RNA–Protein interactions for RNA: ENST00000535835.5

SPARCL1-208, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-208ENST00000535835 PHTF2Q8N3S3 785 aa6.75□□□□□ -1.33
SPARCL1-208ENST00000535835 GAS2L1Q99501 681 aaPredicted RBP6.75□□□□□ -1.33
SPARCL1-208ENST00000535835 FHDC1Q9C0D6 1143 aaPredicted RBP6.75□□□□□ -1.33
SPARCL1-208ENST00000535835 WASLO00401 505 aaPredicted RBP6.74□□□□□ -1.33
SPARCL1-208ENST00000535835 GNRH1P01148 92 aa6.74□□□□□ -1.33
SPARCL1-208ENST00000535835 CENPCQ03188 943 aa6.74□□□□□ -1.33
SPARCL1-208ENST00000535835 IRF5Q13568 498 aa6.74□□□□□ -1.33
SPARCL1-208ENST00000535835 UBAP2LQ14157 1087 aaKnown RBP6.74□□□□□ -1.33
SPARCL1-208ENST00000535835 FOXR1Q6PIV2 292 aa6.74□□□□□ -1.33
SPARCL1-208ENST00000535835 ESYT1Q9BSJ8 1104 aa6.74□□□□□ -1.33
SPARCL1-208ENST00000535835 TBC1D2BQ9UPU7 963 aa6.74□□□□□ -1.33
SPARCL1-208ENST00000535835 F11P03951 625 aa6.73□□□□□ -1.33
SPARCL1-208ENST00000535835 TAS1R3Q7RTX0 852 aa6.73□□□□□ -1.33
SPARCL1-208ENST00000535835 CNKSR1Q969H4 720 aa6.73□□□□□ -1.33
SPARCL1-208ENST00000535835 XAGE2Q96GT9 111 aa6.73□□□□□ -1.33
SPARCL1-208ENST00000535835 TIMMDC1Q9NPL8 285 aa6.73□□□□□ -1.33
SPARCL1-208ENST00000535835 H7C1W4 665 aa6.72□□□□□ -1.33
SPARCL1-208ENST00000535835 STAU1O95793 577 aaKnown RBP6.72□□□□□ -1.33
SPARCL1-208ENST00000535835 LCE3BQ5TA77 95 aa6.72□□□□□ -1.33
SPARCL1-208ENST00000535835 ZNF592Q92610 1267 aa6.72□□□□□ -1.33
SPARCL1-208ENST00000535835 CHIC2Q9UKJ5 165 aa6.72□□□□□ -1.33
SPARCL1-208ENST00000535835 ZNF330Q9Y3S2 320 aaPredicted RBP6.72□□□□□ -1.33
SPARCL1-208ENST00000535835 KRBA1A5PL33 1030 aa6.71□□□□□ -1.34
SPARCL1-208ENST00000535835 ALYREFQ86V81 257 aaKnown RBP6.71□□□□□ -1.34
SPARCL1-208ENST00000535835 NUCKS1Q9H1E3 243 aaKnown RBP6.71□□□□□ -1.34
SPARCL1-208ENST00000535835 LRRC4BQ9NT99 713 aa6.71□□□□□ -1.34
SPARCL1-208ENST00000535835 MX2P20592 715 aa6.69□□□□□ -1.34
SPARCL1-208ENST00000535835 PHKA2P46019 1235 aa6.69□□□□□ -1.34
SPARCL1-208ENST00000535835 C4orf17Q53FE4 359 aa6.69□□□□□ -1.34
SPARCL1-208ENST00000535835 C1orf229Q6ZS94 237 aaPredicted RBP6.69□□□□□ -1.34
SPARCL1-208ENST00000535835 ETNK1Q9HBU6 452 aa6.69□□□□□ -1.34
SPARCL1-208ENST00000535835 GPAMQ9HCL2 828 aa6.69□□□□□ -1.34
SPARCL1-208ENST00000535835 TRERF1Q96PN7 1200 aa6.68□□□□□ -1.34
SPARCL1-208ENST00000535835 ZSCAN10Q96SZ4 725 aaPredicted RBP6.68□□□□□ -1.34
SPARCL1-208ENST00000535835 CFHR5Q9BXR6 569 aa6.68□□□□□ -1.34
SPARCL1-208ENST00000535835 A0A1B0GTH6 734 aa6.67□□□□□ -1.34
SPARCL1-208ENST00000535835 SHISA8B8ZZ34 492 aa6.67□□□□□ -1.34
SPARCL1-208ENST00000535835 APBB1O00213 710 aa6.67□□□□□ -1.34
SPARCL1-208ENST00000535835 OIP5O43482 229 aa6.67□□□□□ -1.34
SPARCL1-208ENST00000535835 MYCP01106 439 aaPredicted RBP6.67□□□□□ -1.34
SPARCL1-208ENST00000535835 NDFIP2Q9NV92 336 aa6.67□□□□□ -1.34
SPARCL1-208ENST00000535835 MKL2Q9ULH7 1088 aa6.67□□□□□ -1.34
SPARCL1-208ENST00000535835 NSFL1CQ9UNZ2 370 aaKnown RBP6.67□□□□□ -1.34
SPARCL1-208ENST00000535835 BTBD11A6QL63 1104 aa6.66□□□□□ -1.34
SPARCL1-208ENST00000535835 C2CD2LO14523 706 aa6.66□□□□□ -1.34
SPARCL1-208ENST00000535835 MSX1P28360 303 aa6.66□□□□□ -1.34
SPARCL1-208ENST00000535835 SCNN1DP51172 638 aa6.66□□□□□ -1.34
SPARCL1-208ENST00000535835 PPARGC1BQ86YN6 1023 aaKnown RBP6.66□□□□□ -1.34
SPARCL1-208ENST00000535835 KLRG1Q96E93 195 aa6.66□□□□□ -1.34
SPARCL1-208ENST00000535835 HCN2Q9UL51 889 aa6.66□□□□□ -1.34
SPARCL1-208ENST00000535835 DOLKQ9UPQ8 538 aa6.66□□□□□ -1.34
SPARCL1-208ENST00000535835 HOXB4P17483 251 aaPredicted RBP6.65□□□□□ -1.34
SPARCL1-208ENST00000535835 SNRPNP63162 240 aaKnown RBP6.65□□□□□ -1.34
SPARCL1-208ENST00000535835 VAC14Q08AM6 782 aa6.65□□□□□ -1.34
SPARCL1-208ENST00000535835 ZNF295-AS1Q8N0V1 137 aa6.65□□□□□ -1.34
SPARCL1-208ENST00000535835 OXCT2Q9BYC2 517 aaPredicted RBP6.65□□□□□ -1.34
SPARCL1-208ENST00000535835 ESF1Q9H501 851 aaKnown RBP6.65□□□□□ -1.34
SPARCL1-208ENST00000535835 RUBCNLQ9H714 662 aa6.65□□□□□ -1.34
SPARCL1-208ENST00000535835 MAP2K3P46734 347 aa6.64□□□□□ -1.35
SPARCL1-208ENST00000535835 EIF4G2P78344 907 aaKnown RBP eCLIP6.64□□□□□ -1.35
SPARCL1-208ENST00000535835 LBRQ14739 615 aaKnown RBP6.64□□□□□ -1.35
SPARCL1-208ENST00000535835 DNAAF2Q9NVR5 837 aaKnown RBP6.64□□□□□ -1.35
SPARCL1-208ENST00000535835 BNIP3LO60238 219 aa6.63□□□□□ -1.35
SPARCL1-208ENST00000535835 USP4Q13107 963 aa6.63□□□□□ -1.35
SPARCL1-208ENST00000535835 TPRNQ4KMQ1 711 aa6.63□□□□□ -1.35
SPARCL1-208ENST00000535835 ESCO1Q5FWF5 840 aa6.63□□□□□ -1.35
SPARCL1-208ENST00000535835 GNASQ5JWF2 1037 aa6.63□□□□□ -1.35
SPARCL1-208ENST00000535835 ZMYM1Q5SVZ6 1142 aa6.63□□□□□ -1.35
SPARCL1-208ENST00000535835 TMEM214Q6NUQ4 689 aaKnown RBP6.63□□□□□ -1.35
SPARCL1-208ENST00000535835 RNF135Q8IUD6 432 aa6.63□□□□□ -1.35
SPARCL1-208ENST00000535835 RHBDD1Q8TEB9 315 aa6.63□□□□□ -1.35
SPARCL1-208ENST00000535835 ABHD17AQ96GS6 310 aa6.63□□□□□ -1.35
SPARCL1-208ENST00000535835 KRTAP4-12Q9BQ66 201 aa6.63□□□□□ -1.35
SPARCL1-208ENST00000535835 CRISPLD1Q9H336 500 aa6.63□□□□□ -1.35
SPARCL1-208ENST00000535835 GDPD2Q9HCC8 539 aa6.63□□□□□ -1.35
SPARCL1-208ENST00000535835 ATP4AP20648 1035 aa6.62□□□□□ -1.35
SPARCL1-208ENST00000535835 TLR1Q15399 786 aa6.62□□□□□ -1.35
SPARCL1-208ENST00000535835 SLFNL1Q499Z3 407 aa6.62□□□□□ -1.35
SPARCL1-208ENST00000535835 OXLD1Q5BKU9 147 aa6.62□□□□□ -1.35
SPARCL1-208ENST00000535835 SEMA6BQ9H3T3 888 aa6.62□□□□□ -1.35
SPARCL1-208ENST00000535835 RRAGCQ9HB90 399 aa6.62□□□□□ -1.35
SPARCL1-208ENST00000535835 INHAP05111 366 aa6.61□□□□□ -1.35
SPARCL1-208ENST00000535835 COL8A1P27658 744 aa6.61□□□□□ -1.35
SPARCL1-208ENST00000535835 GDF10P55107 478 aa6.61□□□□□ -1.35
SPARCL1-208ENST00000535835 CTBSQ01459 385 aa6.61□□□□□ -1.35
SPARCL1-208ENST00000535835 ATXN7L1Q9ULK2 861 aaPredicted RBP6.61□□□□□ -1.35
SPARCL1-208ENST00000535835 USP3Q9Y6I4 520 aa6.61□□□□□ -1.35
SPARCL1-208ENST00000535835 TMEM229AB2RXF0 380 aa6.6□□□□□ -1.35
SPARCL1-208ENST00000535835 GRIN2CQ14957 1233 aa6.6□□□□□ -1.35
SPARCL1-208ENST00000535835 PLPP7Q8NBV4 271 aa6.6□□□□□ -1.35
SPARCL1-208ENST00000535835 IQSEC3Q9UPP2 1182 aaPredicted RBP6.6□□□□□ -1.35
SPARCL1-208ENST00000535835 PHF24Q9UPV7 400 aa6.6□□□□□ -1.35
SPARCL1-208ENST00000535835 C1QTNF9BB2RNN3 333 aa6.59□□□□□ -1.35
SPARCL1-208ENST00000535835 PIK3CDO00329 1044 aa6.59□□□□□ -1.35
SPARCL1-208ENST00000535835 FGFR3P22607 806 aa6.59□□□□□ -1.35
SPARCL1-208ENST00000535835 ABL2P42684 1182 aa6.59□□□□□ -1.35
SPARCL1-208ENST00000535835 PLA2G4AP47712 749 aa6.59□□□□□ -1.35
SPARCL1-208ENST00000535835 LINC00114Q6XXX2 140 aa6.59□□□□□ -1.35
SPARCL1-208ENST00000535835 EDARADDQ8WWZ3 215 aa6.59□□□□□ -1.35
SPARCL1-208ENST00000535835 SCO2A0A1W2PP80 73 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms