RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 LY75O60449 1722 aa17.06■□□□□ 0.32
DDB1-207ENST00000535967 IGSF1Q8N6C5 1336 aa17.06■□□□□ 0.32
DDB1-207ENST00000535967 CFAP53Q96M91 514 aa17.05■□□□□ 0.32
DDB1-207ENST00000535967 KLHL34Q8N239 644 aa17.04■□□□□ 0.32
DDB1-207ENST00000535967 VIRMAQ69YN4 1812 aaKnown RBP17.04■□□□□ 0.32
DDB1-207ENST00000535967 MYBBP1AQ9BQG0 1328 aaKnown RBP17.04■□□□□ 0.32
DDB1-207ENST00000535967 FBXO3Q9UK99 471 aa17.04■□□□□ 0.32
DDB1-207ENST00000535967 PRIM1P49642 420 aaKnown RBP17.03■□□□□ 0.32
DDB1-207ENST00000535967 NLGN2Q8NFZ4 835 aa17.03■□□□□ 0.32
DDB1-207ENST00000535967 EYA1Q99502 592 aa17.03■□□□□ 0.32
DDB1-207ENST00000535967 PRKRIP1Q9H875 184 aaPredicted RBP17.03■□□□□ 0.32
DDB1-207ENST00000535967 KDRP35968 1356 aa17.02■□□□□ 0.32
DDB1-207ENST00000535967 SENP3-EIF4A1A0A087X0R7 540 aa17.02■□□□□ 0.31
DDB1-207ENST00000535967 DIAPH1O60610 1272 aaKnown RBP17.02■□□□□ 0.31
DDB1-207ENST00000535967 IL13P35225 146 aa17.02■□□□□ 0.31
DDB1-207ENST00000535967 C1QTNF8P60827 252 aa17.02■□□□□ 0.31
DDB1-207ENST00000535967 GPR162Q16538 588 aa17.02■□□□□ 0.31
DDB1-207ENST00000535967 SLC27A3Q5K4L6 730 aa17.02■□□□□ 0.31
DDB1-207ENST00000535967 SYTL4Q96C24 671 aaPredicted RBP17.02■□□□□ 0.31
DDB1-207ENST00000535967 USHBP1Q8N6Y0 703 aa17.01■□□□□ 0.31
DDB1-207ENST00000535967 RAPGEF4Q8WZA2 1011 aa17.01■□□□□ 0.31
DDB1-207ENST00000535967 CEP350Q5VT06 3117 aa17■□□□□ 0.31
DDB1-207ENST00000535967 SLC16A10Q8TF71 515 aa17■□□□□ 0.31
DDB1-207ENST00000535967 TFCP2L1Q9NZI6 479 aa17■□□□□ 0.31
DDB1-207ENST00000535967 TATP17735 454 aaPredicted RBP16.99■□□□□ 0.31
DDB1-207ENST00000535967 PELP1Q8IZL8 1130 aaKnown RBP16.99■□□□□ 0.31
DDB1-207ENST00000535967 POLD1P28340 1107 aa16.97■□□□□ 0.31
DDB1-207ENST00000535967 ITGB4P16144 1822 aa16.96■□□□□ 0.31
DDB1-207ENST00000535967 ZCRB1Q8TBF4 217 aaKnown RBP16.96■□□□□ 0.31
DDB1-207ENST00000535967 NUDCQ9Y266 331 aa16.96■□□□□ 0.31
DDB1-207ENST00000535967 TOGARAM1Q9Y4F4 1720 aa16.96■□□□□ 0.31
DDB1-207ENST00000535967 ANP32CO43423 234 aa16.96■□□□□ 0.3
DDB1-207ENST00000535967 YBX3P16989 372 aaKnown RBP eCLIP16.96■□□□□ 0.38e-12■□□□□ 9.5
DDB1-207ENST00000535967 COL23A1Q86Y22 540 aaPredicted RBP16.96■□□□□ 0.3
DDB1-207ENST00000535967 CCNL1Q9UK58 526 aaPredicted RBP16.96■□□□□ 0.3
DDB1-207ENST00000535967 PCDH11XQ9BZA7 1347 aa16.95■□□□□ 0.3
DDB1-207ENST00000535967 PCDH11YQ9BZA8 1340 aa16.95■□□□□ 0.3
DDB1-207ENST00000535967 SCN11AQ9UI33 1791 aa16.95■□□□□ 0.3
DDB1-207ENST00000535967 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.95■□□□□ 0.3
DDB1-207ENST00000535967 TAF1LQ8IZX4 1826 aa16.95■□□□□ 0.3
DDB1-207ENST00000535967 C5P01031 1676 aa16.95■□□□□ 0.3
DDB1-207ENST00000535967 MSL1Q68DK7 614 aa16.94■□□□□ 0.3
DDB1-207ENST00000535967 SULT6B1Q6IMI4 303 aa16.94■□□□□ 0.3
DDB1-207ENST00000535967 SPG7Q9UQ90 795 aa16.93■□□□□ 0.3
DDB1-207ENST00000535967 DLG5Q8TDM6 1919 aa16.93■□□□□ 0.3
DDB1-207ENST00000535967 ADAMTS7Q9UKP4 1686 aa16.92■□□□□ 0.3
DDB1-207ENST00000535967 U2SURPO15042 1029 aaKnown RBP16.92■□□□□ 0.3
DDB1-207ENST00000535967 AEBP1Q8IUX7 1158 aa16.92■□□□□ 0.3
DDB1-207ENST00000535967 GIGYF1O75420 1035 aaPredicted RBP16.91■□□□□ 0.3
DDB1-207ENST00000535967 VASPP50552 380 aaPredicted RBP16.91■□□□□ 0.3
DDB1-207ENST00000535967 HMOX1P09601 288 aa16.9■□□□□ 0.3
DDB1-207ENST00000535967 PRR29P0C7W0 189 aa16.9■□□□□ 0.3
DDB1-207ENST00000535967 AMOTQ4VCS5 1084 aa16.9■□□□□ 0.3
DDB1-207ENST00000535967 AMIGO3Q86WK7 504 aa16.89■□□□□ 0.29
DDB1-207ENST00000535967 U2AF1L5P0DN76 240 aaPredicted RBP16.88■□□□□ 0.29
DDB1-207ENST00000535967 U2AF1Q01081 240 aaKnown RBP eCLIP16.88■□□□□ 0.292e-7■■□□□ 11.4
DDB1-207ENST00000535967 PLEKHO1Q53GL0 409 aaPredicted RBP16.88■□□□□ 0.29
DDB1-207ENST00000535967 SMIM5Q71RC9 77 aa16.87■□□□□ 0.29
DDB1-207ENST00000535967 RSPH6AQ9H0K4 717 aa16.87■□□□□ 0.29
DDB1-207ENST00000535967 PALLDQ8WX93 1383 aa16.87■□□□□ 0.29
DDB1-207ENST00000535967 FCHSD2O94868 740 aa16.87■□□□□ 0.29
DDB1-207ENST00000535967 UBR3Q6ZT12 1888 aa16.87■□□□□ 0.29
DDB1-207ENST00000535967 SIPA1L3O60292 1781 aaPredicted RBP16.86■□□□□ 0.29
DDB1-207ENST00000535967 C4BP0C0L5 1744 aa16.86■□□□□ 0.29
DDB1-207ENST00000535967 CYP27B1O15528 508 aa16.86■□□□□ 0.29
DDB1-207ENST00000535967 IFNL2Q8IZJ0 200 aa16.86■□□□□ 0.29
DDB1-207ENST00000535967 ATP10DQ9P241 1426 aa16.85■□□□□ 0.29
DDB1-207ENST00000535967 PHKG2P15735 406 aa16.85■□□□□ 0.29
DDB1-207ENST00000535967 NKX1-1Q15270 411 aaPredicted RBP16.85■□□□□ 0.29
DDB1-207ENST00000535967 ZNF530Q6P9A1 599 aaPredicted RBP16.85■□□□□ 0.29
DDB1-207ENST00000535967 PNNQ9H307 717 aaKnown RBP16.85■□□□□ 0.29
DDB1-207ENST00000535967 GRIN3BO60391 1043 aa16.84■□□□□ 0.29
DDB1-207ENST00000535967 PRKAR2BP31323 418 aa16.84■□□□□ 0.29
DDB1-207ENST00000535967 WDR43Q15061 677 aaKnown RBP eCLIP16.84■□□□□ 0.29
DDB1-207ENST00000535967 MPRIPQ6WCQ1 1025 aa16.84■□□□□ 0.29
DDB1-207ENST00000535967 MRC1P22897 1456 aa16.84■□□□□ 0.29
DDB1-207ENST00000535967 HSP90AB1P08238 724 aaKnown RBP16.83■□□□□ 0.28
DDB1-207ENST00000535967 C1orf141Q5JVX7 400 aa16.83■□□□□ 0.28
DDB1-207ENST00000535967 KDM6AO15550 1401 aaPredicted RBP16.83■□□□□ 0.28
DDB1-207ENST00000535967 NEFMP07197 916 aa16.82■□□□□ 0.28
DDB1-207ENST00000535967 GAS2L2Q8NHY3 880 aa16.82■□□□□ 0.28
DDB1-207ENST00000535967 WWC3Q9ULE0 1092 aa16.82■□□□□ 0.28
DDB1-207ENST00000535967 AKAP4Q5JQC9 854 aa16.81■□□□□ 0.28
DDB1-207ENST00000535967 CD2APQ9Y5K6 639 aa16.81■□□□□ 0.28
DDB1-207ENST00000535967 ADCY9O60503 1353 aa16.81■□□□□ 0.28
DDB1-207ENST00000535967 DCAF5Q96JK2 942 aa16.8■□□□□ 0.28
DDB1-207ENST00000535967 ZNF831Q5JPB2 1677 aa16.8■□□□□ 0.28
DDB1-207ENST00000535967 PHF14O94880 888 aa16.79■□□□□ 0.28
DDB1-207ENST00000535967 MTHFSDQ2M296 383 aaKnown RBP16.79■□□□□ 0.28
DDB1-207ENST00000535967 DIEXFQ68CQ4 756 aaKnown RBP16.79■□□□□ 0.28
DDB1-207ENST00000535967 PIGBQ92521 554 aa16.79■□□□□ 0.28
DDB1-207ENST00000535967 MRS2Q9HD23 443 aa16.79■□□□□ 0.28
DDB1-207ENST00000535967 MAPK8IP3Q9UPT6 1336 aa16.79■□□□□ 0.28
DDB1-207ENST00000535967 CICQ96RK0 1608 aaPredicted RBP16.79■□□□□ 0.28
DDB1-207ENST00000535967 PLEKHF1Q96S99 279 aa16.79■□□□□ 0.28
DDB1-207ENST00000535967 UBR2Q8IWV8 1755 aa16.78■□□□□ 0.28
DDB1-207ENST00000535967 MIER1Q8N108 512 aa16.78■□□□□ 0.28
DDB1-207ENST00000535967 FLAD1Q8NFF5 587 aa16.78■□□□□ 0.28
DDB1-207ENST00000535967 ZNF526Q8TF50 670 aaPredicted RBP16.78■□□□□ 0.28
DDB1-207ENST00000535967 AK7Q96M32 723 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms