RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 AMOTQ4VCS5 1084 aa13.21□□□□□ -0.29
CHD4-207ENST00000537634 AMIGO3Q86WK7 504 aa13.21□□□□□ -0.29
CHD4-207ENST00000537634 ATG3Q9NT62 314 aa13.21□□□□□ -0.29
CHD4-207ENST00000537634 CD2APQ9Y5K6 639 aa13.21□□□□□ -0.29
CHD4-207ENST00000537634 ZNF831Q5JPB2 1677 aa13.21□□□□□ -0.3
CHD4-207ENST00000537634 KDRP35968 1356 aa13.2□□□□□ -0.3
CHD4-207ENST00000537634 KIF7Q2M1P5 1343 aa13.2□□□□□ -0.3
CHD4-207ENST00000537634 GRIN3BO60391 1043 aa13.2□□□□□ -0.3
CHD4-207ENST00000537634 C1orf141Q5JVX7 400 aa13.2□□□□□ -0.3
CHD4-207ENST00000537634 SMIM5Q71RC9 77 aa13.2□□□□□ -0.3
CHD4-207ENST00000537634 AEBP1Q8IUX7 1158 aa13.2□□□□□ -0.3
CHD4-207ENST00000537634 KDM6AO15550 1401 aaPredicted RBP13.2□□□□□ -0.3
CHD4-207ENST00000537634 YBX3P16989 372 aaKnown RBP eCLIP13.19□□□□□ -0.34e-9■□□□□ 11.3
CHD4-207ENST00000537634 CABP4P57796 275 aa13.19□□□□□ -0.3
CHD4-207ENST00000537634 SULT6B1Q6IMI4 303 aa13.19□□□□□ -0.3
CHD4-207ENST00000537634 RBM42Q9BTD8 480 aaKnown RBP13.19□□□□□ -0.3
CHD4-207ENST00000537634 COL5A3P25940 1745 aaPredicted RBP13.19□□□□□ -0.3
CHD4-207ENST00000537634 MTHFSP49914 203 aa13.18□□□□□ -0.3
CHD4-207ENST00000537634 AMER1Q5JTC6 1135 aaPredicted RBP13.18□□□□□ -0.3
CHD4-207ENST00000537634 IL13P35225 146 aa13.17□□□□□ -0.3
CHD4-207ENST00000537634 RTCBQ9Y3I0 505 aaKnown RBP13.16□□□□□ -0.3
CHD4-207ENST00000537634 SCN11AQ9UI33 1791 aa13.16□□□□□ -0.3
CHD4-207ENST00000537634 SLC4A9Q96Q91 983 aa13.15□□□□□ -0.3
CHD4-207ENST00000537634 CNTNAP4Q9C0A0 1308 aa13.14□□□□□ -0.31
CHD4-207ENST00000537634 C4AP0C0L4 1744 aa13.14□□□□□ -0.31
CHD4-207ENST00000537634 ADRA2BP18089 450 aa13.14□□□□□ -0.31
CHD4-207ENST00000537634 TRAPPC3LQ5T215 181 aa13.14□□□□□ -0.31
CHD4-207ENST00000537634 RC3H1Q5TC82 1133 aaKnown RBP13.14□□□□□ -0.31
CHD4-207ENST00000537634 UTRNP46939 3433 aa13.14□□□□□ -0.31
CHD4-207ENST00000537634 CICQ96RK0 1608 aaPredicted RBP13.13□□□□□ -0.31
CHD4-207ENST00000537634 PTCD1O75127 700 aaKnown RBP13.13□□□□□ -0.31
CHD4-207ENST00000537634 MMP10P09238 476 aa13.13□□□□□ -0.31
CHD4-207ENST00000537634 CC2D1BQ5T0F9 858 aaKnown RBP13.13□□□□□ -0.31
CHD4-207ENST00000537634 NFATC2IPQ8NCF5 419 aa13.13□□□□□ -0.31
CHD4-207ENST00000537634 VIRMAQ69YN4 1812 aaKnown RBP13.13□□□□□ -0.31
CHD4-207ENST00000537634 TJP1Q07157 1748 aa13.13□□□□□ -0.31
CHD4-207ENST00000537634 KIF13BQ9NQT8 1826 aa13.12□□□□□ -0.31
CHD4-207ENST00000537634 GIGYF1O75420 1035 aaPredicted RBP13.12□□□□□ -0.31
CHD4-207ENST00000537634 RFC4P35249 363 aa13.12□□□□□ -0.31
CHD4-207ENST00000537634 C1QTNF8P60827 252 aa13.12□□□□□ -0.31
CHD4-207ENST00000537634 AKAP4Q5JQC9 854 aa13.12□□□□□ -0.31
CHD4-207ENST00000537634 MYH14Q7Z406 1995 aaKnown RBP13.12□□□□□ -0.31
CHD4-207ENST00000537634 PER1O15534 1290 aaPredicted RBP13.11□□□□□ -0.31
CHD4-207ENST00000537634 DIAPH1O60610 1272 aaKnown RBP13.11□□□□□ -0.31
CHD4-207ENST00000537634 RPS6KA4O75676 772 aa13.11□□□□□ -0.31
CHD4-207ENST00000537634 HMOX1P09601 288 aa13.11□□□□□ -0.31
CHD4-207ENST00000537634 NLGN1Q8N2Q7 840 aa13.11□□□□□ -0.31
CHD4-207ENST00000537634 ARHGEF1Q92888 912 aaKnown RBP13.11□□□□□ -0.31
CHD4-207ENST00000537634 WWC3Q9ULE0 1092 aa13.11□□□□□ -0.31
CHD4-207ENST00000537634 MRC1P22897 1456 aa13.1□□□□□ -0.31
CHD4-207ENST00000537634 CRKLP46109 303 aaKnown RBP13.1□□□□□ -0.31
CHD4-207ENST00000537634 ATP10DQ9P241 1426 aa13.1□□□□□ -0.31
CHD4-207ENST00000537634 NPC1L1Q9UHC9 1359 aa13.09□□□□□ -0.31
CHD4-207ENST00000537634 GYS1P13807 737 aa13.09□□□□□ -0.31
CHD4-207ENST00000537634 C10orf71Q711Q0 1435 aa13.09□□□□□ -0.31
CHD4-207ENST00000537634 SLC52A2Q9HAB3 445 aa13.09□□□□□ -0.31
CHD4-207ENST00000537634 KIAA1551Q9HCM1 1747 aa13.09□□□□□ -0.31
CHD4-207ENST00000537634 CCDC87Q9NVE4 849 aa13.09□□□□□ -0.31
CHD4-207ENST00000537634 N4BP2Q86UW6 1770 aaPredicted RBP13.09□□□□□ -0.31
CHD4-207ENST00000537634 PXDNLA1KZ92 1463 aa13.09□□□□□ -0.31
CHD4-207ENST00000537634 SENP3-EIF4A1A0A087X0R7 540 aa13.08□□□□□ -0.32
CHD4-207ENST00000537634 CNGB1Q14028 1251 aaPredicted RBP13.08□□□□□ -0.32
CHD4-207ENST00000537634 PARP3Q9Y6F1 533 aa13.08□□□□□ -0.32
CHD4-207ENST00000537634 ADAMTS7Q9UKP4 1686 aa13.08□□□□□ -0.32
CHD4-207ENST00000537634 RNMTO43148 476 aaKnown RBP13.07□□□□□ -0.32
CHD4-207ENST00000537634 TGFB2P61812 414 aa13.07□□□□□ -0.32
CHD4-207ENST00000537634 LGR6Q9HBX8 967 aa13.07□□□□□ -0.32
CHD4-207ENST00000537634 COL3A1P02461 1466 aaPredicted RBP13.07□□□□□ -0.32
CHD4-207ENST00000537634 ADCY9O60503 1353 aa13.07□□□□□ -0.32
CHD4-207ENST00000537634 GOLGB1Q14789 3259 aaKnown RBP13.06□□□□□ -0.32
CHD4-207ENST00000537634 MTHFSDQ2M296 383 aaKnown RBP13.06□□□□□ -0.32
CHD4-207ENST00000537634 KCPQ6ZWJ8 1503 aa13.06□□□□□ -0.32
CHD4-207ENST00000537634 USP42Q9H9J4 1324 aaKnown RBP13.06□□□□□ -0.32
CHD4-207ENST00000537634 U2SURPO15042 1029 aaKnown RBP13.05□□□□□ -0.32
CHD4-207ENST00000537634 SLC39A6Q13433 755 aa13.05□□□□□ -0.32
CHD4-207ENST00000537634 DNAJC10Q8IXB1 793 aa13.05□□□□□ -0.32
CHD4-207ENST00000537634 GPBP1L1Q9HC44 474 aaPredicted RBP13.05□□□□□ -0.32
CHD4-207ENST00000537634 SRP68Q9UHB9 627 aaKnown RBP13.05□□□□□ -0.32
CHD4-207ENST00000537634 UBR2Q8IWV8 1755 aa13.04□□□□□ -0.32
CHD4-207ENST00000537634 BRCA1P38398 1863 aaKnown RBP13.04□□□□□ -0.32
CHD4-207ENST00000537634 A0A0G2JLW4 131 aa13.04□□□□□ -0.32
CHD4-207ENST00000537634 INTS5Q6P9B9 1019 aaKnown RBP13.04□□□□□ -0.32
CHD4-207ENST00000537634 ZNF526Q8TF50 670 aaPredicted RBP13.04□□□□□ -0.32
CHD4-207ENST00000537634 BCS1LQ9Y276 419 aa13.04□□□□□ -0.32
CHD4-207ENST00000537634 ZPR1O75312 459 aa13.03□□□□□ -0.32
CHD4-207ENST00000537634 DPEP1P16444 411 aa13.03□□□□□ -0.32
CHD4-207ENST00000537634 FKBP8Q14318 412 aa13.03□□□□□ -0.32
CHD4-207ENST00000537634 SOS1Q07889 1333 aaPredicted RBP13.03□□□□□ -0.32
CHD4-207ENST00000537634 CYP19A1P11511 503 aaPredicted RBP13.02□□□□□ -0.33
CHD4-207ENST00000537634 TTC5Q8N0Z6 440 aa13.02□□□□□ -0.33
CHD4-207ENST00000537634 VSIG10Q8N0Z9 540 aa13.02□□□□□ -0.33
CHD4-207ENST00000537634 GAS2L2Q8NHY3 880 aa13.02□□□□□ -0.33
CHD4-207ENST00000537634 CFAP53Q96M91 514 aa13.02□□□□□ -0.33
CHD4-207ENST00000537634 COL15A1P39059 1388 aa13.02□□□□□ -0.33
CHD4-207ENST00000537634 ARFGEF1Q9Y6D6 1849 aa13.02□□□□□ -0.33
CHD4-207ENST00000537634 GNAT3A8MTJ3 354 aa13.01□□□□□ -0.33
CHD4-207ENST00000537634 FCHSD2O94868 740 aa13.01□□□□□ -0.33
CHD4-207ENST00000537634 DDR1Q08345 913 aa13.01□□□□□ -0.33
CHD4-207ENST00000537634 TEFQ10587 303 aa13.01□□□□□ -0.33
CHD4-207ENST00000537634 USPL1Q5W0Q7 1092 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms