa17.76■□□□□ 0.43
C2CD3-211ENST00000538361 RSPH6AQ9H0K4 717 aa17.76■□□□□ 0.43
C2CD3-211ENST00000538361 ADAMTS7Q9UKP4 1686 aa17.76■□□□□ 0.43
C2CD3-211ENST00000538361 SMIM5Q71RC9 77 aa17.75■□□□□ 0.43
C2CD3-211ENST00000538361 RPS6KA4O75676 772 aa17.74■□□□□ 0.43
C2CD3-211ENST00000538361 TEFQ10587 303 aa17.74■□□□□ 0.43
C2CD3-211ENST00000538361 RFC4P35249 363 aa17.73■□□□□ 0.43
C2CD3-211ENST00000538361 PHACTR3Q96KR7 559 aa17.73■□□□□ 0.43
C2CD3-211ENST00000538361 CD2APQ9Y5K6 639 aa17.73■□□□□ 0.43
C2CD3-211ENST00000538361 CICQ96RK0 1608 aaPredicted RBP17.72■□□□□ 0.43
C2CD3-211ENST00000538361 MYH14Q7Z406 1995 aaKnown RBP17.72■□□□□ 0.43
C2CD3-211ENST00000538361 NEFMP07197 916 aa17.72■□□□□ 0.43
C2CD3-211ENST00000538361 YY1P25490 414 aa17.72■□□□□ 0.43
C2CD3-211ENST00000538361 CRKLP46109 303 aaKnown RBP17.72■□□□□ 0.43
C2CD3-211ENST00000538361 SLC39A6Q13433 755 aa17.72■□□□□ 0.43
C2CD3-211ENST00000538361 RALBP1Q15311 655 aa17.72■□□□□ 0.43
C2CD3-211ENST00000538361 GPR162Q16538 588 aa17.72■□□□□ 0.43
C2CD3-211ENST00000538361 TTC5Q8N0Z6 440 aa17.72■□□□□ 0.43
C2CD3-211ENST00000538361 DDX10Q13206 875 aaKnown RBP17.71■□□□□ 0.43
C2CD3-211ENST00000538361 VSIG10Q8N0Z9 540 aa17.71■□□□□ 0.43
C2CD3-211ENST00000538361 NLGN1Q8N2Q7 840 aa17.71■□□□□ 0.43
C2CD3-211ENST00000538361 IL17REQ8NFR9 667 aa17.71■□□□□ 0.43
C2CD3-211ENST00000538361 ARHGEF1Q92888 912 aaKnown RBP17.71■□□□□ 0.43
C2CD3-211ENST00000538361 TJP1Q07157 1748 aa17.71■□□□□ 0.43
C2CD3-211ENST00000538361 UTRNP46939 3433 aa17.71■□□□□ 0.43
C2CD3-211ENST00000538361 DNAJC10Q8IXB1 793 aa17.7■□□□□ 0.42
C2CD3-211ENST00000538361 RTF1Q92541 710 aaKnown RBP17.7■□□□□ 0.42
C2CD3-211ENST00000538361 NLGN2Q8NFZ4 835 aa17.69■□□□□ 0.42
C2CD3-211ENST00000538361 PNNQ9H307 717 aaKnown RBP17.69■□□□□ 0.42
C2CD3-211ENST00000538361 ZNF790Q6PG37 636 aa17.68■□□□□ 0.42
C2CD3-211ENST00000538361 PELP1Q8IZL8 1130 aaKnown RBP17.68■□□□□ 0.42
C2CD3-211ENST00000538361 CCDC87Q9NVE4 849 aa17.68■□□□□ 0.42
C2CD3-211ENST00000538361 SIPA1L3O60292 1781 aaPredicted RBP17.68■□□□□ 0.42
C2CD3-211ENST00000538361 UBR2Q8IWV8 1755 aa17.68■□□□□ 0.42
C2CD3-211ENST00000538361 GOLGB1Q14789 3259 aaKnown RBP17.67■□□□□ 0.42
C2CD3-211ENST00000538361 KCPQ6ZWJ8 1503 aa17.67■□□□□ 0.42
C2CD3-211ENST00000538361 CEMIPQ8WUJ3 1361 aa17.67■□□□□ 0.42
C2CD3-211ENST00000538361 CHD4Q14839 1912 aa17.67■□□□□ 0.42
C2CD3-211ENST00000538361 MMP10P09238 476 aa17.67■□□□□ 0.42
C2CD3-211ENST00000538361 CYP19A1P11511 503 aaPredicted RBP17.67■□□□□ 0.42
C2CD3-211ENST00000538361 ZEB1P37275 1124 aaPredicted RBP17.67■□□□□ 0.42
C2CD3-211ENST00000538361 INTS5Q6P9B9 1019 aaKnown RBP17.67■□□□□ 0.42
C2CD3-211ENST00000538361 HTATSF1O43719 755 aaKnown RBP17.66■□□□□ 0.42
C2CD3-211ENST00000538361 STARD3NLO95772 234 aa17.66■□□□□ 0.42
C2CD3-211ENST00000538361 POTEDQ86YR6 584 aa17.66■□□□□ 0.42
C2CD3-211ENST00000538361 TEX13AQ9BXU3 409 aaPredicted RBP17.66■□□□□ 0.42
C2CD3-211ENST00000538361 C4AP0C0L4 1744 aa17.66■□□□□ 0.42
C2CD3-211ENST00000538361 BTBD11A6QL63 1104 aa17.65■□□□□ 0.42
C2CD3-211ENST00000538361 GYS1P13807 737 aa17.65■□□□□ 0.42
C2CD3-211ENST00000538361 GRIN3BO60391 1043 aa17.64■□□□□ 0.41
C2CD3-211ENST00000538361 ZPR1O75312 459 aa17.64■□□□□ 0.41
C2CD3-211ENST00000538361 ZNF496Q96IT1 587 aaPredicted RBP17.64■□□□□ 0.41
C2CD3-211ENST00000538361 FMNL2Q96PY5 1086 aa17.64■□□□□ 0.41
C2CD3-211ENST00000538361 USP42Q9H9J4 1324 aaKnown RBP17.64■□□□□ 0.41
C2CD3-211ENST00000538361 MCM10Q7L590 875 aa17.63■□□□□ 0.41
C2CD3-211ENST00000538361 PARP3Q9Y6F1 533 aa17.63■□□□□ 0.41
C2CD3-211ENST00000538361 SOS1Q07889 1333 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms