RNA–Protein interactions for RNA: ENST00000536559.1

CCND1-203, Transcript of cyclin D1, humanhuman

TSL 3 BASIC

Gene CCND1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-203ENST00000536559 SSFA2P28290 1259 aa22.53■■□□□ 1.2
CCND1-203ENST00000536559 AEBP1Q8IUX7 1158 aa22.53■■□□□ 1.2
CCND1-203ENST00000536559 RBM42Q9BTD8 480 aaKnown RBP22.53■■□□□ 1.2
CCND1-203ENST00000536559 COL24A1Q17RW2 1714 aa22.52■■□□□ 1.2
CCND1-203ENST00000536559 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.52■■□□□ 1.2
CCND1-203ENST00000536559 GNPATO15228 680 aa22.51■■□□□ 1.19
CCND1-203ENST00000536559 LINC00116Q8NCU8 138 aa22.51■■□□□ 1.19
CCND1-203ENST00000536559 PER1O15534 1290 aaPredicted RBP22.5■■□□□ 1.19
CCND1-203ENST00000536559 DIAPH1O60610 1272 aaKnown RBP22.49■■□□□ 1.19
CCND1-203ENST00000536559 ITPK1Q13572 414 aa22.48■■□□□ 1.19
CCND1-203ENST00000536559 CNGB1Q14028 1251 aaPredicted RBP22.48■■□□□ 1.19
CCND1-203ENST00000536559 CD2APQ9Y5K6 639 aa22.48■■□□□ 1.19
CCND1-203ENST00000536559 KDRP35968 1356 aa22.48■■□□□ 1.19
CCND1-203ENST00000536559 AKAP4Q5JQC9 854 aa22.47■■□□□ 1.19
CCND1-203ENST00000536559 NLGN2Q8NFZ4 835 aa22.47■■□□□ 1.19
CCND1-203ENST00000536559 RTCBQ9Y3I0 505 aaKnown RBP22.47■■□□□ 1.19
CCND1-203ENST00000536559 GRIN3BO60391 1043 aa22.46■■□□□ 1.19
CCND1-203ENST00000536559 TRAPPC3LQ5T215 181 aa22.46■■□□□ 1.19
CCND1-203ENST00000536559 NFATC2IPQ8NCF5 419 aa22.46■■□□□ 1.19
CCND1-203ENST00000536559 CHD4Q14839 1912 aa22.45■■□□□ 1.18
CCND1-203ENST00000536559 UBR3Q6ZT12 1888 aa22.45■■□□□ 1.18
CCND1-203ENST00000536559 KDM6AO15550 1401 aaPredicted RBP22.44■■□□□ 1.18
CCND1-203ENST00000536559 HMOX1P09601 288 aa22.44■■□□□ 1.18
CCND1-203ENST00000536559 NPC1L1Q9UHC9 1359 aa22.44■■□□□ 1.18
CCND1-203ENST00000536559 PTCD1O75127 700 aaKnown RBP22.43■■□□□ 1.18
CCND1-203ENST00000536559 RC3H1Q5TC82 1133 aaKnown RBP22.43■■□□□ 1.18
CCND1-203ENST00000536559 ADRA2BP18089 450 aa22.42■■□□□ 1.18
CCND1-203ENST00000536559 SMIM5Q71RC9 77 aa22.42■■□□□ 1.18
CCND1-203ENST00000536559 AMIGO3Q86WK7 504 aa22.42■■□□□ 1.18
CCND1-203ENST00000536559 UTRNP46939 3433 aa22.41■■□□□ 1.18
CCND1-203ENST00000536559 RFC4P35249 363 aa22.41■■□□□ 1.18
CCND1-203ENST00000536559 CNTNAP4Q9C0A0 1308 aa22.4■■□□□ 1.18
CCND1-203ENST00000536559 U2SURPO15042 1029 aaKnown RBP22.4■■□□□ 1.18
CCND1-203ENST00000536559 NLGN1Q8N2Q7 840 aa22.4■■□□□ 1.18
CCND1-203ENST00000536559 ZNF784Q8NCA9 323 aaPredicted RBP22.4■■□□□ 1.18
CCND1-203ENST00000536559 CFAP53Q96M91 514 aa22.4■■□□□ 1.18
CCND1-203ENST00000536559 RPS6KA4O75676 772 aa22.39■■□□□ 1.17
CCND1-203ENST00000536559 SLC4A9Q96Q91 983 aa22.39■■□□□ 1.17
CCND1-203ENST00000536559 ZNF831Q5JPB2 1677 aa22.39■■□□□ 1.17
CCND1-203ENST00000536559 SLC52A2Q9HAB3 445 aa22.38■■□□□ 1.17
CCND1-203ENST00000536559 RNMTO43148 476 aaKnown RBP22.36■■□□□ 1.17
CCND1-203ENST00000536559 MMP10P09238 476 aa22.36■■□□□ 1.17
CCND1-203ENST00000536559 MTHFSDQ2M296 383 aaKnown RBP22.36■■□□□ 1.17
CCND1-203ENST00000536559 ARHGEF1Q92888 912 aaKnown RBP22.36■■□□□ 1.17
CCND1-203ENST00000536559 SCN11AQ9UI33 1791 aa22.35■■□□□ 1.17
CCND1-203ENST00000536559 LGR6Q9HBX8 967 aa22.35■■□□□ 1.17
CCND1-203ENST00000536559 YBX3P16989 372 aaKnown RBP eCLIP22.34■■□□□ 1.179e-6■■■□□ 18.6
CCND1-203ENST00000536559 CRKLP46109 303 aaKnown RBP22.34■■□□□ 1.17
CCND1-203ENST00000536559 NUDCQ9Y266 331 aa22.34■■□□□ 1.17
CCND1-203ENST00000536559 GOLGB1Q14789 3259 aaKnown RBP22.33■■□□□ 1.17
CCND1-203ENST00000536559 GAS2L2Q8NHY3 880 aa22.33■■□□□ 1.17
CCND1-203ENST00000536559 PARP3Q9Y6F1 533 aa22.32■■□□□ 1.16
CCND1-203ENST00000536559 CCDC87Q9NVE4 849 aa22.31■■□□□ 1.16
CCND1-203ENST00000536559 COL5A3P25940 1745 aaPredicted RBP22.31■■□□□ 1.16
CCND1-203ENST00000536559 TTC5Q8N0Z6 440 aa22.3■■□□□ 1.16
CCND1-203ENST00000536559 GNAT3A8MTJ3 354 aa22.29■■□□□ 1.16
CCND1-203ENST00000536559 GYS1P13807 737 aa22.29■■□□□ 1.16
CCND1-203ENST00000536559 TEFQ10587 303 aa22.29■■□□□ 1.16
CCND1-203ENST00000536559 ZPR1O75312 459 aa22.28■■□□□ 1.16
CCND1-203ENST00000536559 SLC39A6Q13433 755 aa22.28■■□□□ 1.16
CCND1-203ENST00000536559 TGFB2P61812 414 aa22.27■■□□□ 1.16
CCND1-203ENST00000536559 DNAJC10Q8IXB1 793 aa22.27■■□□□ 1.16
CCND1-203ENST00000536559 VSIG10Q8N0Z9 540 aa22.27■■□□□ 1.16
CCND1-203ENST00000536559 MYH14Q7Z406 1995 aaKnown RBP22.26■■□□□ 1.15
CCND1-203ENST00000536559 INTS5Q6P9B9 1019 aaKnown RBP22.25■■□□□ 1.15
CCND1-203ENST00000536559 WWC3Q9ULE0 1092 aa22.25■■□□□ 1.15
CCND1-203ENST00000536559 COL3A1P02461 1466 aaPredicted RBP22.25■■□□□ 1.15
CCND1-203ENST00000536559 MRC1P22897 1456 aa22.24■■□□□ 1.15
CCND1-203ENST00000536559 STARD3NLO95772 234 aa22.24■■□□□ 1.15
CCND1-203ENST00000536559 U2AF1L5P0DN76 240 aaPredicted RBP22.24■■□□□ 1.15
CCND1-203ENST00000536559 PPP2R1AP30153 589 aa22.24■■□□□ 1.15
CCND1-203ENST00000536559 U2AF1Q01081 240 aaKnown RBP eCLIP22.24■■□□□ 1.15
CCND1-203ENST00000536559 VIRMAQ69YN4 1812 aaKnown RBP22.24■■□□□ 1.15
CCND1-203ENST00000536559 CYP19A1P11511 503 aaPredicted RBP22.23■■□□□ 1.15
CCND1-203ENST00000536559 PRKAR2BP31323 418 aa22.23■■□□□ 1.15
CCND1-203ENST00000536559 USP42Q9H9J4 1324 aaKnown RBP22.23■■□□□ 1.15
CCND1-203ENST00000536559 CICQ96RK0 1608 aaPredicted RBP22.22■■□□□ 1.15
CCND1-203ENST00000536559 GIGYF1O75420 1035 aaPredicted RBP22.22■■□□□ 1.15
CCND1-203ENST00000536559 TEX13AQ9BXU3 409 aaPredicted RBP22.22■■□□□ 1.15
CCND1-203ENST00000536559 SRP68Q9UHB9 627 aaKnown RBP22.22■■□□□ 1.15
CCND1-203ENST00000536559 TJP1Q07157 1748 aa22.22■■□□□ 1.15
CCND1-203ENST00000536559 NEFMP07197 916 aa22.21■■□□□ 1.15
CCND1-203ENST00000536559 NPM2Q86SE8 214 aaKnown RBP22.21■■□□□ 1.15
CCND1-203ENST00000536559 RTF1Q92541 710 aaKnown RBP22.21■■□□□ 1.15
CCND1-203ENST00000536559 A0A0G2JLW4 131 aa22.2■■□□□ 1.14
CCND1-203ENST00000536559 FCHSD2O94868 740 aa22.2■■□□□ 1.14
CCND1-203ENST00000536559 FKBP8Q14318 412 aa22.2■■□□□ 1.14
CCND1-203ENST00000536559 IL17REQ8NFR9 667 aa22.2■■□□□ 1.14
CCND1-203ENST00000536559 RSPH6AQ9H0K4 717 aa22.2■■□□□ 1.14
CCND1-203ENST00000536559 C4AP0C0L4 1744 aa22.2■■□□□ 1.14
CCND1-203ENST00000536559 USPL1Q5W0Q7 1092 aa22.19■■□□□ 1.14
CCND1-203ENST00000536559 ZNF790Q6PG37 636 aa22.19■■□□□ 1.14
CCND1-203ENST00000536559 BCS1LQ9Y276 419 aa22.19■■□□□ 1.14
CCND1-203ENST00000536559 SOS1Q07889 1333 aaPredicted RBP22.19■■□□□ 1.14
CCND1-203ENST00000536559 ADAMTS7Q9UKP4 1686 aa22.18■■□□□ 1.14
CCND1-203ENST00000536559 CANXP27824 592 aaKnown RBP22.18■■□□□ 1.14
CCND1-203ENST00000536559 NARFQ9UHQ1 456 aa22.18■■□□□ 1.14
CCND1-203ENST00000536559 C10orf71Q711Q0 1435 aa22.17■■□□□ 1.14
CCND1-203ENST00000536559 A0A087WZG4 1122 aa22.17■■□□□ 1.14
CCND1-203ENST00000536559 BTBD11A6QL63 1104 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms