RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 EVA1BQ9NVM1 165 aa6.64□□□□□ -1.35
SNHG1-203ENST00000537024 CNTLNQ9NXG0 1405 aa6.64□□□□□ -1.35
SNHG1-203ENST00000537024 PIK3CDO00329 1044 aa6.63□□□□□ -1.35
SNHG1-203ENST00000537024 SKIP12755 728 aa6.63□□□□□ -1.35
SNHG1-203ENST00000537024 PRR20EP86478 221 aa6.63□□□□□ -1.35
SNHG1-203ENST00000537024 PRR20CP86479 221 aa6.63□□□□□ -1.35
SNHG1-203ENST00000537024 PRR20DP86480 221 aa6.63□□□□□ -1.35
SNHG1-203ENST00000537024 PRR20BP86481 221 aa6.63□□□□□ -1.35
SNHG1-203ENST00000537024 PRR20AP86496 221 aa6.63□□□□□ -1.35
SNHG1-203ENST00000537024 KCNA1Q09470 495 aa6.63□□□□□ -1.35
SNHG1-203ENST00000537024 KCNH2Q12809 1159 aa6.63□□□□□ -1.35
SNHG1-203ENST00000537024 LCE2AQ5TA79 106 aaPredicted RBP6.63□□□□□ -1.35
SNHG1-203ENST00000537024 NBPF14Q5TI25 921 aa6.63□□□□□ -1.35
SNHG1-203ENST00000537024 SPRYD7Q5W111 196 aa6.63□□□□□ -1.35
SNHG1-203ENST00000537024 PDXDC2PQ6P474 469 aa6.63□□□□□ -1.35
SNHG1-203ENST00000537024 GPSM3Q9Y4H4 160 aa6.63□□□□□ -1.35
SNHG1-203ENST00000537024 STRCP1A6NGW2 1772 aa6.62□□□□□ -1.35
SNHG1-203ENST00000537024 ABCA6Q8N139 1617 aa6.62□□□□□ -1.35
SNHG1-203ENST00000537024 KDM5CP41229 1560 aa6.62□□□□□ -1.35
SNHG1-203ENST00000537024 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.62□□□□□ -1.35
SNHG1-203ENST00000537024 CARNS1A5YM72 827 aa6.62□□□□□ -1.35
SNHG1-203ENST00000537024 USP17L3A6NCW0 530 aa6.62□□□□□ -1.35
SNHG1-203ENST00000537024 USP17L4A6NCW7 530 aa6.62□□□□□ -1.35
SNHG1-203ENST00000537024 MMP16P51512 607 aa6.62□□□□□ -1.35
SNHG1-203ENST00000537024 MCCD1P59942 119 aaPredicted RBP6.62□□□□□ -1.35
SNHG1-203ENST00000537024 SLFNL1Q499Z3 407 aa6.62□□□□□ -1.35
SNHG1-203ENST00000537024 USP17L2Q6R6M4 530 aa6.62□□□□□ -1.35
SNHG1-203ENST00000537024 USP17L1Q7RTZ2 530 aa6.62□□□□□ -1.35
SNHG1-203ENST00000537024 ZNF598Q86UK7 904 aaKnown RBP6.62□□□□□ -1.35
SNHG1-203ENST00000537024 FAM160A2Q8N612 972 aaPredicted RBP6.62□□□□□ -1.35
SNHG1-203ENST00000537024 PCDHB9Q9Y5E1 797 aa6.62□□□□□ -1.35
SNHG1-203ENST00000537024 SCAPERQ9BY12 1400 aa6.61□□□□□ -1.35
SNHG1-203ENST00000537024 USP17L5A8MUK1 530 aa6.61□□□□□ -1.35
SNHG1-203ENST00000537024 TREML4Q6UXN2 200 aa6.61□□□□□ -1.35
SNHG1-203ENST00000537024 PRDM9Q9NQV7 894 aa6.61□□□□□ -1.35
SNHG1-203ENST00000537024 LRP5O75197 1615 aa6.61□□□□□ -1.35
SNHG1-203ENST00000537024 CDK12Q9NYV4 1490 aaPredicted RBP6.6□□□□□ -1.35
SNHG1-203ENST00000537024 KANK4Q5T7N3 995 aaPredicted RBP6.6□□□□□ -1.35
SNHG1-203ENST00000537024 LIAT1Q6ZQX7 453 aa6.6□□□□□ -1.35
SNHG1-203ENST00000537024 PLEKHM2Q8IWE5 1019 aa6.6□□□□□ -1.35
SNHG1-203ENST00000537024 CCDC24Q8N4L8 307 aa6.6□□□□□ -1.35
SNHG1-203ENST00000537024 CEP126Q9P2H0 1117 aa6.6□□□□□ -1.35
SNHG1-203ENST00000537024 DNMT1P26358 1616 aaKnown RBP6.59□□□□□ -1.35
SNHG1-203ENST00000537024 RAPGEF6Q8TEU7 1601 aa6.59□□□□□ -1.35
SNHG1-203ENST00000537024 TMEM88BA6NKF7 163 aa6.59□□□□□ -1.35
SNHG1-203ENST00000537024 GDF9O60383 454 aa6.59□□□□□ -1.35
SNHG1-203ENST00000537024 ADH1BP00325 375 aa6.59□□□□□ -1.35
SNHG1-203ENST00000537024 ELOAQ14241 798 aaKnown RBP6.59□□□□□ -1.35
SNHG1-203ENST00000537024 B4GALNT3Q6L9W6 998 aa6.59□□□□□ -1.35
SNHG1-203ENST00000537024 ZBTB33Q86T24 672 aa6.59□□□□□ -1.35
SNHG1-203ENST00000537024 RNF135Q8IUD6 432 aa6.59□□□□□ -1.35
SNHG1-203ENST00000537024 DEPDC4Q8N2C3 294 aa6.59□□□□□ -1.35
SNHG1-203ENST00000537024 ANKLE1Q8NAG6 615 aa6.59□□□□□ -1.35
SNHG1-203ENST00000537024 ARHGAP9Q9BRR9 750 aa6.59□□□□□ -1.35
SNHG1-203ENST00000537024 PPEF1O14829 653 aaPredicted RBP6.58□□□□□ -1.36
SNHG1-203ENST00000537024 TLL1O43897 1013 aa6.58□□□□□ -1.36
SNHG1-203ENST00000537024 MFAP1P55081 439 aaKnown RBP6.58□□□□□ -1.36
SNHG1-203ENST00000537024 FAM174AQ8TBP5 190 aa6.58□□□□□ -1.36
SNHG1-203ENST00000537024 ADAM32Q8TC27 787 aa6.58□□□□□ -1.36
SNHG1-203ENST00000537024 TRIM52Q96A61 297 aa6.58□□□□□ -1.36
SNHG1-203ENST00000537024 UNC93B1Q9H1C4 597 aa6.58□□□□□ -1.36
SNHG1-203ENST00000537024 NOVA2Q9UNW9 492 aaKnown RBP6.58□□□□□ -1.36
SNHG1-203ENST00000537024 CDK13Q14004 1512 aaKnown RBP6.58□□□□□ -1.36
SNHG1-203ENST00000537024 ZNF518AQ6AHZ1 1483 aa6.58□□□□□ -1.36
SNHG1-203ENST00000537024 FAM187AA6NFU0 413 aa6.57□□□□□ -1.36
SNHG1-203ENST00000537024 LZTS3O60299 673 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-203ENST00000537024 NCOA4Q13772 614 aa6.57□□□□□ -1.36
SNHG1-203ENST00000537024 ZNF697Q5TEC3 545 aa6.57□□□□□ -1.36
SNHG1-203ENST00000537024 LARP1Q6PKG0 1096 aaKnown RBP6.57□□□□□ -1.36
SNHG1-203ENST00000537024 PLPP7Q8NBV4 271 aa6.57□□□□□ -1.36
SNHG1-203ENST00000537024 OCSTAMPQ9BR26 566 aa6.57□□□□□ -1.36
SNHG1-203ENST00000537024 MKRN1Q9UHC7 482 aaKnown RBP6.57□□□□□ -1.36
SNHG1-203ENST00000537024 A2ML1A8K2U0 1454 aa6.57□□□□□ -1.36
SNHG1-203ENST00000537024 XIRP1Q702N8 1843 aaKnown RBP6.57□□□□□ -1.36
SNHG1-203ENST00000537024 NUP153P49790 1475 aaKnown RBP6.56□□□□□ -1.36
SNHG1-203ENST00000537024 FAM196BA6NMK8 535 aa6.56□□□□□ -1.36
SNHG1-203ENST00000537024 ATP5J2-PTCD1G3V325 749 aa6.56□□□□□ -1.36
SNHG1-203ENST00000537024 TNFRSF10AO00220 468 aa6.56□□□□□ -1.36
SNHG1-203ENST00000537024 ST8SIA5O15466 376 aa6.56□□□□□ -1.36
SNHG1-203ENST00000537024 DZIP3Q86Y13 1208 aaKnown RBP6.56□□□□□ -1.36
SNHG1-203ENST00000537024 SLC6A16Q9GZN6 736 aa6.56□□□□□ -1.36
SNHG1-203ENST00000537024 ESF1Q9H501 851 aaKnown RBP6.56□□□□□ -1.36
SNHG1-203ENST00000537024 AAASQ9NRG9 546 aa6.56□□□□□ -1.36
SNHG1-203ENST00000537024 ZMIZ1Q9ULJ6 1067 aa6.56□□□□□ -1.36
SNHG1-203ENST00000537024 IVNS1ABPQ9Y6Y0 642 aa6.56□□□□□ -1.36
SNHG1-203ENST00000537024 DEPDC5O75140 1603 aa6.56□□□□□ -1.36
SNHG1-203ENST00000537024 FAM135BQ49AJ0 1406 aa6.56□□□□□ -1.36
SNHG1-203ENST00000537024 ZMYM3Q14202 1370 aa6.56□□□□□ -1.36
SNHG1-203ENST00000537024 IQGAP1P46940 1657 aa6.55□□□□□ -1.36
SNHG1-203ENST00000537024 CLTCQ00610 1675 aaKnown RBP6.55□□□□□ -1.36
SNHG1-203ENST00000537024 ROBO1Q9Y6N7 1651 aa6.55□□□□□ -1.36
SNHG1-203ENST00000537024 LRP6O75581 1613 aa6.55□□□□□ -1.36
SNHG1-203ENST00000537024 MAGEB6P1A0A0J9YX57 407 aa6.55□□□□□ -1.36
SNHG1-203ENST00000537024 USP17L15C9J2P7 530 aa6.55□□□□□ -1.36
SNHG1-203ENST00000537024 USP17L10C9JJH3 530 aa6.55□□□□□ -1.36
SNHG1-203ENST00000537024 USP17L13C9JLJ4 530 aa6.55□□□□□ -1.36
SNHG1-203ENST00000537024 USP17L12C9JPN9 530 aa6.55□□□□□ -1.36
SNHG1-203ENST00000537024 USP17L11C9JVI0 530 aa6.55□□□□□ -1.36
SNHG1-203ENST00000537024 USP17L21D6R901 530 aa6.55□□□□□ -1.36
SNHG1-203ENST00000537024 USP17L18D6R9N7 530 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms