RNA–Protein interactions for RNA: ENST00000538288.1

CD6-208, Transcript of CD6 molecule, human

TSL 4

Gene CD6, Length 423 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD6-208	ENST00000538288	PPP2R1A	P30153	589 aa		27.96	■■■□□ 2.07
CD6-208	ENST00000538288	SGIP1	Q9BQI5	828 aa		27.95	■■■□□ 2.06
CD6-208	ENST00000538288	COL24A1	Q17RW2	1714 aa		27.95	■■■□□ 2.06
CD6-208	ENST00000538288	DCAF8L1	A6NGE4	600 aa		27.94	■■■□□ 2.06
CD6-208	ENST00000538288	ATP6V1A	P38606	617 aa		27.94	■■■□□ 2.06
CD6-208	ENST00000538288	MSH5	O43196	834 aa		27.93	■■■□□ 2.06
CD6-208	ENST00000538288	GAS2L2	Q8NHY3	880 aa		27.92	■■■□□ 2.06
CD6-208	ENST00000538288	ARX	Q96QS3	562 aa		27.92	■■■□□ 2.06
CD6-208	ENST00000538288	MRC1	P22897	1456 aa		27.91	■■■□□ 2.06
CD6-208	ENST00000538288	UBR3	Q6ZT12	1888 aa		27.9	■■■□□ 2.06
CD6-208	ENST00000538288	MTHFSD	Q2M296	383 aa	Known RBP	27.9	■■■□□ 2.06
CD6-208	ENST00000538288	COL23A1	Q86Y22	540 aa	Predicted RBP	27.9	■■■□□ 2.06
CD6-208	ENST00000538288	MAP3K5	Q99683	1374 aa		27.89	■■■□□ 2.06
CD6-208	ENST00000538288	ADAMTS7	Q9UKP4	1686 aa		27.89	■■■□□ 2.06
CD6-208	ENST00000538288	SSFA2	P28290	1259 aa		27.89	■■■□□ 2.06
CD6-208	ENST00000538288	NFATC2IP	Q8NCF5	419 aa		27.89	■■■□□ 2.06
CD6-208	ENST00000538288	RBM42	Q9BTD8	480 aa	Known RBP	27.89	■■■□□ 2.06
CD6-208	ENST00000538288	VIRMA	Q69YN4	1812 aa	Known RBP	27.88	■■■□□ 2.05
CD6-208	ENST00000538288	ZEB1	P37275	1124 aa	Predicted RBP	27.88	■■■□□ 2.05
CD6-208	ENST00000538288	LINC00116	Q8NCU8	138 aa		27.88	■■■□□ 2.05
CD6-208	ENST00000538288	SLC52A2	Q9HAB3	445 aa		27.88	■■■□□ 2.05
CD6-208	ENST00000538288	RNMT	O43148	476 aa	Known RBP	27.87	■■■□□ 2.05
CD6-208	ENST00000538288	ITPK1	Q13572	414 aa		27.86	■■■□□ 2.05
CD6-208	ENST00000538288	CIC	Q96RK0	1608 aa	Predicted RBP	27.85	■■■□□ 2.05
CD6-208	ENST00000538288	FHDC1	Q9C0D6	1143 aa	Predicted RBP	27.85	■■■□□ 2.05
CD6-208	ENST00000538288	COL5A3	P25940	1745 aa	Predicted RBP	27.84	■■■□□ 2.05
CD6-208	ENST00000538288	GNPAT	O15228	680 aa		27.84	■■■□□ 2.05
CD6-208	ENST00000538288	U2AF1L5	P0DN76	240 aa	Predicted RBP	27.84	■■■□□ 2.05
CD6-208	ENST00000538288	U2AF1	Q01081	240 aa	Known RBP eCLIP	27.84	■■■□□ 2.05
CD6-208	ENST00000538288	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	27.83	■■■□□ 2.05
CD6-208	ENST00000538288	GNAT3	A8MTJ3	354 aa		27.83	■■■□□ 2.05
CD6-208	ENST00000538288	PRKAR2B	P31323	418 aa		27.83	■■■□□ 2.05
CD6-208	ENST00000538288	RC3H1	Q5TC82	1133 aa	Known RBP	27.83	■■■□□ 2.05
CD6-208	ENST00000538288	RSPH6A	Q9H0K4	717 aa		27.83	■■■□□ 2.05
CD6-208	ENST00000538288	CNTNAP4	Q9C0A0	1308 aa		27.83	■■■□□ 2.05
CD6-208	ENST00000538288	FCHSD2	O94868	740 aa		27.82	■■■□□ 2.04
CD6-208	ENST00000538288	PHF14	O94880	888 aa		27.82	■■■□□ 2.04
CD6-208	ENST00000538288	RALBP1	Q15311	655 aa		27.82	■■■□□ 2.04
CD6-208	ENST00000538288	SYT17	Q9BSW7	474 aa		27.82	■■■□□ 2.04
CD6-208	ENST00000538288	LGR6	Q9HBX8	967 aa		27.81	■■■□□ 2.04
CD6-208	ENST00000538288	PTCD1	O75127	700 aa	Known RBP	27.8	■■■□□ 2.04
CD6-208	ENST00000538288	ADRA2B	P18089	450 aa		27.8	■■■□□ 2.04
CD6-208	ENST00000538288	RTCB	Q9Y3I0	505 aa	Known RBP	27.8	■■■□□ 2.04
CD6-208	ENST00000538288	NEFM	P07197	916 aa		27.79	■■■□□ 2.04
CD6-208	ENST00000538288	SLC4A9	Q96Q91	983 aa		27.79	■■■□□ 2.04
CD6-208	ENST00000538288	TEF	Q10587	303 aa		27.78	■■■□□ 2.04
CD6-208	ENST00000538288	DDX10	Q13206	875 aa	Known RBP	27.77	■■■□□ 2.04
CD6-208	ENST00000538288	TJP1	Q07157	1748 aa		27.76	■■■□□ 2.03
CD6-208	ENST00000538288	TRAPPC3L	Q5T215	181 aa		27.75	■■■□□ 2.03
CD6-208	ENST00000538288	MSL1	Q68DK7	614 aa		27.75	■■■□□ 2.03
CD6-208	ENST00000538288	TTC5	Q8N0Z6	440 aa		27.75	■■■□□ 2.03
CD6-208	ENST00000538288	AMIGO3	Q86WK7	504 aa		27.74	■■■□□ 2.03
CD6-208	ENST00000538288	KLHL34	Q8N239	644 aa		27.74	■■■□□ 2.03
CD6-208	ENST00000538288	PNN	Q9H307	717 aa	Known RBP	27.74	■■■□□ 2.03
CD6-208	ENST00000538288	RPS6KA4	O75676	772 aa		27.73	■■■□□ 2.03
CD6-208	ENST00000538288	VSIG10	Q8N0Z9	540 aa		27.73	■■■□□ 2.03
CD6-208	ENST00000538288	KCP	Q6ZWJ8	1503 aa		27.72	■■■□□ 2.03
CD6-208	ENST00000538288	RTF1	Q92541	710 aa	Known RBP	27.72	■■■□□ 2.03
CD6-208	ENST00000538288	PHACTR3	Q96KR7	559 aa		27.72	■■■□□ 2.03
CD6-208	ENST00000538288	UBR2	Q8IWV8	1755 aa		27.72	■■■□□ 2.03
CD6-208	ENST00000538288	CEMIP	Q8WUJ3	1361 aa		27.72	■■■□□ 2.03
CD6-208	ENST00000538288	SIPA1L3	O60292	1781 aa	Predicted RBP	27.71	■■■□□ 2.03
CD6-208	ENST00000538288	CRKL	P46109	303 aa	Known RBP	27.71	■■■□□ 2.03
CD6-208	ENST00000538288	IL17RE	Q8NFR9	667 aa		27.7	■■■□□ 2.02
CD6-208	ENST00000538288	MYH14	Q7Z406	1995 aa	Known RBP	27.69	■■■□□ 2.02
CD6-208	ENST00000538288	HTATSF1	O43719	755 aa	Known RBP	27.69	■■■□□ 2.02
CD6-208	ENST00000538288	RFC4	P35249	363 aa		27.69	■■■□□ 2.02
CD6-208	ENST00000538288	SLC39A6	Q13433	755 aa		27.69	■■■□□ 2.02
CD6-208	ENST00000538288	MYBBP1A	Q9BQG0	1328 aa	Known RBP	27.68	■■■□□ 2.02
CD6-208	ENST00000538288	NLGN1	Q8N2Q7	840 aa		27.67	■■■□□ 2.02
CD6-208	ENST00000538288	CD2AP	Q9Y5K6	639 aa		27.67	■■■□□ 2.02
CD6-208	ENST00000538288	DNAJC10	Q8IXB1	793 aa		27.66	■■■□□ 2.02
CD6-208	ENST00000538288	CCDC87	Q9NVE4	849 aa		27.66	■■■□□ 2.02
CD6-208	ENST00000538288	C4A	P0C0L4	1744 aa		27.66	■■■□□ 2.02
CD6-208	ENST00000538288	ZNF790	Q6PG37	636 aa		27.65	■■■□□ 2.02
CD6-208	ENST00000538288	SMIM5	Q71RC9	77 aa		27.65	■■■□□ 2.02
CD6-208	ENST00000538288	ARHGEF1	Q92888	912 aa	Known RBP	27.65	■■■□□ 2.02
CD6-208	ENST00000538288	MAPK8IP3	Q9UPT6	1336 aa		27.65	■■■□□ 2.02
CD6-208	ENST00000538288	TEX13A	Q9BXU3	409 aa	Predicted RBP	27.64	■■■□□ 2.02
CD6-208	ENST00000538288	STARD3NL	O95772	234 aa		27.63	■■■□□ 2.01
CD6-208	ENST00000538288	BTBD11	A6QL63	1104 aa		27.62	■■■□□ 2.01
CD6-208	ENST00000538288	CYP19A1	P11511	503 aa	Predicted RBP	27.62	■■■□□ 2.01
CD6-208	ENST00000538288	FMNL2	Q96PY5	1086 aa		27.62	■■■□□ 2.01
CD6-208	ENST00000538288	HEG1	Q9ULI3	1381 aa		27.61	■■■□□ 2.01
CD6-208	ENST00000538288	INTS5	Q6P9B9	1019 aa	Known RBP	27.61	■■■□□ 2.01
CD6-208	ENST00000538288	GPR162	Q16538	588 aa		27.6	■■■□□ 2.01
CD6-208	ENST00000538288	MMP10	P09238	476 aa		27.59	■■■□□ 2.01
CD6-208	ENST00000538288	GYS1	P13807	737 aa		27.59	■■■□□ 2.01
CD6-208	ENST00000538288	NLGN2	Q8NFZ4	835 aa		27.59	■■■□□ 2.01
CD6-208	ENST00000538288	SOS1	Q07889	1333 aa	Predicted RBP	27.59	■■■□□ 2.01
CD6-208	ENST00000538288	USP42	Q9H9J4	1324 aa	Known RBP	27.59	■■■□□ 2.01
CD6-208	ENST00000538288	ZNF496	Q96IT1	587 aa	Predicted RBP	27.58	■■■□□ 2.01
CD6-208	ENST00000538288	PLEKHF1	Q96S99	279 aa		27.58	■■■□□ 2.01
CD6-208	ENST00000538288	YY1	P25490	414 aa		27.57	■■■□□ 2
CD6-208	ENST00000538288	MCM10	Q7L590	875 aa		27.57	■■■□□ 2
CD6-208	ENST00000538288	ZPR1	O75312	459 aa		27.56	■■■□□ 2
CD6-208	ENST00000538288	NFE2L2	Q16236	605 aa		27.56	■■■□□ 2
CD6-208	ENST00000538288	COL15A1	P39059	1388 aa		27.56	■■■□□ 2
CD6-208	ENST00000538288	DLG5	Q8TDM6	1919 aa		27.55	■■■□□ 2
CD6-208	ENST00000538288	ZBTB1	Q9Y2K1	713 aa		27.55	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms