RNA–Protein interactions for RNA: ENST00000536196.1

CHFR-212, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 597 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-212ENST00000536196 AK7Q96M32 723 aa28.46■■■□□ 2.15
CHFR-212ENST00000536196 ATG3Q9NT62 314 aa28.46■■■□□ 2.15
CHFR-212ENST00000536196 DIAPH1O60610 1272 aaKnown RBP28.45■■■□□ 2.14
CHFR-212ENST00000536196 CNGB1Q14028 1251 aaPredicted RBP28.45■■■□□ 2.14
CHFR-212ENST00000536196 ATP6V1AP38606 617 aa28.42■■■□□ 2.14
CHFR-212ENST00000536196 CABP4P57796 275 aa28.42■■■□□ 2.14
CHFR-212ENST00000536196 COL3A1P02461 1466 aaPredicted RBP28.41■■■□□ 2.14
CHFR-212ENST00000536196 HMOX1P09601 288 aa28.41■■■□□ 2.14
CHFR-212ENST00000536196 LINC00116Q8NCU8 138 aa28.41■■■□□ 2.14
CHFR-212ENST00000536196 COL5A3P25940 1745 aaPredicted RBP28.4■■■□□ 2.14
CHFR-212ENST00000536196 ITPK1Q13572 414 aa28.39■■■□□ 2.14
CHFR-212ENST00000536196 AKAP4Q5JQC9 854 aa28.38■■■□□ 2.13
CHFR-212ENST00000536196 KLHL34Q8N239 644 aa28.38■■■□□ 2.13
CHFR-212ENST00000536196 SSFA2P28290 1259 aa28.37■■■□□ 2.13
CHFR-212ENST00000536196 MSL1Q68DK7 614 aa28.37■■■□□ 2.13
CHFR-212ENST00000536196 RBM42Q9BTD8 480 aaKnown RBP28.37■■■□□ 2.13
CHFR-212ENST00000536196 PHF14O94880 888 aa28.36■■■□□ 2.13
CHFR-212ENST00000536196 AMIGO3Q86WK7 504 aa28.36■■■□□ 2.13
CHFR-212ENST00000536196 CHD4Q14839 1912 aa28.35■■■□□ 2.13
CHFR-212ENST00000536196 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.35■■■□□ 2.13
CHFR-212ENST00000536196 GNPATO15228 680 aa28.34■■■□□ 2.13
CHFR-212ENST00000536196 NFATC2IPQ8NCF5 419 aa28.34■■■□□ 2.13
CHFR-212ENST00000536196 YY1P25490 414 aa28.33■■■□□ 2.13
CHFR-212ENST00000536196 SLC4A9Q96Q91 983 aa28.33■■■□□ 2.13
CHFR-212ENST00000536196 ADAMTS7Q9UKP4 1686 aa28.32■■■□□ 2.12
CHFR-212ENST00000536196 CICQ96RK0 1608 aaPredicted RBP28.32■■■□□ 2.12
CHFR-212ENST00000536196 MYH14Q7Z406 1995 aaKnown RBP28.31■■■□□ 2.12
CHFR-212ENST00000536196 U2SURPO15042 1029 aaKnown RBP28.31■■■□□ 2.12
CHFR-212ENST00000536196 SMIM5Q71RC9 77 aa28.31■■■□□ 2.12
CHFR-212ENST00000536196 MRC1P22897 1456 aa28.31■■■□□ 2.12
CHFR-212ENST00000536196 TJP1Q07157 1748 aa28.3■■■□□ 2.12
CHFR-212ENST00000536196 CFAP53Q96M91 514 aa28.3■■■□□ 2.12
CHFR-212ENST00000536196 MTHFSDQ2M296 383 aaKnown RBP28.29■■■□□ 2.12
CHFR-212ENST00000536196 SLC52A2Q9HAB3 445 aa28.28■■■□□ 2.12
CHFR-212ENST00000536196 CNTNAP4Q9C0A0 1308 aa28.27■■■□□ 2.12
CHFR-212ENST00000536196 RNMTO43148 476 aaKnown RBP28.27■■■□□ 2.12
CHFR-212ENST00000536196 PTCD1O75127 700 aaKnown RBP28.27■■■□□ 2.12
CHFR-212ENST00000536196 RC3H1Q5TC82 1133 aaKnown RBP28.27■■■□□ 2.12
CHFR-212ENST00000536196 LGR6Q9HBX8 967 aa28.27■■■□□ 2.12
CHFR-212ENST00000536196 RTCBQ9Y3I0 505 aaKnown RBP28.27■■■□□ 2.12
CHFR-212ENST00000536196 NLGN2Q8NFZ4 835 aa28.25■■■□□ 2.11
CHFR-212ENST00000536196 C4AP0C0L4 1744 aa28.25■■■□□ 2.11
CHFR-212ENST00000536196 PPP2R1AP30153 589 aa28.24■■■□□ 2.11
CHFR-212ENST00000536196 GPR162Q16538 588 aa28.24■■■□□ 2.11
CHFR-212ENST00000536196 TRAPPC3LQ5T215 181 aa28.23■■■□□ 2.11
CHFR-212ENST00000536196 UTRNP46939 3433 aa28.23■■■□□ 2.11
CHFR-212ENST00000536196 ADRA2BP18089 450 aa28.22■■■□□ 2.11
CHFR-212ENST00000536196 RPS6KA4O75676 772 aa28.21■■■□□ 2.11
CHFR-212ENST00000536196 GAS2L2Q8NHY3 880 aa28.21■■■□□ 2.11
CHFR-212ENST00000536196 NUDCQ9Y266 331 aa28.21■■■□□ 2.11
CHFR-212ENST00000536196 CD2APQ9Y5K6 639 aa28.21■■■□□ 2.11
CHFR-212ENST00000536196 UBR2Q8IWV8 1755 aa28.21■■■□□ 2.11
CHFR-212ENST00000536196 SIPA1L3O60292 1781 aaPredicted RBP28.2■■■□□ 2.11
CHFR-212ENST00000536196 PELP1Q8IZL8 1130 aaKnown RBP28.19■■■□□ 2.1
CHFR-212ENST00000536196 CRKLP46109 303 aaKnown RBP28.18■■■□□ 2.1
CHFR-212ENST00000536196 KCPQ6ZWJ8 1503 aa28.18■■■□□ 2.1
CHFR-212ENST00000536196 ARHGEF1Q92888 912 aaKnown RBP28.17■■■□□ 2.1
CHFR-212ENST00000536196 GNAT3A8MTJ3 354 aa28.16■■■□□ 2.1
CHFR-212ENST00000536196 RFC4P35249 363 aa28.16■■■□□ 2.1
CHFR-212ENST00000536196 SLC39A6Q13433 755 aa28.16■■■□□ 2.1
CHFR-212ENST00000536196 RSPH6AQ9H0K4 717 aa28.16■■■□□ 2.1
CHFR-212ENST00000536196 PRKAR2BP31323 418 aa28.15■■■□□ 2.1
CHFR-212ENST00000536196 KIF13BQ9NQT8 1826 aa28.14■■■□□ 2.1
CHFR-212ENST00000536196 NLGN1Q8N2Q7 840 aa28.14■■■□□ 2.1
CHFR-212ENST00000536196 MMP10P09238 476 aa28.13■■■□□ 2.09
CHFR-212ENST00000536196 U2AF1L5P0DN76 240 aaPredicted RBP28.13■■■□□ 2.09
CHFR-212ENST00000536196 U2AF1Q01081 240 aaKnown RBP eCLIP28.13■■■□□ 2.09
CHFR-212ENST00000536196 DNAJC10Q8IXB1 793 aa28.13■■■□□ 2.09
CHFR-212ENST00000536196 GOLGB1Q14789 3259 aaKnown RBP28.13■■■□□ 2.09
CHFR-212ENST00000536196 TEFQ10587 303 aa28.12■■■□□ 2.09
CHFR-212ENST00000536196 PHACTR3Q96KR7 559 aa28.12■■■□□ 2.09
CHFR-212ENST00000536196 IL17REQ8NFR9 667 aa28.11■■■□□ 2.09
CHFR-212ENST00000536196 GYS1P13807 737 aa28.1■■■□□ 2.09
CHFR-212ENST00000536196 TTC5Q8N0Z6 440 aa28.1■■■□□ 2.09
CHFR-212ENST00000536196 CCDC87Q9NVE4 849 aa28.1■■■□□ 2.09
CHFR-212ENST00000536196 GRIN3BO60391 1043 aa28.09■■■□□ 2.09
CHFR-212ENST00000536196 FCHSD2O94868 740 aa28.09■■■□□ 2.09
CHFR-212ENST00000536196 YBX3P16989 372 aaKnown RBP eCLIP28.09■■■□□ 2.09
CHFR-212ENST00000536196 INTS5Q6P9B9 1019 aaKnown RBP28.09■■■□□ 2.09
CHFR-212ENST00000536196 VSIG10Q8N0Z9 540 aa28.09■■■□□ 2.09
CHFR-212ENST00000536196 CYP19A1P11511 503 aaPredicted RBP28.07■■■□□ 2.08
CHFR-212ENST00000536196 CEMIPQ8WUJ3 1361 aa28.07■■■□□ 2.08
CHFR-212ENST00000536196 USP42Q9H9J4 1324 aaKnown RBP28.06■■■□□ 2.08
CHFR-212ENST00000536196 KIAA1551Q9HCM1 1747 aa28.06■■■□□ 2.08
CHFR-212ENST00000536196 N4BP2Q86UW6 1770 aaPredicted RBP28.05■■■□□ 2.08
CHFR-212ENST00000536196 DLG5Q8TDM6 1919 aa28.04■■■□□ 2.08
CHFR-212ENST00000536196 SOS1Q07889 1333 aaPredicted RBP28.04■■■□□ 2.08
CHFR-212ENST00000536196 ZNF790Q6PG37 636 aa28.04■■■□□ 2.08
CHFR-212ENST00000536196 SRP68Q9UHB9 627 aaKnown RBP28.04■■■□□ 2.08
CHFR-212ENST00000536196 ZNF784Q8NCA9 323 aaPredicted RBP28.03■■■□□ 2.08
CHFR-212ENST00000536196 PARP3Q9Y6F1 533 aa28.03■■■□□ 2.08
CHFR-212ENST00000536196 C10orf71Q711Q0 1435 aa28.02■■■□□ 2.08
CHFR-212ENST00000536196 RTF1Q92541 710 aaKnown RBP28.01■■■□□ 2.07
CHFR-212ENST00000536196 ZNF496Q96IT1 587 aaPredicted RBP28.01■■■□□ 2.07
CHFR-212ENST00000536196 ZBTB1Q9Y2K1 713 aa28.01■■■□□ 2.07
CHFR-212ENST00000536196 COL15A1P39059 1388 aa28■■■□□ 2.07
CHFR-212ENST00000536196 HEG1Q9ULI3 1381 aa28■■■□□ 2.07
CHFR-212ENST00000536196 ZPR1O75312 459 aa28■■■□□ 2.07
CHFR-212ENST00000536196 STARD3NLO95772 234 aa28■■■□□ 2.07
CHFR-212ENST00000536196 FKBP8Q14318 412 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 182.3 ms