RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 NUCB2P80303 420 aa17.59■□□□□ 0.41
USP44-203ENST00000537435 GNAI3P08754 354 aa17.58■□□□□ 0.41
USP44-203ENST00000537435 TSHZ3Q63HK5 1081 aa17.58■□□□□ 0.41
USP44-203ENST00000537435 LRRCC1Q9C099 1032 aa17.58■□□□□ 0.4
USP44-203ENST00000537435 RGPD8O14715 1765 aaPredicted RBP17.58■□□□□ 0.4
USP44-203ENST00000537435 SALL3Q9BXA9 1300 aa17.57■□□□□ 0.4
USP44-203ENST00000537435 PNMA6EA0A0J9YXQ4 647 aa17.57■□□□□ 0.4
USP44-203ENST00000537435 CYP2E1P05181 493 aaPredicted RBP17.57■□□□□ 0.4
USP44-203ENST00000537435 IL17REQ8NFR9 667 aa17.57■□□□□ 0.4
USP44-203ENST00000537435 ATP8B2P98198 1209 aa17.57■□□□□ 0.4
USP44-203ENST00000537435 LTV1Q96GA3 475 aaPredicted RBP17.57■□□□□ 0.4
USP44-203ENST00000537435 CWC22Q9HCG8 908 aaKnown RBP17.57■□□□□ 0.4
USP44-203ENST00000537435 DDX49Q9Y6V7 483 aaKnown RBP17.57■□□□□ 0.4
USP44-203ENST00000537435 PKP1Q13835 747 aa17.56■□□□□ 0.4
USP44-203ENST00000537435 KLHL40Q2TBA0 621 aa17.56■□□□□ 0.4
USP44-203ENST00000537435 MAP3K5Q99683 1374 aa17.56■□□□□ 0.4
USP44-203ENST00000537435 LRRC37A3O60309 1634 aa17.56■□□□□ 0.4
USP44-203ENST00000537435 MCTP1Q6DN14 999 aa17.56■□□□□ 0.4
USP44-203ENST00000537435 ZGPATQ8N5A5 531 aaKnown RBP17.56■□□□□ 0.4
USP44-203ENST00000537435 THEMISQ8N1K5 641 aaPredicted RBP17.55■□□□□ 0.4
USP44-203ENST00000537435 MX1P20591 662 aa17.55■□□□□ 0.4
USP44-203ENST00000537435 TAF7Q15545 349 aaPredicted RBP17.55■□□□□ 0.4
USP44-203ENST00000537435 ABTB2Q8N961 1025 aa17.55■□□□□ 0.4
USP44-203ENST00000537435 ANKARQ7Z5J8 1434 aa17.54■□□□□ 0.4
USP44-203ENST00000537435 KCNA6P17658 529 aa17.54■□□□□ 0.4
USP44-203ENST00000537435 LRRFIP2Q9Y608 721 aaKnown RBP17.54■□□□□ 0.4
USP44-203ENST00000537435 NWD1Q149M9 1564 aa17.54■□□□□ 0.4
USP44-203ENST00000537435 IBTKQ9P2D0 1353 aaPredicted RBP17.54■□□□□ 0.4
USP44-203ENST00000537435 SOS1Q07889 1333 aaPredicted RBP17.53■□□□□ 0.4
USP44-203ENST00000537435 ESYT1Q9BSJ8 1104 aa17.53■□□□□ 0.4
USP44-203ENST00000537435 FAM208AQ9UK61 1670 aaKnown RBP17.53■□□□□ 0.4
USP44-203ENST00000537435 BABAM1Q9NWV8 329 aa17.53■□□□□ 0.4
USP44-203ENST00000537435 AK9Q5TCS8 1911 aa17.52■□□□□ 0.4
USP44-203ENST00000537435 USHBP1Q8N6Y0 703 aa17.52■□□□□ 0.4
USP44-203ENST00000537435 RILPL2Q969X0 211 aa17.52■□□□□ 0.4
USP44-203ENST00000537435 TRIM6-TRIM34B2RNG4 842 aa17.52■□□□□ 0.39
USP44-203ENST00000537435 XRN1Q8IZH2 1706 aaKnown RBP17.52■□□□□ 0.39
USP44-203ENST00000537435 USP44Q9H0E7 712 aa17.52■□□□□ 0.39
USP44-203ENST00000537435 CLCN1P35523 988 aa17.51■□□□□ 0.39
USP44-203ENST00000537435 NEK4P51957 841 aa17.51■□□□□ 0.39
USP44-203ENST00000537435 HDGFL1Q5TGJ6 251 aa17.51■□□□□ 0.39
USP44-203ENST00000537435 C14orf37Q86TY3 774 aa17.51■□□□□ 0.39
USP44-203ENST00000537435 LMBRD1Q9NUN5 540 aa17.51■□□□□ 0.39
USP44-203ENST00000537435 UBTFL1P0CB47 393 aaPredicted RBP17.5■□□□□ 0.39
USP44-203ENST00000537435 CHMLP26374 656 aa17.5■□□□□ 0.39
USP44-203ENST00000537435 PHAXQ9H814 394 aaKnown RBP17.5■□□□□ 0.39
USP44-203ENST00000537435 STAP2Q9UGK3 403 aa17.5■□□□□ 0.39
USP44-203ENST00000537435 ZDHHC9Q9Y397 364 aa17.5■□□□□ 0.39
USP44-203ENST00000537435 SRCIN1Q9C0H9 1055 aa17.49■□□□□ 0.39
USP44-203ENST00000537435 PXDNLA1KZ92 1463 aa17.49■□□□□ 0.39
USP44-203ENST00000537435 MCCP23508 829 aa17.49■□□□□ 0.39
USP44-203ENST00000537435 ANO2Q9NQ90 1003 aa17.49■□□□□ 0.39
USP44-203ENST00000537435 NCLP19338 710 aaKnown RBP17.48■□□□□ 0.39
USP44-203ENST00000537435 TRIM44Q96DX7 344 aaPredicted RBP17.48■□□□□ 0.39
USP44-203ENST00000537435 TMX3Q96JJ7 454 aa17.48■□□□□ 0.39
USP44-203ENST00000537435 MARF1Q9Y4F3 1742 aaKnown RBP17.48■□□□□ 0.39
USP44-203ENST00000537435 CAVIN1Q6NZI2 390 aaKnown RBP17.48■□□□□ 0.39
USP44-203ENST00000537435 UNC5CLQ8IV45 518 aa17.48■□□□□ 0.39
USP44-203ENST00000537435 IL1RAPL2Q9NP60 686 aa17.48■□□□□ 0.39
USP44-203ENST00000537435 PALD1Q9ULE6 856 aa17.48■□□□□ 0.39
USP44-203ENST00000537435 ESPNB1AK53 854 aa17.47■□□□□ 0.39
USP44-203ENST00000537435 NASPP49321 788 aaPredicted RBP17.47■□□□□ 0.39
USP44-203ENST00000537435 SSH3Q8TE77 659 aa17.47■□□□□ 0.39
USP44-203ENST00000537435 EIF2S2P20042 333 aaKnown RBP17.46■□□□□ 0.39
USP44-203ENST00000537435 MCM2P49736 904 aa17.46■□□□□ 0.39
USP44-203ENST00000537435 ERBB4Q15303 1308 aa17.46■□□□□ 0.39
USP44-203ENST00000537435 PRPF40AO75400 957 aaKnown RBP17.46■□□□□ 0.39
USP44-203ENST00000537435 ZNF445P59923 1031 aa17.46■□□□□ 0.39
USP44-203ENST00000537435 ANAPC15P60006 121 aa17.46■□□□□ 0.39
USP44-203ENST00000537435 PPP1R42Q7Z4L9 355 aa17.45■□□□□ 0.38
USP44-203ENST00000537435 PHF8Q9UPP1 1060 aa17.45■□□□□ 0.38
USP44-203ENST00000537435 CEMIPQ8WUJ3 1361 aa17.45■□□□□ 0.38
USP44-203ENST00000537435 AOX1Q06278 1338 aa17.45■□□□□ 0.38
USP44-203ENST00000537435 ZSCAN23Q3MJ62 389 aa17.45■□□□□ 0.38
USP44-203ENST00000537435 NUTM1Q86Y26 1132 aa17.45■□□□□ 0.38
USP44-203ENST00000537435 TUBGCP6Q96RT7 1819 aa17.45■□□□□ 0.38
USP44-203ENST00000537435 USP54Q70EL1 1684 aa17.45■□□□□ 0.38
USP44-203ENST00000537435 SURF6O75683 361 aaKnown RBP17.44■□□□□ 0.38
USP44-203ENST00000537435 IP6K1Q92551 441 aa17.44■□□□□ 0.38
USP44-203ENST00000537435 EIF4A1P60842 406 aaKnown RBP17.44■□□□□ 0.38
USP44-203ENST00000537435 CCDC173Q0VFZ6 552 aa17.44■□□□□ 0.38
USP44-203ENST00000537435 NBPF6Q5VWK0 638 aa17.44■□□□□ 0.38
USP44-203ENST00000537435 CHAMP1Q96JM3 812 aa17.44■□□□□ 0.38
USP44-203ENST00000537435 NBPF4Q96M43 638 aa17.44■□□□□ 0.38
USP44-203ENST00000537435 LGR6Q9HBX8 967 aa17.44■□□□□ 0.38
USP44-203ENST00000537435 CACNA1FO60840 1977 aa17.44■□□□□ 0.38
USP44-203ENST00000537435 RAB11FIP3O75154 756 aa17.43■□□□□ 0.38
USP44-203ENST00000537435 CUL4AQ13619 759 aa17.43■□□□□ 0.38
USP44-203ENST00000537435 POLA2Q14181 598 aa17.43■□□□□ 0.38
USP44-203ENST00000537435 FOXD4L5Q5VV16 416 aaPredicted RBP17.43■□□□□ 0.38
USP44-203ENST00000537435 NOL8Q76FK4 1167 aaKnown RBP17.43■□□□□ 0.38
USP44-203ENST00000537435 GPT2Q8TD30 523 aa17.43■□□□□ 0.38
USP44-203ENST00000537435 FOXD4L4Q8WXT5 416 aaPredicted RBP17.43■□□□□ 0.38
USP44-203ENST00000537435 IL25Q9H293 177 aa17.43■□□□□ 0.38
USP44-203ENST00000537435 RHPN1Q8TCX5 695 aa17.42■□□□□ 0.38
USP44-203ENST00000537435 CHPF2Q9P2E5 772 aa17.42■□□□□ 0.38
USP44-203ENST00000537435 N4BP2Q86UW6 1770 aaPredicted RBP17.42■□□□□ 0.38
USP44-203ENST00000537435 ANP32BQ92688 251 aaKnown RBP17.42■□□□□ 0.38
USP44-203ENST00000537435 PPP1R9BQ96SB3 815 aa17.42■□□□□ 0.38
USP44-203ENST00000537435 FER1L4A9Z1Z3 1794 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms