RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 SLC4A9Q96Q91 983 aa22.12■■□□□ 1.13
ATL3-202ENST00000535789 MTFR1LQ9H019 292 aa22.12■■□□□ 1.13
ATL3-202ENST00000535789 HSP90AB1P08238 724 aaKnown RBP22.11■■□□□ 1.13
ATL3-202ENST00000535789 ITPK1Q13572 414 aa22.11■■□□□ 1.13
ATL3-202ENST00000535789 MTHFSDQ2M296 383 aaKnown RBP22.11■■□□□ 1.13
ATL3-202ENST00000535789 LINC00116Q8NCU8 138 aa22.11■■□□□ 1.13
ATL3-202ENST00000535789 KCPQ6ZWJ8 1503 aa22.11■■□□□ 1.13
ATL3-202ENST00000535789 LOC102724428A0A0B4J2F2 783 aa22.1■■□□□ 1.13
ATL3-202ENST00000535789 SIK1P57059 783 aa22.1■■□□□ 1.13
ATL3-202ENST00000535789 C1orf141Q5JVX7 400 aa22.1■■□□□ 1.13
ATL3-202ENST00000535789 U2SURPO15042 1029 aaKnown RBP22.09■■□□□ 1.13
ATL3-202ENST00000535789 AKAP4Q5JQC9 854 aa22.09■■□□□ 1.13
ATL3-202ENST00000535789 TFCP2L1Q9NZI6 479 aa22.09■■□□□ 1.13
ATL3-202ENST00000535789 UTRNP46939 3433 aa22.08■■□□□ 1.13
ATL3-202ENST00000535789 SMIM5Q71RC9 77 aa22.08■■□□□ 1.13
ATL3-202ENST00000535789 COL23A1Q86Y22 540 aaPredicted RBP22.08■■□□□ 1.13
ATL3-202ENST00000535789 LGR6Q9HBX8 967 aa22.08■■□□□ 1.13
ATL3-202ENST00000535789 RSPH6AQ9H0K4 717 aa22.07■■□□□ 1.12
ATL3-202ENST00000535789 GOLGB1Q14789 3259 aaKnown RBP22.07■■□□□ 1.12
ATL3-202ENST00000535789 CABP4P57796 275 aa22.05■■□□□ 1.12
ATL3-202ENST00000535789 NFATC2IPQ8NCF5 419 aa22.05■■□□□ 1.12
ATL3-202ENST00000535789 RNMTO43148 476 aaKnown RBP22.04■■□□□ 1.12
ATL3-202ENST00000535789 PPP1R1BQ9UD71 204 aaPredicted RBP22.04■■□□□ 1.12
ATL3-202ENST00000535789 MAP3K5Q99683 1374 aa22.03■■□□□ 1.12
ATL3-202ENST00000535789 ATP6V1AP38606 617 aa22.03■■□□□ 1.12
ATL3-202ENST00000535789 DDX10Q13206 875 aaKnown RBP22.03■■□□□ 1.12
ATL3-202ENST00000535789 PHACTR3Q96KR7 559 aa22.03■■□□□ 1.12
ATL3-202ENST00000535789 CFAP53Q96M91 514 aa22.03■■□□□ 1.12
ATL3-202ENST00000535789 PRKAR2BP31323 418 aa22.02■■□□□ 1.12
ATL3-202ENST00000535789 SLC16A10Q8TF71 515 aa22.02■■□□□ 1.12
ATL3-202ENST00000535789 SLC52A2Q9HAB3 445 aa22.02■■□□□ 1.12
ATL3-202ENST00000535789 AK7Q96M32 723 aa22■■□□□ 1.11
ATL3-202ENST00000535789 RBM42Q9BTD8 480 aaKnown RBP22■■□□□ 1.11
ATL3-202ENST00000535789 FHDC1Q9C0D6 1143 aaPredicted RBP22■■□□□ 1.11
ATL3-202ENST00000535789 KIAA1551Q9HCM1 1747 aa22■■□□□ 1.11
ATL3-202ENST00000535789 KIF13BQ9NQT8 1826 aa21.99■■□□□ 1.11
ATL3-202ENST00000535789 KDM3BQ7LBC6 1761 aa21.98■■□□□ 1.11
ATL3-202ENST00000535789 PHF14O94880 888 aa21.98■■□□□ 1.11
ATL3-202ENST00000535789 MSL1Q68DK7 614 aa21.98■■□□□ 1.11
ATL3-202ENST00000535789 CEMIPQ8WUJ3 1361 aa21.98■■□□□ 1.11
ATL3-202ENST00000535789 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.97■■□□□ 1.11
ATL3-202ENST00000535789 PTCD1O75127 700 aaKnown RBP21.97■■□□□ 1.11
ATL3-202ENST00000535789 U2AF1L5P0DN76 240 aaPredicted RBP21.97■■□□□ 1.11
ATL3-202ENST00000535789 U2AF1Q01081 240 aaKnown RBP eCLIP21.97■■□□□ 1.11
ATL3-202ENST00000535789 SLC39A6Q13433 755 aa21.97■■□□□ 1.11
ATL3-202ENST00000535789 IL17REQ8NFR9 667 aa21.97■■□□□ 1.11
ATL3-202ENST00000535789 ARXQ96QS3 562 aa21.97■■□□□ 1.11
ATL3-202ENST00000535789 GNPATO15228 680 aa21.96■■□□□ 1.11
ATL3-202ENST00000535789 GAS2L2Q8NHY3 880 aa21.96■■□□□ 1.11
ATL3-202ENST00000535789 CNTNAP4Q9C0A0 1308 aa21.96■■□□□ 1.11
ATL3-202ENST00000535789 MSH5O43196 834 aa21.95■■□□□ 1.1
ATL3-202ENST00000535789 SSFA2P28290 1259 aa21.95■■□□□ 1.1
ATL3-202ENST00000535789 SYT17Q9BSW7 474 aa21.95■■□□□ 1.1
ATL3-202ENST00000535789 CHD4Q14839 1912 aa21.94■■□□□ 1.1
ATL3-202ENST00000535789 NUDCQ9Y266 331 aa21.94■■□□□ 1.1
ATL3-202ENST00000535789 LAMB4A4D0S4 1761 aa21.93■■□□□ 1.1
ATL3-202ENST00000535789 GNAT3A8MTJ3 354 aa21.93■■□□□ 1.1
ATL3-202ENST00000535789 FCHSD2O94868 740 aa21.92■■□□□ 1.1
ATL3-202ENST00000535789 FLAD1Q8NFF5 587 aa21.92■■□□□ 1.1
ATL3-202ENST00000535789 RALBP1Q15311 655 aa21.91■■□□□ 1.1
ATL3-202ENST00000535789 SCN7AQ01118 1682 aa21.91■■□□□ 1.1
ATL3-202ENST00000535789 BRCA1P38398 1863 aaKnown RBP21.9■■□□□ 1.1
ATL3-202ENST00000535789 AFDNP55196 1824 aaKnown RBP21.9■■□□□ 1.1
ATL3-202ENST00000535789 N4BP2Q86UW6 1770 aaPredicted RBP21.9■■□□□ 1.1
ATL3-202ENST00000535789 POLD1P28340 1107 aa21.9■■□□□ 1.1
ATL3-202ENST00000535789 CRKLP46109 303 aaKnown RBP21.9■■□□□ 1.1
ATL3-202ENST00000535789 RC3H1Q5TC82 1133 aaKnown RBP21.9■■□□□ 1.1
ATL3-202ENST00000535789 DNAJC10Q8IXB1 793 aa21.9■■□□□ 1.1
ATL3-202ENST00000535789 PLEKHF1Q96S99 279 aa21.9■■□□□ 1.1
ATL3-202ENST00000535789 HMGB2P26583 209 aaKnown RBP21.89■■□□□ 1.09
ATL3-202ENST00000535789 BCORQ6W2J9 1755 aa21.89■■□□□ 1.09
ATL3-202ENST00000535789 MYBBP1AQ9BQG0 1328 aaKnown RBP21.88■■□□□ 1.09
ATL3-202ENST00000535789 NLGN2Q8NFZ4 835 aa21.88■■□□□ 1.09
ATL3-202ENST00000535789 RPS6KA4O75676 772 aa21.87■■□□□ 1.09
ATL3-202ENST00000535789 INTS5Q6P9B9 1019 aaKnown RBP21.87■■□□□ 1.09
ATL3-202ENST00000535789 DCTN1Q14203 1278 aa21.86■■□□□ 1.09
ATL3-202ENST00000535789 MCM10Q7L590 875 aa21.86■■□□□ 1.09
ATL3-202ENST00000535789 ARHGEF1Q92888 912 aaKnown RBP21.86■■□□□ 1.09
ATL3-202ENST00000535789 RTCBQ9Y3I0 505 aaKnown RBP21.86■■□□□ 1.09
ATL3-202ENST00000535789 ZNF316A6NFI3 1004 aaPredicted RBP21.85■■□□□ 1.09
ATL3-202ENST00000535789 KCNQ3O43525 872 aa21.85■■□□□ 1.09
ATL3-202ENST00000535789 CYP19A1P11511 503 aaPredicted RBP21.85■■□□□ 1.09
ATL3-202ENST00000535789 NRXN2Q9P2S2 1712 aa21.85■■□□□ 1.09
ATL3-202ENST00000535789 TEFQ10587 303 aa21.84■■□□□ 1.09
ATL3-202ENST00000535789 KLHL34Q8N239 644 aa21.84■■□□□ 1.09
ATL3-202ENST00000535789 ZNF496Q96IT1 587 aaPredicted RBP21.84■■□□□ 1.09
ATL3-202ENST00000535789 HEG1Q9ULI3 1381 aa21.84■■□□□ 1.09
ATL3-202ENST00000535789 ADRA2BP18089 450 aa21.83■■□□□ 1.09
ATL3-202ENST00000535789 ZNF790Q6PG37 636 aa21.83■■□□□ 1.09
ATL3-202ENST00000535789 PRKRIP1Q9H875 184 aaPredicted RBP21.83■■□□□ 1.09
ATL3-202ENST00000535789 SOS1Q07889 1333 aaPredicted RBP21.82■■□□□ 1.08
ATL3-202ENST00000535789 GYS1P13807 737 aa21.82■■□□□ 1.08
ATL3-202ENST00000535789 TRAPPC3LQ5T215 181 aa21.82■■□□□ 1.08
ATL3-202ENST00000535789 CCDC87Q9NVE4 849 aa21.82■■□□□ 1.08
ATL3-202ENST00000535789 ZBTB1Q9Y2K1 713 aa21.82■■□□□ 1.08
ATL3-202ENST00000535789 VSIG10Q8N0Z9 540 aa21.81■■□□□ 1.08
ATL3-202ENST00000535789 SRP68Q9UHB9 627 aaKnown RBP21.81■■□□□ 1.08
ATL3-202ENST00000535789 USP42Q9H9J4 1324 aaKnown RBP21.8■■□□□ 1.08
ATL3-202ENST00000535789 C10orf71Q711Q0 1435 aa21.8■■□□□ 1.08
ATL3-202ENST00000535789 COL15A1P39059 1388 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms