RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 ATG3Q9NT62 314 aa26.92■■□□□ 1.9
TNFRSF1B-204ENST00000536782 GRIN3BO60391 1043 aa26.91■■□□□ 1.9
TNFRSF1B-204ENST00000536782 HSP90AB1P08238 724 aaKnown RBP26.91■■□□□ 1.9
TNFRSF1B-204ENST00000536782 ITPK1Q13572 414 aa26.91■■□□□ 1.9
TNFRSF1B-204ENST00000536782 ERVV-2B6SEH9 535 aa26.9■■□□□ 1.9
TNFRSF1B-204ENST00000536782 AMOTQ4VCS5 1084 aa26.9■■□□□ 1.9
TNFRSF1B-204ENST00000536782 DCAF5Q96JK2 942 aa26.9■■□□□ 1.9
TNFRSF1B-204ENST00000536782 GNPATO15228 680 aa26.88■■□□□ 1.89
TNFRSF1B-204ENST00000536782 C1QTNF8P60827 252 aa26.87■■□□□ 1.89
TNFRSF1B-204ENST00000536782 ZNF530Q6P9A1 599 aaPredicted RBP26.87■■□□□ 1.89
TNFRSF1B-204ENST00000536782 AEBP1Q8IUX7 1158 aa26.85■■□□□ 1.89
TNFRSF1B-204ENST00000536782 RBM42Q9BTD8 480 aaKnown RBP26.84■■□□□ 1.89
TNFRSF1B-204ENST00000536782 KDRP35968 1356 aa26.84■■□□□ 1.89
TNFRSF1B-204ENST00000536782 CABP4P57796 275 aa26.83■■□□□ 1.89
TNFRSF1B-204ENST00000536782 C1orf141Q5JVX7 400 aa26.83■■□□□ 1.89
TNFRSF1B-204ENST00000536782 ZNF831Q5JPB2 1677 aa26.82■■□□□ 1.88
TNFRSF1B-204ENST00000536782 KDM6AO15550 1401 aaPredicted RBP26.82■■□□□ 1.88
TNFRSF1B-204ENST00000536782 MTHFSP49914 203 aa26.82■■□□□ 1.88
TNFRSF1B-204ENST00000536782 SULT6B1Q6IMI4 303 aa26.82■■□□□ 1.88
TNFRSF1B-204ENST00000536782 COL5A3P25940 1745 aaPredicted RBP26.82■■□□□ 1.88
TNFRSF1B-204ENST00000536782 AMER1Q5JTC6 1135 aaPredicted RBP26.81■■□□□ 1.88
TNFRSF1B-204ENST00000536782 SLC4A9Q96Q91 983 aa26.81■■□□□ 1.88
TNFRSF1B-204ENST00000536782 KIF7Q2M1P5 1343 aa26.81■■□□□ 1.88
TNFRSF1B-204ENST00000536782 MYH14Q7Z406 1995 aaKnown RBP26.8■■□□□ 1.88
TNFRSF1B-204ENST00000536782 IL13P35225 146 aa26.8■■□□□ 1.88
TNFRSF1B-204ENST00000536782 RTCBQ9Y3I0 505 aaKnown RBP26.8■■□□□ 1.88
TNFRSF1B-204ENST00000536782 CEP350Q5VT06 3117 aa26.8■■□□□ 1.88
TNFRSF1B-204ENST00000536782 TRAPPC3LQ5T215 181 aa26.79■■□□□ 1.88
TNFRSF1B-204ENST00000536782 KIAA1551Q9HCM1 1747 aa26.79■■□□□ 1.88
TNFRSF1B-204ENST00000536782 KIF13BQ9NQT8 1826 aa26.79■■□□□ 1.88
TNFRSF1B-204ENST00000536782 RC3H1Q5TC82 1133 aaKnown RBP26.78■■□□□ 1.88
TNFRSF1B-204ENST00000536782 SENP3-EIF4A1A0A087X0R7 540 aa26.76■■□□□ 1.87
TNFRSF1B-204ENST00000536782 CNTNAP4Q9C0A0 1308 aa26.75■■□□□ 1.87
TNFRSF1B-204ENST00000536782 NFATC2IPQ8NCF5 419 aa26.75■■□□□ 1.87
TNFRSF1B-204ENST00000536782 GIGYF1O75420 1035 aaPredicted RBP26.74■■□□□ 1.87
TNFRSF1B-204ENST00000536782 MMP10P09238 476 aa26.74■■□□□ 1.87
TNFRSF1B-204ENST00000536782 ADRA2BP18089 450 aa26.74■■□□□ 1.87
TNFRSF1B-204ENST00000536782 PTCD1O75127 700 aaKnown RBP26.73■■□□□ 1.87
TNFRSF1B-204ENST00000536782 RPS6KA4O75676 772 aa26.73■■□□□ 1.87
TNFRSF1B-204ENST00000536782 NLGN1Q8N2Q7 840 aa26.73■■□□□ 1.87
TNFRSF1B-204ENST00000536782 ARHGEF1Q92888 912 aaKnown RBP26.73■■□□□ 1.87
TNFRSF1B-204ENST00000536782 ATP10DQ9P241 1426 aa26.73■■□□□ 1.87
TNFRSF1B-204ENST00000536782 ADCY9O60503 1353 aa26.72■■□□□ 1.87
TNFRSF1B-204ENST00000536782 N4BP2Q86UW6 1770 aaPredicted RBP26.72■■□□□ 1.87
TNFRSF1B-204ENST00000536782 C4AP0C0L4 1744 aa26.71■■□□□ 1.87
TNFRSF1B-204ENST00000536782 PER1O15534 1290 aaPredicted RBP26.71■■□□□ 1.87
TNFRSF1B-204ENST00000536782 WWC3Q9ULE0 1092 aa26.71■■□□□ 1.87
TNFRSF1B-204ENST00000536782 RFC4P35249 363 aa26.7■■□□□ 1.86
TNFRSF1B-204ENST00000536782 AKAP4Q5JQC9 854 aa26.7■■□□□ 1.86
TNFRSF1B-204ENST00000536782 SCN11AQ9UI33 1791 aa26.7■■□□□ 1.86
TNFRSF1B-204ENST00000536782 VIRMAQ69YN4 1812 aaKnown RBP26.69■■□□□ 1.86
TNFRSF1B-204ENST00000536782 CC2D1BQ5T0F9 858 aaKnown RBP26.68■■□□□ 1.86
TNFRSF1B-204ENST00000536782 BRCA1P38398 1863 aaKnown RBP26.68■■□□□ 1.86
TNFRSF1B-204ENST00000536782 HMOX1P09601 288 aa26.67■■□□□ 1.86
TNFRSF1B-204ENST00000536782 GYS1P13807 737 aa26.67■■□□□ 1.86
TNFRSF1B-204ENST00000536782 CICQ96RK0 1608 aaPredicted RBP26.67■■□□□ 1.86
TNFRSF1B-204ENST00000536782 TJP1Q07157 1748 aa26.66■■□□□ 1.86
TNFRSF1B-204ENST00000536782 CRKLP46109 303 aaKnown RBP26.66■■□□□ 1.86
TNFRSF1B-204ENST00000536782 DIAPH1O60610 1272 aaKnown RBP26.65■■□□□ 1.86
TNFRSF1B-204ENST00000536782 SLC52A2Q9HAB3 445 aa26.65■■□□□ 1.86
TNFRSF1B-204ENST00000536782 PXDNLA1KZ92 1463 aa26.65■■□□□ 1.86
TNFRSF1B-204ENST00000536782 TGFB2P61812 414 aa26.64■■□□□ 1.86
TNFRSF1B-204ENST00000536782 LGR6Q9HBX8 967 aa26.64■■□□□ 1.86
TNFRSF1B-204ENST00000536782 CCDC87Q9NVE4 849 aa26.63■■□□□ 1.85
TNFRSF1B-204ENST00000536782 PARP3Q9Y6F1 533 aa26.63■■□□□ 1.85
TNFRSF1B-204ENST00000536782 ADAMTS7Q9UKP4 1686 aa26.61■■□□□ 1.85
TNFRSF1B-204ENST00000536782 RNMTO43148 476 aaKnown RBP26.61■■□□□ 1.85
TNFRSF1B-204ENST00000536782 C10orf71Q711Q0 1435 aa26.61■■□□□ 1.85
TNFRSF1B-204ENST00000536782 MTHFSDQ2M296 383 aaKnown RBP26.6■■□□□ 1.85
TNFRSF1B-204ENST00000536782 GPBP1L1Q9HC44 474 aaPredicted RBP26.6■■□□□ 1.85
TNFRSF1B-204ENST00000536782 A0A0G2JLW4 131 aa26.59■■□□□ 1.85
TNFRSF1B-204ENST00000536782 NPC1L1Q9UHC9 1359 aa26.58■■□□□ 1.85
TNFRSF1B-204ENST00000536782 MRC1P22897 1456 aa26.58■■□□□ 1.85
TNFRSF1B-204ENST00000536782 INTS5Q6P9B9 1019 aaKnown RBP26.58■■□□□ 1.85
TNFRSF1B-204ENST00000536782 SRP68Q9UHB9 627 aaKnown RBP26.58■■□□□ 1.85
TNFRSF1B-204ENST00000536782 USP42Q9H9J4 1324 aaKnown RBP26.58■■□□□ 1.85
TNFRSF1B-204ENST00000536782 DNAJC10Q8IXB1 793 aa26.57■■□□□ 1.84
TNFRSF1B-204ENST00000536782 BCS1LQ9Y276 419 aa26.57■■□□□ 1.84
TNFRSF1B-204ENST00000536782 SLC39A6Q13433 755 aa26.56■■□□□ 1.84
TNFRSF1B-204ENST00000536782 CNGB1Q14028 1251 aaPredicted RBP26.56■■□□□ 1.84
TNFRSF1B-204ENST00000536782 ARFGEF1Q9Y6D6 1849 aa26.55■■□□□ 1.84
TNFRSF1B-204ENST00000536782 DPEP1P16444 411 aa26.55■■□□□ 1.84
TNFRSF1B-204ENST00000536782 FKBP8Q14318 412 aa26.55■■□□□ 1.84
TNFRSF1B-204ENST00000536782 ZNF526Q8TF50 670 aaPredicted RBP26.55■■□□□ 1.84
TNFRSF1B-204ENST00000536782 U2SURPO15042 1029 aaKnown RBP26.53■■□□□ 1.84
TNFRSF1B-204ENST00000536782 ZPR1O75312 459 aa26.52■■□□□ 1.84
TNFRSF1B-204ENST00000536782 CYP19A1P11511 503 aaPredicted RBP26.52■■□□□ 1.84
TNFRSF1B-204ENST00000536782 COL3A1P02461 1466 aaPredicted RBP26.51■■□□□ 1.83
TNFRSF1B-204ENST00000536782 SOS1Q07889 1333 aaPredicted RBP26.51■■□□□ 1.83
TNFRSF1B-204ENST00000536782 KCPQ6ZWJ8 1503 aa26.5■■□□□ 1.83
TNFRSF1B-204ENST00000536782 FCHSD2O94868 740 aa26.5■■□□□ 1.83
TNFRSF1B-204ENST00000536782 KCNA3P22001 575 aa26.5■■□□□ 1.83
TNFRSF1B-204ENST00000536782 DDR1Q08345 913 aa26.5■■□□□ 1.83
TNFRSF1B-204ENST00000536782 VSIG10Q8N0Z9 540 aa26.5■■□□□ 1.83
TNFRSF1B-204ENST00000536782 USPL1Q5W0Q7 1092 aa26.49■■□□□ 1.83
TNFRSF1B-204ENST00000536782 ARHGAP27Q6ZUM4 889 aa26.49■■□□□ 1.83
TNFRSF1B-204ENST00000536782 KIF3CO14782 793 aa26.48■■□□□ 1.83
TNFRSF1B-204ENST00000536782 TM4SF1P30408 202 aa26.48■■□□□ 1.83
TNFRSF1B-204ENST00000536782 GAS2L2Q8NHY3 880 aa26.48■■□□□ 1.83
TNFRSF1B-204ENST00000536782 AFDNP55196 1824 aaKnown RBP26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms