RNA–Protein interactions for RNA: ENST00000535190.1

NPIPB3-207, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 631 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-207ENST00000535190 NLGN2Q8NFZ4 835 aa10.92□□□□□ -0.66
NPIPB3-207ENST00000535190 TMOD3Q9NYL9 352 aa10.92□□□□□ -0.66
NPIPB3-207ENST00000535190 KDM6AO15550 1401 aaPredicted RBP10.92□□□□□ -0.66
NPIPB3-207ENST00000535190 MTHFSP49914 203 aa10.91□□□□□ -0.66
NPIPB3-207ENST00000535190 AMOTQ4VCS5 1084 aa10.91□□□□□ -0.66
NPIPB3-207ENST00000535190 SULT6B1Q6IMI4 303 aa10.91□□□□□ -0.66
NPIPB3-207ENST00000535190 DCAF5Q96JK2 942 aa10.91□□□□□ -0.66
NPIPB3-207ENST00000535190 CHD4Q14839 1912 aa10.91□□□□□ -0.66
NPIPB3-207ENST00000535190 HSP90AB1P08238 724 aaKnown RBP10.9□□□□□ -0.66
NPIPB3-207ENST00000535190 MSL1Q68DK7 614 aa10.9□□□□□ -0.66
NPIPB3-207ENST00000535190 UTRNP46939 3433 aa10.89□□□□□ -0.67
NPIPB3-207ENST00000535190 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.89□□□□□ -0.67
NPIPB3-207ENST00000535190 SSFA2P28290 1259 aa10.89□□□□□ -0.67
NPIPB3-207ENST00000535190 ATP6V1AP38606 617 aa10.89□□□□□ -0.67
NPIPB3-207ENST00000535190 ZNF530Q6P9A1 599 aaPredicted RBP10.89□□□□□ -0.67
NPIPB3-207ENST00000535190 NPC1L1Q9UHC9 1359 aa10.89□□□□□ -0.67
NPIPB3-207ENST00000535190 ZNF831Q5JPB2 1677 aa10.89□□□□□ -0.67
NPIPB3-207ENST00000535190 MYH14Q7Z406 1995 aaKnown RBP10.88□□□□□ -0.67
NPIPB3-207ENST00000535190 RC3H1Q5TC82 1133 aaKnown RBP10.88□□□□□ -0.67
NPIPB3-207ENST00000535190 ZNF784Q8NCA9 323 aaPredicted RBP10.88□□□□□ -0.67
NPIPB3-207ENST00000535190 AK7Q96M32 723 aa10.88□□□□□ -0.67
NPIPB3-207ENST00000535190 CD2APQ9Y5K6 639 aa10.88□□□□□ -0.67
NPIPB3-207ENST00000535190 YBX3P16989 372 aaKnown RBP eCLIP10.87□□□□□ -0.67
NPIPB3-207ENST00000535190 NFATC2IPQ8NCF5 419 aa10.87□□□□□ -0.67
NPIPB3-207ENST00000535190 LGR6Q9HBX8 967 aa10.87□□□□□ -0.67
NPIPB3-207ENST00000535190 CABP4P57796 275 aa10.86□□□□□ -0.67
NPIPB3-207ENST00000535190 GPR162Q16538 588 aa10.86□□□□□ -0.67
NPIPB3-207ENST00000535190 CC2D1BQ5T0F9 858 aaKnown RBP10.86□□□□□ -0.67
NPIPB3-207ENST00000535190 SCN11AQ9UI33 1791 aa10.85□□□□□ -0.67
NPIPB3-207ENST00000535190 GNPATO15228 680 aa10.85□□□□□ -0.67
NPIPB3-207ENST00000535190 RPS6KA4O75676 772 aa10.85□□□□□ -0.67
NPIPB3-207ENST00000535190 PHF14O94880 888 aa10.85□□□□□ -0.67
NPIPB3-207ENST00000535190 HOXD11P31277 338 aaPredicted RBP10.85□□□□□ -0.67
NPIPB3-207ENST00000535190 AKAP4Q5JQC9 854 aa10.85□□□□□ -0.67
NPIPB3-207ENST00000535190 KLHL34Q8N239 644 aa10.85□□□□□ -0.67
NPIPB3-207ENST00000535190 ARHGEF1Q92888 912 aaKnown RBP10.85□□□□□ -0.67
NPIPB3-207ENST00000535190 CNTNAP4Q9C0A0 1308 aa10.84□□□□□ -0.67
NPIPB3-207ENST00000535190 COL5A3P25940 1745 aaPredicted RBP10.84□□□□□ -0.67
NPIPB3-207ENST00000535190 RNMTO43148 476 aaKnown RBP10.84□□□□□ -0.67
NPIPB3-207ENST00000535190 DIAPH1O60610 1272 aaKnown RBP10.84□□□□□ -0.67
NPIPB3-207ENST00000535190 HMOX1P09601 288 aa10.84□□□□□ -0.67
NPIPB3-207ENST00000535190 KCNA4P22459 653 aa10.84□□□□□ -0.67
NPIPB3-207ENST00000535190 MTHFSDQ2M296 383 aaKnown RBP10.84□□□□□ -0.67
NPIPB3-207ENST00000535190 C1orf141Q5JVX7 400 aa10.84□□□□□ -0.67
NPIPB3-207ENST00000535190 RBM42Q9BTD8 480 aaKnown RBP10.84□□□□□ -0.67
NPIPB3-207ENST00000535190 COL3A1P02461 1466 aaPredicted RBP10.84□□□□□ -0.67
NPIPB3-207ENST00000535190 TRAPPC3LQ5T215 181 aa10.83□□□□□ -0.68
NPIPB3-207ENST00000535190 SLC52A2Q9HAB3 445 aa10.83□□□□□ -0.68
NPIPB3-207ENST00000535190 RTCBQ9Y3I0 505 aaKnown RBP10.83□□□□□ -0.68
NPIPB3-207ENST00000535190 ADAMTS7Q9UKP4 1686 aa10.82□□□□□ -0.68
NPIPB3-207ENST00000535190 GRIN3BO60391 1043 aa10.82□□□□□ -0.68
NPIPB3-207ENST00000535190 PTCD1O75127 700 aaKnown RBP10.82□□□□□ -0.68
NPIPB3-207ENST00000535190 GYS1P13807 737 aa10.82□□□□□ -0.68
NPIPB3-207ENST00000535190 NCBP3Q53F19 620 aaKnown RBP10.82□□□□□ -0.68
NPIPB3-207ENST00000535190 INTS5Q6P9B9 1019 aaKnown RBP10.82□□□□□ -0.68
NPIPB3-207ENST00000535190 CICQ96RK0 1608 aaPredicted RBP10.81□□□□□ -0.68
NPIPB3-207ENST00000535190 MMP10P09238 476 aa10.81□□□□□ -0.68
NPIPB3-207ENST00000535190 CRKLP46109 303 aaKnown RBP10.81□□□□□ -0.68
NPIPB3-207ENST00000535190 NLGN1Q8N2Q7 840 aa10.81□□□□□ -0.68
NPIPB3-207ENST00000535190 VIRMAQ69YN4 1812 aaKnown RBP10.81□□□□□ -0.68
NPIPB3-207ENST00000535190 TJP1Q07157 1748 aa10.81□□□□□ -0.68
NPIPB3-207ENST00000535190 MRC1P22897 1456 aa10.81□□□□□ -0.68
NPIPB3-207ENST00000535190 GOLGB1Q14789 3259 aaKnown RBP10.8□□□□□ -0.68
NPIPB3-207ENST00000535190 KIF13BQ9NQT8 1826 aa10.8□□□□□ -0.68
NPIPB3-207ENST00000535190 ZNF316A6NFI3 1004 aaPredicted RBP10.8□□□□□ -0.68
NPIPB3-207ENST00000535190 SLC39A6Q13433 755 aa10.8□□□□□ -0.68
NPIPB3-207ENST00000535190 DNAJC10Q8IXB1 793 aa10.8□□□□□ -0.68
NPIPB3-207ENST00000535190 IL17REQ8NFR9 667 aa10.8□□□□□ -0.68
NPIPB3-207ENST00000535190 RNF216Q9NWF9 866 aaPredicted RBP10.8□□□□□ -0.68
NPIPB3-207ENST00000535190 KIAA1551Q9HCM1 1747 aa10.79□□□□□ -0.68
NPIPB3-207ENST00000535190 NPM3O75607 178 aaKnown RBP10.79□□□□□ -0.68
NPIPB3-207ENST00000535190 CYP19A1P11511 503 aaPredicted RBP10.79□□□□□ -0.68
NPIPB3-207ENST00000535190 PELP1Q8IZL8 1130 aaKnown RBP10.79□□□□□ -0.68
NPIPB3-207ENST00000535190 KCNA3P22001 575 aa10.78□□□□□ -0.68
NPIPB3-207ENST00000535190 TM4SF1P30408 202 aa10.78□□□□□ -0.68
NPIPB3-207ENST00000535190 FKBP8Q14318 412 aa10.78□□□□□ -0.68
NPIPB3-207ENST00000535190 PHACTR3Q96KR7 559 aa10.78□□□□□ -0.68
NPIPB3-207ENST00000535190 SRP68Q9UHB9 627 aaKnown RBP10.78□□□□□ -0.68
NPIPB3-207ENST00000535190 KCPQ6ZWJ8 1503 aa10.78□□□□□ -0.68
NPIPB3-207ENST00000535190 PPP2R1AP30153 589 aa10.77□□□□□ -0.69
NPIPB3-207ENST00000535190 RFC4P35249 363 aa10.77□□□□□ -0.69
NPIPB3-207ENST00000535190 TGFB2P61812 414 aa10.77□□□□□ -0.69
NPIPB3-207ENST00000535190 CNGB1Q14028 1251 aaPredicted RBP10.77□□□□□ -0.69
NPIPB3-207ENST00000535190 VSIG10Q8N0Z9 540 aa10.77□□□□□ -0.69
NPIPB3-207ENST00000535190 RSPH6AQ9H0K4 717 aa10.77□□□□□ -0.69
NPIPB3-207ENST00000535190 C4AP0C0L4 1744 aa10.77□□□□□ -0.69
NPIPB3-207ENST00000535190 SOS1Q07889 1333 aaPredicted RBP10.77□□□□□ -0.69
NPIPB3-207ENST00000535190 USP42Q9H9J4 1324 aaKnown RBP10.77□□□□□ -0.69
NPIPB3-207ENST00000535190 PXDNLA1KZ92 1463 aa10.76□□□□□ -0.69
NPIPB3-207ENST00000535190 DDR1Q08345 913 aa10.76□□□□□ -0.69
NPIPB3-207ENST00000535190 CCDC87Q9NVE4 849 aa10.76□□□□□ -0.69
NPIPB3-207ENST00000535190 C10orf71Q711Q0 1435 aa10.75□□□□□ -0.69
NPIPB3-207ENST00000535190 A0A0G2JLW4 131 aa10.75□□□□□ -0.69
NPIPB3-207ENST00000535190 U2SURPO15042 1029 aaKnown RBP10.75□□□□□ -0.69
NPIPB3-207ENST00000535190 C1QTNF8P60827 252 aa10.75□□□□□ -0.69
NPIPB3-207ENST00000535190 BCL2L12Q9HB09 334 aa10.75□□□□□ -0.69
NPIPB3-207ENST00000535190 WWC3Q9ULE0 1092 aa10.75□□□□□ -0.69
NPIPB3-207ENST00000535190 ADCY9O60503 1353 aa10.75□□□□□ -0.69
NPIPB3-207ENST00000535190 CEMIPQ8WUJ3 1361 aa10.75□□□□□ -0.69
NPIPB3-207ENST00000535190 SIPA1L3O60292 1781 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms