RNA–Protein interactions for RNA: ENST00000537856.7

TCF4-206, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-206ENST00000537856 U2AF1Q01081 240 aaKnown RBP eCLIP14.13□□□□□ -0.15
TCF4-206ENST00000537856 LY75O60449 1722 aa14.12□□□□□ -0.15
TCF4-206ENST00000537856 ATP6V1AP38606 617 aa14.12□□□□□ -0.15
TCF4-206ENST00000537856 GNAT3A8MTJ3 354 aa14.11□□□□□ -0.15
TCF4-206ENST00000537856 DDX10Q13206 875 aaKnown RBP14.11□□□□□ -0.15
TCF4-206ENST00000537856 ATG3Q9NT62 314 aa14.11□□□□□ -0.15
TCF4-206ENST00000537856 PAPPAQ13219 1627 aa14.1□□□□□ -0.15
TCF4-206ENST00000537856 ZBTB7AO95365 584 aa14.1□□□□□ -0.15
TCF4-206ENST00000537856 ZNF827Q17R98 1081 aa14.1□□□□□ -0.15
TCF4-206ENST00000537856 RTF1Q92541 710 aaKnown RBP14.1□□□□□ -0.15
TCF4-206ENST00000537856 RBM42Q9BTD8 480 aaKnown RBP14.1□□□□□ -0.15
TCF4-206ENST00000537856 SLC52A2Q9HAB3 445 aa14.1□□□□□ -0.15
TCF4-206ENST00000537856 RNMTO43148 476 aaKnown RBP14.09□□□□□ -0.15
TCF4-206ENST00000537856 TEFQ10587 303 aa14.09□□□□□ -0.15
TCF4-206ENST00000537856 MTHFSDQ2M296 383 aaKnown RBP14.09□□□□□ -0.15
TCF4-206ENST00000537856 NFATC2IPQ8NCF5 419 aa14.09□□□□□ -0.15
TCF4-206ENST00000537856 ASAP1Q9ULH1 1129 aa14.09□□□□□ -0.15
TCF4-206ENST00000537856 COL3A1P02461 1466 aaPredicted RBP14.09□□□□□ -0.15
TCF4-206ENST00000537856 ITGB4P16144 1822 aa14.09□□□□□ -0.15
TCF4-206ENST00000537856 HTATSF1O43719 755 aaKnown RBP14.09□□□□□ -0.15
TCF4-206ENST00000537856 SSFA2P28290 1259 aa14.09□□□□□ -0.15
TCF4-206ENST00000537856 RC3H1Q5TC82 1133 aaKnown RBP14.09□□□□□ -0.15
TCF4-206ENST00000537856 ATF5Q9Y2D1 282 aaPredicted RBP14.09□□□□□ -0.15
TCF4-206ENST00000537856 TTC5Q8N0Z6 440 aa14.08□□□□□ -0.16
TCF4-206ENST00000537856 PNPLA7Q6ZV29 1317 aa14.08□□□□□ -0.16
TCF4-206ENST00000537856 QSER1Q2KHR3 1735 aa14.08□□□□□ -0.16
TCF4-206ENST00000537856 MAP3K5Q99683 1374 aa14.07□□□□□ -0.16
TCF4-206ENST00000537856 ADRA2BP18089 450 aa14.07□□□□□ -0.16
TCF4-206ENST00000537856 PRKAR2BP31323 418 aa14.07□□□□□ -0.16
TCF4-206ENST00000537856 CASZ1Q86V15 1759 aa14.07□□□□□ -0.16
TCF4-206ENST00000537856 ARXQ96QS3 562 aa14.07□□□□□ -0.16
TCF4-206ENST00000537856 RTCBQ9Y3I0 505 aaKnown RBP14.07□□□□□ -0.16
TCF4-206ENST00000537856 TOGARAM1Q9Y4F4 1720 aa14.07□□□□□ -0.16
TCF4-206ENST00000537856 KDM6AO15550 1401 aaPredicted RBP14.06□□□□□ -0.16
TCF4-206ENST00000537856 TEX13AQ9BXU3 409 aaPredicted RBP14.06□□□□□ -0.16
TCF4-206ENST00000537856 RSPH6AQ9H0K4 717 aa14.06□□□□□ -0.16
TCF4-206ENST00000537856 MYBBP1AQ9BQG0 1328 aaKnown RBP14.06□□□□□ -0.16
TCF4-206ENST00000537856 KCNQ4P56696 695 aa14.05□□□□□ -0.16
TCF4-206ENST00000537856 MAPK8IP3Q9UPT6 1336 aa14.05□□□□□ -0.16
TCF4-206ENST00000537856 C5P01031 1676 aa14.05□□□□□ -0.16
TCF4-206ENST00000537856 TRAPPC3LQ5T215 181 aa14.05□□□□□ -0.16
TCF4-206ENST00000537856 VSIG10Q8N0Z9 540 aa14.05□□□□□ -0.16
TCF4-206ENST00000537856 CNTNAP4Q9C0A0 1308 aa14.05□□□□□ -0.16
TCF4-206ENST00000537856 GNPATO15228 680 aa14.04□□□□□ -0.16
TCF4-206ENST00000537856 COL23A1Q86Y22 540 aaPredicted RBP14.04□□□□□ -0.16
TCF4-206ENST00000537856 ZNF831Q5JPB2 1677 aa14.04□□□□□ -0.16
TCF4-206ENST00000537856 PTGER2P43116 358 aa14.03□□□□□ -0.16
TCF4-206ENST00000537856 PTCD1O75127 700 aaKnown RBP14.03□□□□□ -0.16
TCF4-206ENST00000537856 NPM2Q86SE8 214 aaKnown RBP14.03□□□□□ -0.16
TCF4-206ENST00000537856 LINC00116Q8NCU8 138 aa14.03□□□□□ -0.16
TCF4-206ENST00000537856 LGR6Q9HBX8 967 aa14.03□□□□□ -0.16
TCF4-206ENST00000537856 C4BP0C0L5 1744 aa14.02□□□□□ -0.16
TCF4-206ENST00000537856 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.02□□□□□ -0.16
TCF4-206ENST00000537856 RPS6KA4O75676 772 aa14.02□□□□□ -0.16
TCF4-206ENST00000537856 STARD3NLO95772 234 aa14.02□□□□□ -0.16
TCF4-206ENST00000537856 PNISRQ8TF01 805 aaKnown RBP14.02□□□□□ -0.16
TCF4-206ENST00000537856 SCN11AQ9UI33 1791 aa14.02□□□□□ -0.17
TCF4-206ENST00000537856 RFC4P35249 363 aa14.02□□□□□ -0.17
TCF4-206ENST00000537856 WDR43Q15061 677 aaKnown RBP eCLIP14.02□□□□□ -0.17
TCF4-206ENST00000537856 NLGN1Q8N2Q7 840 aa14.02□□□□□ -0.17
TCF4-206ENST00000537856 PDGFDQ9GZP0 370 aaPredicted RBP14.02□□□□□ -0.17
TCF4-206ENST00000537856 MRC1P22897 1456 aa14.01□□□□□ -0.17
TCF4-206ENST00000537856 PHF14O94880 888 aa14.01□□□□□ -0.17
TCF4-206ENST00000537856 LMOD3Q0VAK6 560 aa14.01□□□□□ -0.17
TCF4-206ENST00000537856 ITPK1Q13572 414 aa14.01□□□□□ -0.17
TCF4-206ENST00000537856 SGIP1Q9BQI5 828 aa14.01□□□□□ -0.17
TCF4-206ENST00000537856 RBM19Q9Y4C8 960 aaKnown RBP14□□□□□ -0.17
TCF4-206ENST00000537856 FMNL2Q96PY5 1086 aa14□□□□□ -0.17
TCF4-206ENST00000537856 TAF1LQ8IZX4 1826 aa14□□□□□ -0.17
TCF4-206ENST00000537856 A0A087WZG4 1122 aa13.99□□□□□ -0.17
TCF4-206ENST00000537856 BTBD11A6QL63 1104 aa13.99□□□□□ -0.17
TCF4-206ENST00000537856 PHACTR3Q96KR7 559 aa13.99□□□□□ -0.17
TCF4-206ENST00000537856 ZNF790Q6PG37 636 aa13.98□□□□□ -0.17
TCF4-206ENST00000537856 IL17REQ8NFR9 667 aa13.98□□□□□ -0.17
TCF4-206ENST00000537856 SYT17Q9BSW7 474 aa13.98□□□□□ -0.17
TCF4-206ENST00000537856 FHDC1Q9C0D6 1143 aaPredicted RBP13.98□□□□□ -0.17
TCF4-206ENST00000537856 CCDC87Q9NVE4 849 aa13.98□□□□□ -0.17
TCF4-206ENST00000537856 CEMIPQ8WUJ3 1361 aa13.98□□□□□ -0.17
TCF4-206ENST00000537856 CRKLP46109 303 aaKnown RBP13.98□□□□□ -0.17
TCF4-206ENST00000537856 ERICH6BQ5W0A0 696 aa13.98□□□□□ -0.17
TCF4-206ENST00000537856 CD2APQ9Y5K6 639 aa13.98□□□□□ -0.17
TCF4-206ENST00000537856 ZPR1O75312 459 aa13.97□□□□□ -0.17
TCF4-206ENST00000537856 NFE2L2Q16236 605 aa13.97□□□□□ -0.17
TCF4-206ENST00000537856 KLHL34Q8N239 644 aa13.97□□□□□ -0.17
TCF4-206ENST00000537856 PRKRIP1Q9H875 184 aaPredicted RBP13.97□□□□□ -0.17
TCF4-206ENST00000537856 ADAMTS7Q9UKP4 1686 aa13.97□□□□□ -0.17
TCF4-206ENST00000537856 TAF7Q15545 349 aaPredicted RBP13.96□□□□□ -0.17
TCF4-206ENST00000537856 SLC39A6Q13433 755 aa13.96□□□□□ -0.18
TCF4-206ENST00000537856 FANCIQ9NVI1 1328 aa13.95□□□□□ -0.18
TCF4-206ENST00000537856 ARHGEF1Q92888 912 aaKnown RBP13.95□□□□□ -0.18
TCF4-206ENST00000537856 SLC4A9Q96Q91 983 aa13.95□□□□□ -0.18
TCF4-206ENST00000537856 CICQ96RK0 1608 aaPredicted RBP13.94□□□□□ -0.18
TCF4-206ENST00000537856 CYP19A1P11511 503 aaPredicted RBP13.94□□□□□ -0.18
TCF4-206ENST00000537856 DNAJC10Q8IXB1 793 aa13.94□□□□□ -0.18
TCF4-206ENST00000537856 PARP3Q9Y6F1 533 aa13.94□□□□□ -0.18
TCF4-206ENST00000537856 HEG1Q9ULI3 1381 aa13.94□□□□□ -0.18
TCF4-206ENST00000537856 ANP32CO43423 234 aa13.94□□□□□ -0.18
TCF4-206ENST00000537856 MSL1Q68DK7 614 aa13.94□□□□□ -0.18
TCF4-206ENST00000537856 PLEKHF1Q96S99 279 aa13.94□□□□□ -0.18
TCF4-206ENST00000537856 BABAM1Q9NWV8 329 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms