RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 PLEKHO1Q53GL0 409 aaPredicted RBP28.19■■■□□ 2.1
LTBR-205ENST00000535739 ERVV-2B6SEH9 535 aa28.18■■■□□ 2.1
LTBR-205ENST00000535739 GNPATO15228 680 aa28.18■■■□□ 2.1
LTBR-205ENST00000535739 GRIN3BO60391 1043 aa28.18■■■□□ 2.1
LTBR-205ENST00000535739 KNSTRNQ9Y448 316 aa28.18■■■□□ 2.1
LTBR-205ENST00000535739 ZNF530Q6P9A1 599 aaPredicted RBP28.17■■■□□ 2.1
LTBR-205ENST00000535739 AEBP1Q8IUX7 1158 aa28.17■■■□□ 2.1
LTBR-205ENST00000535739 DCAF5Q96JK2 942 aa28.17■■■□□ 2.1
LTBR-205ENST00000535739 HSP90AB1P08238 724 aaKnown RBP28.16■■■□□ 2.1
LTBR-205ENST00000535739 KDRP35968 1356 aa28.15■■■□□ 2.1
LTBR-205ENST00000535739 SLC4A9Q96Q91 983 aa28.15■■■□□ 2.1
LTBR-205ENST00000535739 KDM6AO15550 1401 aaPredicted RBP28.15■■■□□ 2.1
LTBR-205ENST00000535739 AMOTQ4VCS5 1084 aa28.14■■■□□ 2.1
LTBR-205ENST00000535739 RBM42Q9BTD8 480 aaKnown RBP28.14■■■□□ 2.1
LTBR-205ENST00000535739 ZNF831Q5JPB2 1677 aa28.12■■■□□ 2.09
LTBR-205ENST00000535739 CABP4P57796 275 aa28.11■■■□□ 2.09
LTBR-205ENST00000535739 SULT6B1Q6IMI4 303 aa28.11■■■□□ 2.09
LTBR-205ENST00000535739 COL5A3P25940 1745 aaPredicted RBP28.11■■■□□ 2.09
LTBR-205ENST00000535739 IL13P35225 146 aa28.1■■■□□ 2.09
LTBR-205ENST00000535739 AMER1Q5JTC6 1135 aaPredicted RBP28.1■■■□□ 2.09
LTBR-205ENST00000535739 MTHFSP49914 203 aa28.09■■■□□ 2.09
LTBR-205ENST00000535739 C1QTNF8P60827 252 aa28.09■■■□□ 2.09
LTBR-205ENST00000535739 C1orf141Q5JVX7 400 aa28.09■■■□□ 2.09
LTBR-205ENST00000535739 MYH14Q7Z406 1995 aaKnown RBP28.09■■■□□ 2.09
LTBR-205ENST00000535739 KIF7Q2M1P5 1343 aa28.09■■■□□ 2.09
LTBR-205ENST00000535739 WWC3Q9ULE0 1092 aa28.08■■■□□ 2.09
LTBR-205ENST00000535739 RTCBQ9Y3I0 505 aaKnown RBP28.08■■■□□ 2.09
LTBR-205ENST00000535739 TRAPPC3LQ5T215 181 aa28.07■■■□□ 2.08
LTBR-205ENST00000535739 MMP10P09238 476 aa28.05■■■□□ 2.08
LTBR-205ENST00000535739 RC3H1Q5TC82 1133 aaKnown RBP28.05■■■□□ 2.08
LTBR-205ENST00000535739 SCN11AQ9UI33 1791 aa28.05■■■□□ 2.08
LTBR-205ENST00000535739 GIGYF1O75420 1035 aaPredicted RBP28.04■■■□□ 2.08
LTBR-205ENST00000535739 NFATC2IPQ8NCF5 419 aa28.04■■■□□ 2.08
LTBR-205ENST00000535739 CNTNAP4Q9C0A0 1308 aa28.03■■■□□ 2.08
LTBR-205ENST00000535739 PTCD1O75127 700 aaKnown RBP28.03■■■□□ 2.08
LTBR-205ENST00000535739 ARHGEF1Q92888 912 aaKnown RBP28.03■■■□□ 2.08
LTBR-205ENST00000535739 SENP3-EIF4A1A0A087X0R7 540 aa28.01■■■□□ 2.07
LTBR-205ENST00000535739 RPS6KA4O75676 772 aa28.01■■■□□ 2.07
LTBR-205ENST00000535739 VIRMAQ69YN4 1812 aaKnown RBP28.01■■■□□ 2.07
LTBR-205ENST00000535739 KIF13BQ9NQT8 1826 aa28.01■■■□□ 2.07
LTBR-205ENST00000535739 ADRA2BP18089 450 aa28■■■□□ 2.07
LTBR-205ENST00000535739 C4AP0C0L4 1744 aa28■■■□□ 2.07
LTBR-205ENST00000535739 CICQ96RK0 1608 aaPredicted RBP28■■■□□ 2.07
LTBR-205ENST00000535739 NLGN1Q8N2Q7 840 aa27.99■■■□□ 2.07
LTBR-205ENST00000535739 ATP10DQ9P241 1426 aa27.99■■■□□ 2.07
LTBR-205ENST00000535739 N4BP2Q86UW6 1770 aaPredicted RBP27.99■■■□□ 2.07
LTBR-205ENST00000535739 PER1O15534 1290 aaPredicted RBP27.98■■■□□ 2.07
LTBR-205ENST00000535739 RFC4P35249 363 aa27.98■■■□□ 2.07
LTBR-205ENST00000535739 TJP1Q07157 1748 aa27.98■■■□□ 2.07
LTBR-205ENST00000535739 HMOX1P09601 288 aa27.97■■■□□ 2.07
LTBR-205ENST00000535739 GYS1P13807 737 aa27.97■■■□□ 2.07
LTBR-205ENST00000535739 AKAP4Q5JQC9 854 aa27.97■■■□□ 2.07
LTBR-205ENST00000535739 CC2D1BQ5T0F9 858 aaKnown RBP27.97■■■□□ 2.07
LTBR-205ENST00000535739 KIAA1551Q9HCM1 1747 aa27.97■■■□□ 2.07
LTBR-205ENST00000535739 CRKLP46109 303 aaKnown RBP27.95■■■□□ 2.06
LTBR-205ENST00000535739 LGR6Q9HBX8 967 aa27.95■■■□□ 2.06
LTBR-205ENST00000535739 PXDNLA1KZ92 1463 aa27.95■■■□□ 2.06
LTBR-205ENST00000535739 ADCY9O60503 1353 aa27.93■■■□□ 2.06
LTBR-205ENST00000535739 SLC52A2Q9HAB3 445 aa27.92■■■□□ 2.06
LTBR-205ENST00000535739 C10orf71Q711Q0 1435 aa27.92■■■□□ 2.06
LTBR-205ENST00000535739 A0A0G2JLW4 131 aa27.91■■■□□ 2.06
LTBR-205ENST00000535739 RNMTO43148 476 aaKnown RBP27.9■■■□□ 2.06
LTBR-205ENST00000535739 DIAPH1O60610 1272 aaKnown RBP27.9■■■□□ 2.06
LTBR-205ENST00000535739 TGFB2P61812 414 aa27.9■■■□□ 2.06
LTBR-205ENST00000535739 ZNF526Q8TF50 670 aaPredicted RBP27.9■■■□□ 2.06
LTBR-205ENST00000535739 GPBP1L1Q9HC44 474 aaPredicted RBP27.9■■■□□ 2.06
LTBR-205ENST00000535739 CCDC87Q9NVE4 849 aa27.9■■■□□ 2.06
LTBR-205ENST00000535739 SRP68Q9UHB9 627 aaKnown RBP27.9■■■□□ 2.06
LTBR-205ENST00000535739 PARP3Q9Y6F1 533 aa27.9■■■□□ 2.06
LTBR-205ENST00000535739 CEP350Q5VT06 3117 aa27.9■■■□□ 2.06
LTBR-205ENST00000535739 CNGB1Q14028 1251 aaPredicted RBP27.89■■■□□ 2.06
LTBR-205ENST00000535739 SLC39A6Q13433 755 aa27.88■■■□□ 2.05
LTBR-205ENST00000535739 MTHFSDQ2M296 383 aaKnown RBP27.88■■■□□ 2.05
LTBR-205ENST00000535739 INTS5Q6P9B9 1019 aaKnown RBP27.88■■■□□ 2.05
LTBR-205ENST00000535739 DNAJC10Q8IXB1 793 aa27.88■■■□□ 2.05
LTBR-205ENST00000535739 MRC1P22897 1456 aa27.88■■■□□ 2.05
LTBR-205ENST00000535739 BCS1LQ9Y276 419 aa27.87■■■□□ 2.05
LTBR-205ENST00000535739 USP42Q9H9J4 1324 aaKnown RBP27.87■■■□□ 2.05
LTBR-205ENST00000535739 BRCA1P38398 1863 aaKnown RBP27.87■■■□□ 2.05
LTBR-205ENST00000535739 DPEP1P16444 411 aa27.86■■■□□ 2.05
LTBR-205ENST00000535739 FKBP8Q14318 412 aa27.86■■■□□ 2.05
LTBR-205ENST00000535739 ADAMTS7Q9UKP4 1686 aa27.86■■■□□ 2.05
LTBR-205ENST00000535739 COL3A1P02461 1466 aaPredicted RBP27.83■■■□□ 2.04
LTBR-205ENST00000535739 KCPQ6ZWJ8 1503 aa27.82■■■□□ 2.04
LTBR-205ENST00000535739 DDR1Q08345 913 aa27.82■■■□□ 2.04
LTBR-205ENST00000535739 NPC1L1Q9UHC9 1359 aa27.82■■■□□ 2.04
LTBR-205ENST00000535739 CYP19A1P11511 503 aaPredicted RBP27.81■■■□□ 2.04
LTBR-205ENST00000535739 KCNA3P22001 575 aa27.8■■■□□ 2.04
LTBR-205ENST00000535739 SOS1Q07889 1333 aaPredicted RBP27.79■■■□□ 2.04
LTBR-205ENST00000535739 U2SURPO15042 1029 aaKnown RBP27.79■■■□□ 2.04
LTBR-205ENST00000535739 FCHSD2O94868 740 aa27.79■■■□□ 2.04
LTBR-205ENST00000535739 ARFGEF1Q9Y6D6 1849 aa27.78■■■□□ 2.04
LTBR-205ENST00000535739 ZPR1O75312 459 aa27.78■■■□□ 2.04
LTBR-205ENST00000535739 USPL1Q5W0Q7 1092 aa27.78■■■□□ 2.04
LTBR-205ENST00000535739 ARHGAP27Q6ZUM4 889 aa27.78■■■□□ 2.04
LTBR-205ENST00000535739 UBR2Q8IWV8 1755 aa27.78■■■□□ 2.04
LTBR-205ENST00000535739 POLRMTO00411 1230 aaKnown RBP27.76■■■□□ 2.03
LTBR-205ENST00000535739 TM4SF1P30408 202 aa27.76■■■□□ 2.03
LTBR-205ENST00000535739 ZBTB1Q9Y2K1 713 aa27.76■■■□□ 2.03
LTBR-205ENST00000535739 AFDNP55196 1824 aaKnown RBP27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms