RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 SEPT12Q8IYM1 358 aa20.35■□□□□ 0.85
SFSWAP-206ENST00000537582 NFATC2IPQ8NCF5 419 aa20.35■□□□□ 0.85
SFSWAP-206ENST00000537582 SLC52A2Q9HAB3 445 aa20.35■□□□□ 0.85
SFSWAP-206ENST00000537582 TSPYL4Q9UJ04 414 aa20.35■□□□□ 0.85
SFSWAP-206ENST00000537582 SIPA1L3O60292 1781 aaPredicted RBP20.35■□□□□ 0.85
SFSWAP-206ENST00000537582 KCNQ3O43525 872 aa20.34■□□□□ 0.85
SFSWAP-206ENST00000537582 FAM182BQ5T319 152 aa20.34■□□□□ 0.85
SFSWAP-206ENST00000537582 POTEAQ6S8J7 498 aa20.34■□□□□ 0.85
SFSWAP-206ENST00000537582 BTBD11A6QL63 1104 aa20.32■□□□□ 0.84
SFSWAP-206ENST00000537582 CABP4P57796 275 aa20.32■□□□□ 0.84
SFSWAP-206ENST00000537582 TSPYL6Q8N831 410 aa20.32■□□□□ 0.84
SFSWAP-206ENST00000537582 RBM6P78332 1123 aaKnown RBP20.31■□□□□ 0.84
SFSWAP-206ENST00000537582 SLC39A6Q13433 755 aa20.31■□□□□ 0.84
SFSWAP-206ENST00000537582 C8orf58Q8NAV2 365 aa20.31■□□□□ 0.84
SFSWAP-206ENST00000537582 DOT1LQ8TEK3 1739 aa20.31■□□□□ 0.84
SFSWAP-206ENST00000537582 ELL2O00472 640 aaPredicted RBP20.3■□□□□ 0.84
SFSWAP-206ENST00000537582 ACSBG1Q96GR2 724 aa20.3■□□□□ 0.84
SFSWAP-206ENST00000537582 KDM3BQ7LBC6 1761 aa20.3■□□□□ 0.84
SFSWAP-206ENST00000537582 ERVV-2B6SEH9 535 aa20.29■□□□□ 0.84
SFSWAP-206ENST00000537582 RXRBP28702 533 aa20.28■□□□□ 0.84
SFSWAP-206ENST00000537582 PRIM1P49642 420 aaKnown RBP20.28■□□□□ 0.84
SFSWAP-206ENST00000537582 PIGBQ92521 554 aa20.27■□□□□ 0.84
SFSWAP-206ENST00000537582 SYTL4Q96C24 671 aaPredicted RBP20.27■□□□□ 0.84
SFSWAP-206ENST00000537582 RCAN3Q9UKA8 241 aa20.27■□□□□ 0.84
SFSWAP-206ENST00000537582 BRWD3Q6RI45 1802 aa20.26■□□□□ 0.83
SFSWAP-206ENST00000537582 BABAM1Q9NWV8 329 aa20.26■□□□□ 0.83
SFSWAP-206ENST00000537582 TMOD3Q9NYL9 352 aa20.26■□□□□ 0.83
SFSWAP-206ENST00000537582 RGS12O14924 1447 aa20.26■□□□□ 0.83
SFSWAP-206ENST00000537582 ITGB4P16144 1822 aa20.26■□□□□ 0.83
SFSWAP-206ENST00000537582 KCNQ2O43526 872 aa20.25■□□□□ 0.83
SFSWAP-206ENST00000537582 EIF4A1P60842 406 aaKnown RBP20.25■□□□□ 0.83
SFSWAP-206ENST00000537582 PTF1AQ7RTS3 328 aa20.25■□□□□ 0.83
SFSWAP-206ENST00000537582 TWISTNBQ3B726 338 aaPredicted RBP20.25■□□□□ 0.83
SFSWAP-206ENST00000537582 ZNF790Q6PG37 636 aa20.25■□□□□ 0.83
SFSWAP-206ENST00000537582 SUPT16HQ9Y5B9 1047 aaKnown RBP20.25■□□□□ 0.83
SFSWAP-206ENST00000537582 BCL9O00512 1426 aa20.24■□□□□ 0.83
SFSWAP-206ENST00000537582 VAMP4O75379 141 aa20.24■□□□□ 0.83
SFSWAP-206ENST00000537582 BCL2L13Q9BXK5 485 aa20.24■□□□□ 0.83
SFSWAP-206ENST00000537582 PAPPAQ13219 1627 aa20.24■□□□□ 0.83
SFSWAP-206ENST00000537582 TCERG1O14776 1098 aaKnown RBP20.23■□□□□ 0.83
SFSWAP-206ENST00000537582 ASAP1Q9ULH1 1129 aa20.23■□□□□ 0.83
SFSWAP-206ENST00000537582 PRAMEF22A3QJZ6 481 aa20.22■□□□□ 0.83
SFSWAP-206ENST00000537582 BCAR3O75815 825 aa20.22■□□□□ 0.83
SFSWAP-206ENST00000537582 KRT27Q7Z3Y8 459 aa20.22■□□□□ 0.83
SFSWAP-206ENST00000537582 ZNF496Q96IT1 587 aaPredicted RBP20.22■□□□□ 0.83
SFSWAP-206ENST00000537582 RARSP54136 660 aaKnown RBP20.21■□□□□ 0.83
SFSWAP-206ENST00000537582 ATG3Q9NT62 314 aa20.21■□□□□ 0.83
SFSWAP-206ENST00000537582 KCPQ6ZWJ8 1503 aa20.2■□□□□ 0.82
SFSWAP-206ENST00000537582 HEG1Q9ULI3 1381 aa20.19■□□□□ 0.82
SFSWAP-206ENST00000537582 PTCD1O75127 700 aaKnown RBP20.19■□□□□ 0.82
SFSWAP-206ENST00000537582 TTC5Q8N0Z6 440 aa20.19■□□□□ 0.82
SFSWAP-206ENST00000537582 SSH1Q8WYL5 1049 aa20.19■□□□□ 0.82
SFSWAP-206ENST00000537582 NECTIN2Q92692 538 aa20.19■□□□□ 0.82
SFSWAP-206ENST00000537582 UBR2Q8IWV8 1755 aa20.18■□□□□ 0.82
SFSWAP-206ENST00000537582 KAT6BQ8WYB5 2073 aa20.18■□□□□ 0.82
SFSWAP-206ENST00000537582 C5P01031 1676 aa20.17■□□□□ 0.82
SFSWAP-206ENST00000537582 CT47B1P0C2W7 299 aaPredicted RBP20.17■□□□□ 0.82
SFSWAP-206ENST00000537582 EP400Q96L91 3159 aa20.17■□□□□ 0.82
SFSWAP-206ENST00000537582 PLIN1O60240 522 aa20.17■□□□□ 0.82
SFSWAP-206ENST00000537582 GIGYF1O75420 1035 aaPredicted RBP20.17■□□□□ 0.82
SFSWAP-206ENST00000537582 NHSQ6T4R5 1651 aa20.16■□□□□ 0.82
SFSWAP-206ENST00000537582 FMNL2Q96PY5 1086 aa20.16■□□□□ 0.82
SFSWAP-206ENST00000537582 SMC4Q9NTJ3 1288 aa20.15■□□□□ 0.82
SFSWAP-206ENST00000537582 EIF2S2P20042 333 aaKnown RBP20.14■□□□□ 0.81
SFSWAP-206ENST00000537582 SLC4A9Q96Q91 983 aa20.14■□□□□ 0.81
SFSWAP-206ENST00000537582 SBF2Q86WG5 1849 aa20.14■□□□□ 0.81
SFSWAP-206ENST00000537582 RNF123Q5XPI4 1314 aa20.14■□□□□ 0.81
SFSWAP-206ENST00000537582 RRP1P56182 461 aaKnown RBP20.13■□□□□ 0.81
SFSWAP-206ENST00000537582 RBM42Q9BTD8 480 aaKnown RBP20.13■□□□□ 0.81
SFSWAP-206ENST00000537582 IRX6P78412 446 aaPredicted RBP20.12■□□□□ 0.81
SFSWAP-206ENST00000537582 HDGFL1Q5TGJ6 251 aa20.12■□□□□ 0.81
SFSWAP-206ENST00000537582 MRPL50Q8N5N7 158 aaKnown RBP20.12■□□□□ 0.81
SFSWAP-206ENST00000537582 USP16Q9Y5T5 823 aa20.12■□□□□ 0.81
SFSWAP-206ENST00000537582 BTAF1O14981 1849 aa20.12■□□□□ 0.81
SFSWAP-206ENST00000537582 FAM196AQ6ZSG2 479 aa20.12■□□□□ 0.81
SFSWAP-206ENST00000537582 TNNQ9UQP3 1299 aa20.12■□□□□ 0.81
SFSWAP-206ENST00000537582 PALLDQ8WX93 1383 aa20.11■□□□□ 0.81
SFSWAP-206ENST00000537582 SNRPA1P09661 255 aaKnown RBP20.11■□□□□ 0.81
SFSWAP-206ENST00000537582 ALDH1L2Q3SY69 923 aa20.11■□□□□ 0.81
SFSWAP-206ENST00000537582 FRAT1Q92837 279 aaPredicted RBP20.11■□□□□ 0.81
SFSWAP-206ENST00000537582 TRIM37O94972 964 aa20.1■□□□□ 0.81
SFSWAP-206ENST00000537582 ANXA1P04083 346 aa20.1■□□□□ 0.81
SFSWAP-206ENST00000537582 HOXB7P09629 217 aa20.1■□□□□ 0.81
SFSWAP-206ENST00000537582 PIP4K2AP48426 406 aaPredicted RBP20.09■□□□□ 0.81
SFSWAP-206ENST00000537582 ZNF428Q96B54 188 aa20.09■□□□□ 0.81
SFSWAP-206ENST00000537582 CHPF2Q9P2E5 772 aa20.09■□□□□ 0.81
SFSWAP-206ENST00000537582 PROSER3Q2NL68 480 aa20.08■□□□□ 0.81
SFSWAP-206ENST00000537582 C20orf194Q5TEA3 1177 aa20.08■□□□□ 0.81
SFSWAP-206ENST00000537582 CCDC30Q5VVM6 783 aa20.08■□□□□ 0.81
SFSWAP-206ENST00000537582 G2E3Q7L622 706 aa20.08■□□□□ 0.81
SFSWAP-206ENST00000537582 DNAJC10Q8IXB1 793 aa20.08■□□□□ 0.81
SFSWAP-206ENST00000537582 NOB1Q9ULX3 412 aaKnown RBP20.08■□□□□ 0.81
SFSWAP-206ENST00000537582 SOS1Q07889 1333 aaPredicted RBP20.08■□□□□ 0.81
SFSWAP-206ENST00000537582 SLC4A2P04920 1241 aa20.08■□□□□ 0.8
SFSWAP-206ENST00000537582 KCNQ4P56696 695 aa20.08■□□□□ 0.8
SFSWAP-206ENST00000537582 BCL11BQ9C0K0 894 aaPredicted RBP20.08■□□□□ 0.8
SFSWAP-206ENST00000537582 LAMB4A4D0S4 1761 aa20.07■□□□□ 0.8
SFSWAP-206ENST00000537582 TJP1Q07157 1748 aa20.06■□□□□ 0.8
SFSWAP-206ENST00000537582 LOC102724428A0A0B4J2F2 783 aa20.06■□□□□ 0.8
SFSWAP-206ENST00000537582 SIK1P57059 783 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 193.1 ms