RNA–Protein interactions for RNA: ENST00000537335.5

POLR1B-216, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 4,961 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-216ENST00000537335 CHMP7Q8WUX9 453 aaPredicted RBP13.73□□□□□ -0.21
POLR1B-216ENST00000537335 MIPOL1Q8TD10 442 aa13.72□□□□□ -0.21
POLR1B-216ENST00000537335 NSRP1Q9H0G5 558 aaKnown RBP13.72□□□□□ -0.21
POLR1B-216ENST00000537335 GNAI3P08754 354 aa13.72□□□□□ -0.21
POLR1B-216ENST00000537335 STX1AQ16623 288 aa13.72□□□□□ -0.21
POLR1B-216ENST00000537335 FEZ2Q9UHY8 353 aaPredicted RBP13.72□□□□□ -0.21
POLR1B-216ENST00000537335 RIOK3O14730 519 aaKnown RBP13.72□□□□□ -0.21
POLR1B-216ENST00000537335 PHACTR2O75167 634 aa13.72□□□□□ -0.21
POLR1B-216ENST00000537335 FAM184BQ9ULE4 1060 aa13.72□□□□□ -0.21
POLR1B-216ENST00000537335 ZBTB12Q9Y330 459 aaPredicted RBP13.72□□□□□ -0.21
POLR1B-216ENST00000537335 DIAPH1O60610 1272 aaKnown RBP13.72□□□□□ -0.21
POLR1B-216ENST00000537335 ZSCAN26Q16670 478 aa13.72□□□□□ -0.21
POLR1B-216ENST00000537335 BLOC1S2Q6QNY1 142 aa13.72□□□□□ -0.21
POLR1B-216ENST00000537335 TCP11L2Q8N4U5 519 aa13.72□□□□□ -0.21
POLR1B-216ENST00000537335 KIF4AO95239 1232 aa13.71□□□□□ -0.21
POLR1B-216ENST00000537335 GDPD2Q9HCC8 539 aa13.71□□□□□ -0.21
POLR1B-216ENST00000537335 MKRN1Q9UHC7 482 aaKnown RBP13.71□□□□□ -0.21
POLR1B-216ENST00000537335 USO1O60763 962 aaKnown RBP13.71□□□□□ -0.21
POLR1B-216ENST00000537335 LMNTD2Q8IXW0 634 aa13.71□□□□□ -0.21
POLR1B-216ENST00000537335 FAM200AQ8TCP9 573 aa13.71□□□□□ -0.21
POLR1B-216ENST00000537335 C1orf115Q9H7X2 142 aa13.71□□□□□ -0.21
POLR1B-216ENST00000537335 CECR2Q9BXF3 1484 aa13.71□□□□□ -0.21
POLR1B-216ENST00000537335 CCDC172P0C7W6 258 aa13.71□□□□□ -0.21
POLR1B-216ENST00000537335 CCDC18Q5T9S5 1454 aa13.71□□□□□ -0.22
POLR1B-216ENST00000537335 UBE4AQ14139 1066 aa13.71□□□□□ -0.22
POLR1B-216ENST00000537335 SPATS2LQ9NUQ6 558 aaKnown RBP13.71□□□□□ -0.22
POLR1B-216ENST00000537335 UBTFL1P0CB47 393 aaPredicted RBP13.7□□□□□ -0.22
POLR1B-216ENST00000537335 HDXQ7Z353 690 aa13.7□□□□□ -0.22
POLR1B-216ENST00000537335 CKAP4Q07065 602 aaKnown RBP13.7□□□□□ -0.22
POLR1B-216ENST00000537335 ARFGAP2Q8N6H7 521 aa13.7□□□□□ -0.22
POLR1B-216ENST00000537335 ATF7IPQ6VMQ6 1270 aa13.7□□□□□ -0.22
POLR1B-216ENST00000537335 FAM76AQ8TAV0 307 aa13.7□□□□□ -0.22
POLR1B-216ENST00000537335 SURF6O75683 361 aaKnown RBP13.7□□□□□ -0.22
POLR1B-216ENST00000537335 EXOSC9Q06265 439 aaKnown RBP13.7□□□□□ -0.22
POLR1B-216ENST00000537335 PIBF1Q8WXW3 757 aa13.7□□□□□ -0.22
POLR1B-216ENST00000537335 LUC7L2Q9Y383 392 aaKnown RBP13.7□□□□□ -0.22
POLR1B-216ENST00000537335 TCHPQ9BT92 498 aa13.69□□□□□ -0.22
POLR1B-216ENST00000537335 TANGO6Q9C0B7 1094 aa13.69□□□□□ -0.22
POLR1B-216ENST00000537335 CFAP57Q96MR6 1250 aa13.69□□□□□ -0.22
POLR1B-216ENST00000537335 JAKMIP1Q96N16 626 aaKnown RBP13.69□□□□□ -0.22
POLR1B-216ENST00000537335 NOB1Q9ULX3 412 aaKnown RBP13.69□□□□□ -0.22
POLR1B-216ENST00000537335 TMX4Q9H1E5 349 aaPredicted RBP13.69□□□□□ -0.22
POLR1B-216ENST00000537335 SSBP05455 408 aaKnown RBP eCLIP13.68□□□□□ -0.22
POLR1B-216ENST00000537335 DDX46Q7L014 1031 aaKnown RBP13.68□□□□□ -0.22
POLR1B-216ENST00000537335 CTCFLQ8NI51 663 aaPredicted RBP13.68□□□□□ -0.22
POLR1B-216ENST00000537335 GOPCQ9HD26 462 aa13.68□□□□□ -0.22
POLR1B-216ENST00000537335 ZEB2O60315 1214 aa13.68□□□□□ -0.22
POLR1B-216ENST00000537335 STAMBPO95630 424 aa13.68□□□□□ -0.22
POLR1B-216ENST00000537335 GIMAP6Q6P9H5 292 aa13.68□□□□□ -0.22
POLR1B-216ENST00000537335 SRCIN1Q9C0H9 1055 aa13.68□□□□□ -0.22
POLR1B-216ENST00000537335 YEATS4O95619 227 aa13.68□□□□□ -0.22
POLR1B-216ENST00000537335 LACTBP83111 547 aaPredicted RBP13.68□□□□□ -0.22
POLR1B-216ENST00000537335 BCL2L12Q9HB09 334 aa13.68□□□□□ -0.22
POLR1B-216ENST00000537335 MX1P20591 662 aa13.67□□□□□ -0.22
POLR1B-216ENST00000537335 ARHGAP25P42331 645 aa13.67□□□□□ -0.22
POLR1B-216ENST00000537335 PCK1P35558 622 aa13.67□□□□□ -0.22
POLR1B-216ENST00000537335 PPP2R5AQ15172 486 aa13.67□□□□□ -0.22
POLR1B-216ENST00000537335 WASHC4Q2M389 1173 aa13.67□□□□□ -0.22
POLR1B-216ENST00000537335 EHBP1Q8NDI1 1231 aa13.67□□□□□ -0.22
POLR1B-216ENST00000537335 A6NNZ2 444 aa13.66□□□□□ -0.22
POLR1B-216ENST00000537335 BUB1BO60566 1050 aaPredicted RBP13.66□□□□□ -0.22
POLR1B-216ENST00000537335 WHAMMP3Q1A5X7 153 aa13.66□□□□□ -0.22
POLR1B-216ENST00000537335 TUBB8Q3ZCM7 444 aa13.66□□□□□ -0.22
POLR1B-216ENST00000537335 PPFIBP2Q8ND30 876 aa13.66□□□□□ -0.22
POLR1B-216ENST00000537335 AFAP1L1Q8TED9 768 aa13.66□□□□□ -0.22
POLR1B-216ENST00000537335 SH2B1Q9NRF2 756 aaPredicted RBP13.66□□□□□ -0.22
POLR1B-216ENST00000537335 CARMIL1Q5VZK9 1371 aa13.66□□□□□ -0.22
POLR1B-216ENST00000537335 PIP4K2BP78356 416 aa13.66□□□□□ -0.22
POLR1B-216ENST00000537335 SART3Q15020 963 aaKnown RBP13.66□□□□□ -0.22
POLR1B-216ENST00000537335 CPLX4Q7Z7G2 160 aa13.66□□□□□ -0.22
POLR1B-216ENST00000537335 CPLX3Q8WVH0 158 aa13.66□□□□□ -0.22
POLR1B-216ENST00000537335 RNF216Q9NWF9 866 aaPredicted RBP13.66□□□□□ -0.22
POLR1B-216ENST00000537335 DZIP1Q86YF9 867 aaKnown RBP13.66□□□□□ -0.22
POLR1B-216ENST00000537335 KDM4AO75164 1064 aa13.66□□□□□ -0.22
POLR1B-216ENST00000537335 PTGS1P23219 599 aa13.66□□□□□ -0.22
POLR1B-216ENST00000537335 CCDC178Q5BJE1 867 aa13.66□□□□□ -0.22
POLR1B-216ENST00000537335 MICAL1Q8TDZ2 1067 aa13.66□□□□□ -0.22
POLR1B-216ENST00000537335 ALS2CR12Q96Q35 445 aa13.66□□□□□ -0.22
POLR1B-216ENST00000537335 NDUFAB1O14561 156 aa13.65□□□□□ -0.22
POLR1B-216ENST00000537335 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.65□□□□□ -0.22
POLR1B-216ENST00000537335 C20orf194Q5TEA3 1177 aa13.65□□□□□ -0.22
POLR1B-216ENST00000537335 NAP1L3Q99457 506 aaPredicted RBP13.65□□□□□ -0.22
POLR1B-216ENST00000537335 CDK5RAP3Q96JB5 506 aa13.65□□□□□ -0.22
POLR1B-216ENST00000537335 NUP88Q99567 741 aaPredicted RBP13.65□□□□□ -0.22
POLR1B-216ENST00000537335 MROH2BQ7Z745 1585 aa13.65□□□□□ -0.22
POLR1B-216ENST00000537335 UACAQ9BZF9 1416 aa13.65□□□□□ -0.22
POLR1B-216ENST00000537335 PPP2R1AP30153 589 aa13.65□□□□□ -0.22
POLR1B-216ENST00000537335 GSTTP1A0A1W2PQM5 241 aa13.64□□□□□ -0.23
POLR1B-216ENST00000537335 EIF2S2P20042 333 aaKnown RBP13.64□□□□□ -0.23
POLR1B-216ENST00000537335 JADE2Q9NQC1 790 aa13.64□□□□□ -0.23
POLR1B-216ENST00000537335 STIM2Q9P246 746 aa13.64□□□□□ -0.23
POLR1B-216ENST00000537335 EVCP57679 992 aa13.64□□□□□ -0.23
POLR1B-216ENST00000537335 RAB3GAP1Q15042 981 aa13.64□□□□□ -0.23
POLR1B-216ENST00000537335 SYT10Q6XYQ8 523 aa13.64□□□□□ -0.23
POLR1B-216ENST00000537335 TAOK3Q9H2K8 898 aa13.64□□□□□ -0.23
POLR1B-216ENST00000537335 DHX29Q7Z478 1369 aaKnown RBP13.64□□□□□ -0.23
POLR1B-216ENST00000537335 ZNF500O60304 480 aaPredicted RBP13.64□□□□□ -0.23
POLR1B-216ENST00000537335 RLBP1P12271 317 aa13.64□□□□□ -0.23
POLR1B-216ENST00000537335 AMPHP49418 695 aa13.64□□□□□ -0.23
POLR1B-216ENST00000537335 KRT32Q14532 448 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms