RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 PIGBQ92521 554 aa13.42□□□□□ -0.26
CCDC170-202ENST00000537358 PLEKHO1Q53GL0 409 aaPredicted RBP13.41□□□□□ -0.26
CCDC170-202ENST00000537358 IGSF1Q8N6C5 1336 aa13.4□□□□□ -0.26
CCDC170-202ENST00000537358 LOC102724428A0A0B4J2F2 783 aa13.4□□□□□ -0.26
CCDC170-202ENST00000537358 SIK1P57059 783 aa13.4□□□□□ -0.26
CCDC170-202ENST00000537358 AMOTQ4VCS5 1084 aa13.4□□□□□ -0.26
CCDC170-202ENST00000537358 MSL1Q68DK7 614 aa13.4□□□□□ -0.26
CCDC170-202ENST00000537358 UBR3Q6ZT12 1888 aa13.39□□□□□ -0.27
CCDC170-202ENST00000537358 ERVV-2B6SEH9 535 aa13.38□□□□□ -0.27
CCDC170-202ENST00000537358 PHF14O94880 888 aa13.38□□□□□ -0.27
CCDC170-202ENST00000537358 SSFA2P28290 1259 aa13.38□□□□□ -0.27
CCDC170-202ENST00000537358 ATP6V1AP38606 617 aa13.38□□□□□ -0.27
CCDC170-202ENST00000537358 C1orf141Q5JVX7 400 aa13.38□□□□□ -0.27
CCDC170-202ENST00000537358 ZNF530Q6P9A1 599 aaPredicted RBP13.38□□□□□ -0.27
CCDC170-202ENST00000537358 DCAF5Q96JK2 942 aa13.38□□□□□ -0.27
CCDC170-202ENST00000537358 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.37□□□□□ -0.27
CCDC170-202ENST00000537358 GRIN3BO60391 1043 aa13.37□□□□□ -0.27
CCDC170-202ENST00000537358 ZNF784Q8NCA9 323 aaPredicted RBP13.37□□□□□ -0.27
CCDC170-202ENST00000537358 ASAP1Q9ULH1 1129 aa13.37□□□□□ -0.27
CCDC170-202ENST00000537358 CD2APQ9Y5K6 639 aa13.37□□□□□ -0.27
CCDC170-202ENST00000537358 UTRNP46939 3433 aa13.36□□□□□ -0.27
CCDC170-202ENST00000537358 GNPATO15228 680 aa13.36□□□□□ -0.27
CCDC170-202ENST00000537358 CABP4P57796 275 aa13.36□□□□□ -0.27
CCDC170-202ENST00000537358 NLGN2Q8NFZ4 835 aa13.36□□□□□ -0.27
CCDC170-202ENST00000537358 MTHFSP49914 203 aa13.35□□□□□ -0.27
CCDC170-202ENST00000537358 LINC00116Q8NCU8 138 aa13.35□□□□□ -0.27
CCDC170-202ENST00000537358 RBM42Q9BTD8 480 aaKnown RBP13.35□□□□□ -0.27
CCDC170-202ENST00000537358 ATG3Q9NT62 314 aa13.35□□□□□ -0.27
CCDC170-202ENST00000537358 SULT6B1Q6IMI4 303 aa13.34□□□□□ -0.27
CCDC170-202ENST00000537358 RTCBQ9Y3I0 505 aaKnown RBP13.34□□□□□ -0.27
CCDC170-202ENST00000537358 KIF7Q2M1P5 1343 aa13.34□□□□□ -0.27
CCDC170-202ENST00000537358 ZNF831Q5JPB2 1677 aa13.34□□□□□ -0.27
CCDC170-202ENST00000537358 ITPK1Q13572 414 aa13.32□□□□□ -0.28
CCDC170-202ENST00000537358 AMER1Q5JTC6 1135 aaPredicted RBP13.32□□□□□ -0.28
CCDC170-202ENST00000537358 TRAPPC3LQ5T215 181 aa13.32□□□□□ -0.28
CCDC170-202ENST00000537358 AEBP1Q8IUX7 1158 aa13.31□□□□□ -0.28
CCDC170-202ENST00000537358 ZNF219Q9P2Y4 722 aaPredicted RBP13.31□□□□□ -0.28
CCDC170-202ENST00000537358 KDRP35968 1356 aa13.31□□□□□ -0.28
CCDC170-202ENST00000537358 KDM6AO15550 1401 aaPredicted RBP13.3□□□□□ -0.28
CCDC170-202ENST00000537358 SCN11AQ9UI33 1791 aa13.3□□□□□ -0.28
CCDC170-202ENST00000537358 IL13P35225 146 aa13.3□□□□□ -0.28
CCDC170-202ENST00000537358 RC3H1Q5TC82 1133 aaKnown RBP13.3□□□□□ -0.28
CCDC170-202ENST00000537358 COL5A3P25940 1745 aaPredicted RBP13.3□□□□□ -0.28
CCDC170-202ENST00000537358 GOLGB1Q14789 3259 aaKnown RBP13.3□□□□□ -0.28
CCDC170-202ENST00000537358 YBX3P16989 372 aaKnown RBP eCLIP13.29□□□□□ -0.28
CCDC170-202ENST00000537358 RFC4P35249 363 aa13.29□□□□□ -0.28
CCDC170-202ENST00000537358 AKAP4Q5JQC9 854 aa13.29□□□□□ -0.28
CCDC170-202ENST00000537358 CC2D1BQ5T0F9 858 aaKnown RBP13.29□□□□□ -0.28
CCDC170-202ENST00000537358 SMIM5Q71RC9 77 aa13.29□□□□□ -0.28
CCDC170-202ENST00000537358 AMIGO3Q86WK7 504 aa13.29□□□□□ -0.28
CCDC170-202ENST00000537358 NLGN1Q8N2Q7 840 aa13.29□□□□□ -0.28
CCDC170-202ENST00000537358 CNTNAP4Q9C0A0 1308 aa13.29□□□□□ -0.28
CCDC170-202ENST00000537358 DIAPH1O60610 1272 aaKnown RBP13.28□□□□□ -0.28
CCDC170-202ENST00000537358 PTCD1O75127 700 aaKnown RBP13.28□□□□□ -0.28
CCDC170-202ENST00000537358 NFATC2IPQ8NCF5 419 aa13.28□□□□□ -0.28
CCDC170-202ENST00000537358 VIRMAQ69YN4 1812 aaKnown RBP13.27□□□□□ -0.28
CCDC170-202ENST00000537358 GIGYF1O75420 1035 aaPredicted RBP13.27□□□□□ -0.29
CCDC170-202ENST00000537358 RPS6KA4O75676 772 aa13.27□□□□□ -0.29
CCDC170-202ENST00000537358 MMP10P09238 476 aa13.27□□□□□ -0.29
CCDC170-202ENST00000537358 HMOX1P09601 288 aa13.26□□□□□ -0.29
CCDC170-202ENST00000537358 CCDC87Q9NVE4 849 aa13.26□□□□□ -0.29
CCDC170-202ENST00000537358 PARP3Q9Y6F1 533 aa13.26□□□□□ -0.29
CCDC170-202ENST00000537358 PER1O15534 1290 aaPredicted RBP13.25□□□□□ -0.29
CCDC170-202ENST00000537358 C1QTNF8P60827 252 aa13.25□□□□□ -0.29
CCDC170-202ENST00000537358 CACNB1Q02641 598 aaPredicted RBP13.25□□□□□ -0.29
CCDC170-202ENST00000537358 ARHGEF1Q92888 912 aaKnown RBP13.25□□□□□ -0.29
CCDC170-202ENST00000537358 SLC4A9Q96Q91 983 aa13.25□□□□□ -0.29
CCDC170-202ENST00000537358 SLC52A2Q9HAB3 445 aa13.25□□□□□ -0.29
CCDC170-202ENST00000537358 MYH14Q7Z406 1995 aaKnown RBP13.25□□□□□ -0.29
CCDC170-202ENST00000537358 CICQ96RK0 1608 aaPredicted RBP13.24□□□□□ -0.29
CCDC170-202ENST00000537358 NPC1L1Q9UHC9 1359 aa13.24□□□□□ -0.29
CCDC170-202ENST00000537358 CRKLP46109 303 aaKnown RBP13.24□□□□□ -0.29
CCDC170-202ENST00000537358 CNGB1Q14028 1251 aaPredicted RBP13.24□□□□□ -0.29
CCDC170-202ENST00000537358 SPINK5Q9NQ38 1064 aaPredicted RBP13.24□□□□□ -0.29
CCDC170-202ENST00000537358 C4AP0C0L4 1744 aa13.24□□□□□ -0.29
CCDC170-202ENST00000537358 KIF13BQ9NQT8 1826 aa13.23□□□□□ -0.29
CCDC170-202ENST00000537358 CAPN15O75808 1086 aa13.23□□□□□ -0.29
CCDC170-202ENST00000537358 TGFB2P61812 414 aa13.23□□□□□ -0.29
CCDC170-202ENST00000537358 TJP1Q07157 1748 aa13.22□□□□□ -0.29
CCDC170-202ENST00000537358 SENP3-EIF4A1A0A087X0R7 540 aa13.22□□□□□ -0.29
CCDC170-202ENST00000537358 U2SURPO15042 1029 aaKnown RBP13.22□□□□□ -0.29
CCDC170-202ENST00000537358 RNMTO43148 476 aaKnown RBP13.22□□□□□ -0.29
CCDC170-202ENST00000537358 GYS1P13807 737 aa13.22□□□□□ -0.29
CCDC170-202ENST00000537358 CFAP53Q96M91 514 aa13.22□□□□□ -0.29
CCDC170-202ENST00000537358 WWC3Q9ULE0 1092 aa13.22□□□□□ -0.29
CCDC170-202ENST00000537358 ZPR1O75312 459 aa13.21□□□□□ -0.29
CCDC170-202ENST00000537358 TTC5Q8N0Z6 440 aa13.21□□□□□ -0.29
CCDC170-202ENST00000537358 LGR6Q9HBX8 967 aa13.21□□□□□ -0.29
CCDC170-202ENST00000537358 GPBP1L1Q9HC44 474 aaPredicted RBP13.21□□□□□ -0.29
CCDC170-202ENST00000537358 N4BP2Q86UW6 1770 aaPredicted RBP13.21□□□□□ -0.29
CCDC170-202ENST00000537358 MRC1P22897 1456 aa13.21□□□□□ -0.3
CCDC170-202ENST00000537358 ATP10DQ9P241 1426 aa13.21□□□□□ -0.3
CCDC170-202ENST00000537358 MTHFSDQ2M296 383 aaKnown RBP13.2□□□□□ -0.3
CCDC170-202ENST00000537358 GAS2L2Q8NHY3 880 aa13.2□□□□□ -0.3
CCDC170-202ENST00000537358 C10orf71Q711Q0 1435 aa13.2□□□□□ -0.3
CCDC170-202ENST00000537358 USP42Q9H9J4 1324 aaKnown RBP13.19□□□□□ -0.3
CCDC170-202ENST00000537358 PXDNLA1KZ92 1463 aa13.19□□□□□ -0.3
CCDC170-202ENST00000537358 TEFQ10587 303 aa13.19□□□□□ -0.3
CCDC170-202ENST00000537358 DNAJC10Q8IXB1 793 aa13.19□□□□□ -0.3
CCDC170-202ENST00000537358 NUDCQ9Y266 331 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms