RNA–Protein interactions for RNA: ENST00000536411.1

SCNN1A-209, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 2

Gene SCNN1A, Length 593 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-209ENST00000536411 SSFA2P28290 1259 aa18.98■□□□□ 0.63
SCNN1A-209ENST00000536411 ATG3Q9NT62 314 aa18.98■□□□□ 0.63
SCNN1A-209ENST00000536411 ASAP1Q9ULH1 1129 aa18.98■□□□□ 0.63
SCNN1A-209ENST00000536411 SCN11AQ9UI33 1791 aa18.98■□□□□ 0.63
SCNN1A-209ENST00000536411 FCHSD2O94868 740 aa18.97■□□□□ 0.63
SCNN1A-209ENST00000536411 ATF5Q9Y2D1 282 aaPredicted RBP18.97■□□□□ 0.63
SCNN1A-209ENST00000536411 MAP3K5Q99683 1374 aa18.96■□□□□ 0.63
SCNN1A-209ENST00000536411 MSH5O43196 834 aa18.96■□□□□ 0.63
SCNN1A-209ENST00000536411 PTGER2P43116 358 aa18.96■□□□□ 0.63
SCNN1A-209ENST00000536411 ARXQ96QS3 562 aa18.96■□□□□ 0.63
SCNN1A-209ENST00000536411 SLC52A2Q9HAB3 445 aa18.96■□□□□ 0.63
SCNN1A-209ENST00000536411 GNAT3A8MTJ3 354 aa18.95■□□□□ 0.62
SCNN1A-209ENST00000536411 RNMTO43148 476 aaKnown RBP18.95■□□□□ 0.62
SCNN1A-209ENST00000536411 U2AF1L5P0DN76 240 aaPredicted RBP18.95■□□□□ 0.62
SCNN1A-209ENST00000536411 ADRA2BP18089 450 aa18.95■□□□□ 0.62
SCNN1A-209ENST00000536411 KCNQ4P56696 695 aa18.95■□□□□ 0.62
SCNN1A-209ENST00000536411 U2AF1Q01081 240 aaKnown RBP eCLIP18.95■□□□□ 0.62
SCNN1A-209ENST00000536411 MTHFSDQ2M296 383 aaKnown RBP18.95■□□□□ 0.62
SCNN1A-209ENST00000536411 RC3H1Q5TC82 1133 aaKnown RBP18.95■□□□□ 0.62
SCNN1A-209ENST00000536411 NFATC2IPQ8NCF5 419 aa18.94■□□□□ 0.62
SCNN1A-209ENST00000536411 SGIP1Q9BQI5 828 aa18.94■□□□□ 0.62
SCNN1A-209ENST00000536411 RBM42Q9BTD8 480 aaKnown RBP18.94■□□□□ 0.62
SCNN1A-209ENST00000536411 PDGFDQ9GZP0 370 aaPredicted RBP18.94■□□□□ 0.62
SCNN1A-209ENST00000536411 TUBGCP6Q96RT7 1819 aa18.94■□□□□ 0.62
SCNN1A-209ENST00000536411 CNTNAP4Q9C0A0 1308 aa18.94■□□□□ 0.62
SCNN1A-209ENST00000536411 CICQ96RK0 1608 aaPredicted RBP18.93■□□□□ 0.62
SCNN1A-209ENST00000536411 ADAMTS7Q9UKP4 1686 aa18.93■□□□□ 0.62
SCNN1A-209ENST00000536411 COL24A1Q17RW2 1714 aa18.92■□□□□ 0.62
SCNN1A-209ENST00000536411 PRKAR2BP31323 418 aa18.92■□□□□ 0.62
SCNN1A-209ENST00000536411 TEFQ10587 303 aa18.92■□□□□ 0.62
SCNN1A-209ENST00000536411 RSPH6AQ9H0K4 717 aa18.92■□□□□ 0.62
SCNN1A-209ENST00000536411 RTCBQ9Y3I0 505 aaKnown RBP18.92■□□□□ 0.62
SCNN1A-209ENST00000536411 GNPATO15228 680 aa18.91■□□□□ 0.62
SCNN1A-209ENST00000536411 COL23A1Q86Y22 540 aaPredicted RBP18.91■□□□□ 0.62
SCNN1A-209ENST00000536411 TTC5Q8N0Z6 440 aa18.91■□□□□ 0.62
SCNN1A-209ENST00000536411 LINC00116Q8NCU8 138 aa18.91■□□□□ 0.62
SCNN1A-209ENST00000536411 RTF1Q92541 710 aaKnown RBP18.91■□□□□ 0.62
SCNN1A-209ENST00000536411 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.9■□□□□ 0.62
SCNN1A-209ENST00000536411 HTATSF1O43719 755 aaKnown RBP18.9■□□□□ 0.62
SCNN1A-209ENST00000536411 VSIG10Q8N0Z9 540 aa18.9■□□□□ 0.62
SCNN1A-209ENST00000536411 UBR3Q6ZT12 1888 aa18.9■□□□□ 0.62
SCNN1A-209ENST00000536411 DDX10Q13206 875 aaKnown RBP18.89■□□□□ 0.61
SCNN1A-209ENST00000536411 ITPK1Q13572 414 aa18.89■□□□□ 0.61
SCNN1A-209ENST00000536411 MYBBP1AQ9BQG0 1328 aaKnown RBP18.88■□□□□ 0.61
SCNN1A-209ENST00000536411 PTCD1O75127 700 aaKnown RBP18.87■□□□□ 0.61
SCNN1A-209ENST00000536411 COL5A3P25940 1745 aaPredicted RBP18.87■□□□□ 0.61
SCNN1A-209ENST00000536411 TRAPPC3LQ5T215 181 aa18.87■□□□□ 0.61
SCNN1A-209ENST00000536411 SYT17Q9BSW7 474 aa18.87■□□□□ 0.61
SCNN1A-209ENST00000536411 TEX13AQ9BXU3 409 aaPredicted RBP18.87■□□□□ 0.61
SCNN1A-209ENST00000536411 FHDC1Q9C0D6 1143 aaPredicted RBP18.87■□□□□ 0.61
SCNN1A-209ENST00000536411 CEMIPQ8WUJ3 1361 aa18.86■□□□□ 0.61
SCNN1A-209ENST00000536411 MAPK8IP3Q9UPT6 1336 aa18.86■□□□□ 0.61
SCNN1A-209ENST00000536411 RPS6KA4O75676 772 aa18.86■□□□□ 0.61
SCNN1A-209ENST00000536411 PHF14O94880 888 aa18.86■□□□□ 0.61
SCNN1A-209ENST00000536411 LGR6Q9HBX8 967 aa18.86■□□□□ 0.61
SCNN1A-209ENST00000536411 VIRMAQ69YN4 1812 aaKnown RBP18.86■□□□□ 0.61
SCNN1A-209ENST00000536411 NLGN1Q8N2Q7 840 aa18.84■□□□□ 0.61
SCNN1A-209ENST00000536411 SRCAPQ6ZRS2 3230 aa18.83■□□□□ 0.61
SCNN1A-209ENST00000536411 STARD3NLO95772 234 aa18.83■□□□□ 0.6
SCNN1A-209ENST00000536411 RFC4P35249 363 aa18.83■□□□□ 0.6
SCNN1A-209ENST00000536411 CRKLP46109 303 aaKnown RBP18.83■□□□□ 0.6
SCNN1A-209ENST00000536411 SLC4A9Q96Q91 983 aa18.82■□□□□ 0.6
SCNN1A-209ENST00000536411 CD2APQ9Y5K6 639 aa18.82■□□□□ 0.6
SCNN1A-209ENST00000536411 ZNF790Q6PG37 636 aa18.81■□□□□ 0.6
SCNN1A-209ENST00000536411 IL17REQ8NFR9 667 aa18.81■□□□□ 0.6
SCNN1A-209ENST00000536411 PNISRQ8TF01 805 aaKnown RBP18.81■□□□□ 0.6
SCNN1A-209ENST00000536411 PHACTR3Q96KR7 559 aa18.81■□□□□ 0.6
SCNN1A-209ENST00000536411 FMNL2Q96PY5 1086 aa18.81■□□□□ 0.6
SCNN1A-209ENST00000536411 CCDC87Q9NVE4 849 aa18.81■□□□□ 0.6
SCNN1A-209ENST00000536411 TJP1Q07157 1748 aa18.8■□□□□ 0.6
SCNN1A-209ENST00000536411 KCPQ6ZWJ8 1503 aa18.8■□□□□ 0.6
SCNN1A-209ENST00000536411 NPM2Q86SE8 214 aaKnown RBP18.8■□□□□ 0.6
SCNN1A-209ENST00000536411 KLHL34Q8N239 644 aa18.8■□□□□ 0.6
SCNN1A-209ENST00000536411 UBR2Q8IWV8 1755 aa18.8■□□□□ 0.6
SCNN1A-209ENST00000536411 BTBD11A6QL63 1104 aa18.79■□□□□ 0.6
SCNN1A-209ENST00000536411 LMOD3Q0VAK6 560 aa18.79■□□□□ 0.6
SCNN1A-209ENST00000536411 MSL1Q68DK7 614 aa18.79■□□□□ 0.6
SCNN1A-209ENST00000536411 SIPA1L3O60292 1781 aaPredicted RBP18.78■□□□□ 0.6
SCNN1A-209ENST00000536411 A0A087WZG4 1122 aa18.78■□□□□ 0.6
SCNN1A-209ENST00000536411 SLC39A6Q13433 755 aa18.78■□□□□ 0.6
SCNN1A-209ENST00000536411 WDR43Q15061 677 aaKnown RBP eCLIP18.78■□□□□ 0.6
SCNN1A-209ENST00000536411 ARHGEF1Q92888 912 aaKnown RBP18.78■□□□□ 0.6
SCNN1A-209ENST00000536411 HEG1Q9ULI3 1381 aa18.78■□□□□ 0.6
SCNN1A-209ENST00000536411 DNAJC10Q8IXB1 793 aa18.77■□□□□ 0.6
SCNN1A-209ENST00000536411 ZPR1O75312 459 aa18.76■□□□□ 0.59
SCNN1A-209ENST00000536411 CYP19A1P11511 503 aaPredicted RBP18.76■□□□□ 0.59
SCNN1A-209ENST00000536411 NFE2L2Q16236 605 aa18.76■□□□□ 0.59
SCNN1A-209ENST00000536411 PRKRIP1Q9H875 184 aaPredicted RBP18.76■□□□□ 0.59
SCNN1A-209ENST00000536411 SOS1Q07889 1333 aaPredicted RBP18.75■□□□□ 0.59
SCNN1A-209ENST00000536411 PLEKHF1Q96S99 279 aa18.75■□□□□ 0.59
SCNN1A-209ENST00000536411 PARP3Q9Y6F1 533 aa18.75■□□□□ 0.59
SCNN1A-209ENST00000536411 USP42Q9H9J4 1324 aaKnown RBP18.74■□□□□ 0.59
SCNN1A-209ENST00000536411 COL15A1P39059 1388 aa18.74■□□□□ 0.59
SCNN1A-209ENST00000536411 GRIN3BO60391 1043 aa18.74■□□□□ 0.59
SCNN1A-209ENST00000536411 TAF7Q15545 349 aaPredicted RBP18.74■□□□□ 0.59
SCNN1A-209ENST00000536411 GPR162Q16538 588 aa18.74■□□□□ 0.59
SCNN1A-209ENST00000536411 INTS5Q6P9B9 1019 aaKnown RBP18.74■□□□□ 0.59
SCNN1A-209ENST00000536411 AMIGO3Q86WK7 504 aa18.74■□□□□ 0.59
SCNN1A-209ENST00000536411 MMP10P09238 476 aa18.73■□□□□ 0.59
SCNN1A-209ENST00000536411 ZNF496Q96IT1 587 aaPredicted RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms