RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-233ENST00000534636 LINC00116Q8NCU8 138 aa25.16■■□□□ 1.62
CTSB-233ENST00000534636 C1orf141Q5JVX7 400 aa25.15■■□□□ 1.62
CTSB-233ENST00000534636 KIF7Q2M1P5 1343 aa25.14■■□□□ 1.62
CTSB-233ENST00000534636 GNPATO15228 680 aa25.14■■□□□ 1.62
CTSB-233ENST00000534636 ATG3Q9NT62 314 aa25.14■■□□□ 1.62
CTSB-233ENST00000534636 CD2APQ9Y5K6 639 aa25.13■■□□□ 1.61
CTSB-233ENST00000534636 GRIN3BO60391 1043 aa25.12■■□□□ 1.61
CTSB-233ENST00000534636 ITPK1Q13572 414 aa25.12■■□□□ 1.61
CTSB-233ENST00000534636 ZNF831Q5JPB2 1677 aa25.12■■□□□ 1.61
CTSB-233ENST00000534636 KDRP35968 1356 aa25.11■■□□□ 1.61
CTSB-233ENST00000534636 CABP4P57796 275 aa25.11■■□□□ 1.61
CTSB-233ENST00000534636 AMER1Q5JTC6 1135 aaPredicted RBP25.11■■□□□ 1.61
CTSB-233ENST00000534636 SULT6B1Q6IMI4 303 aa25.11■■□□□ 1.61
CTSB-233ENST00000534636 AMIGO3Q86WK7 504 aa25.11■■□□□ 1.61
CTSB-233ENST00000534636 AEBP1Q8IUX7 1158 aa25.11■■□□□ 1.61
CTSB-233ENST00000534636 KDM6AO15550 1401 aaPredicted RBP25.11■■□□□ 1.61
CTSB-233ENST00000534636 MTHFSP49914 203 aa25.1■■□□□ 1.61
CTSB-233ENST00000534636 RBM42Q9BTD8 480 aaKnown RBP25.1■■□□□ 1.61
CTSB-233ENST00000534636 COL5A3P25940 1745 aaPredicted RBP25.09■■□□□ 1.61
CTSB-233ENST00000534636 SMIM5Q71RC9 77 aa25.08■■□□□ 1.61
CTSB-233ENST00000534636 IL13P35225 146 aa25.07■■□□□ 1.6
CTSB-233ENST00000534636 RTCBQ9Y3I0 505 aaKnown RBP25.07■■□□□ 1.6
CTSB-233ENST00000534636 SCN11AQ9UI33 1791 aa25.06■■□□□ 1.6
CTSB-233ENST00000534636 YBX3P16989 372 aaKnown RBP eCLIP25.06■■□□□ 1.6
CTSB-233ENST00000534636 TRAPPC3LQ5T215 181 aa25.04■■□□□ 1.6
CTSB-233ENST00000534636 CNTNAP4Q9C0A0 1308 aa25.03■■□□□ 1.6
CTSB-233ENST00000534636 ADRA2BP18089 450 aa25.02■■□□□ 1.6
CTSB-233ENST00000534636 CC2D1BQ5T0F9 858 aaKnown RBP25.02■■□□□ 1.6
CTSB-233ENST00000534636 VIRMAQ69YN4 1812 aaKnown RBP25.01■■□□□ 1.59
CTSB-233ENST00000534636 RC3H1Q5TC82 1133 aaKnown RBP25.01■■□□□ 1.59
CTSB-233ENST00000534636 SLC4A9Q96Q91 983 aa25.01■■□□□ 1.59
CTSB-233ENST00000534636 AKAP4Q5JQC9 854 aa25■■□□□ 1.59
CTSB-233ENST00000534636 NFATC2IPQ8NCF5 419 aa25■■□□□ 1.59
CTSB-233ENST00000534636 PTCD1O75127 700 aaKnown RBP24.99■■□□□ 1.59
CTSB-233ENST00000534636 MMP10P09238 476 aa24.99■■□□□ 1.59
CTSB-233ENST00000534636 MYH14Q7Z406 1995 aaKnown RBP24.99■■□□□ 1.59
CTSB-233ENST00000534636 DIAPH1O60610 1272 aaKnown RBP24.98■■□□□ 1.59
CTSB-233ENST00000534636 HMOX1P09601 288 aa24.98■■□□□ 1.59
CTSB-233ENST00000534636 RFC4P35249 363 aa24.98■■□□□ 1.59
CTSB-233ENST00000534636 C4AP0C0L4 1744 aa24.98■■□□□ 1.59
CTSB-233ENST00000534636 PER1O15534 1290 aaPredicted RBP24.97■■□□□ 1.59
CTSB-233ENST00000534636 NLGN1Q8N2Q7 840 aa24.97■■□□□ 1.59
CTSB-233ENST00000534636 CICQ96RK0 1608 aaPredicted RBP24.97■■□□□ 1.59
CTSB-233ENST00000534636 RPS6KA4O75676 772 aa24.96■■□□□ 1.59
CTSB-233ENST00000534636 TJP1Q07157 1748 aa24.95■■□□□ 1.59
CTSB-233ENST00000534636 GIGYF1O75420 1035 aaPredicted RBP24.95■■□□□ 1.58
CTSB-233ENST00000534636 ARHGEF1Q92888 912 aaKnown RBP24.95■■□□□ 1.58
CTSB-233ENST00000534636 KIF13BQ9NQT8 1826 aa24.95■■□□□ 1.58
CTSB-233ENST00000534636 NPC1L1Q9UHC9 1359 aa24.94■■□□□ 1.58
CTSB-233ENST00000534636 SLC52A2Q9HAB3 445 aa24.94■■□□□ 1.58
CTSB-233ENST00000534636 MRC1P22897 1456 aa24.94■■□□□ 1.58
CTSB-233ENST00000534636 CRKLP46109 303 aaKnown RBP24.93■■□□□ 1.58
CTSB-233ENST00000534636 CNGB1Q14028 1251 aaPredicted RBP24.93■■□□□ 1.58
CTSB-233ENST00000534636 WWC3Q9ULE0 1092 aa24.92■■□□□ 1.58
CTSB-233ENST00000534636 C1QTNF8P60827 252 aa24.91■■□□□ 1.58
CTSB-233ENST00000534636 PARP3Q9Y6F1 533 aa24.91■■□□□ 1.58
CTSB-233ENST00000534636 RNMTO43148 476 aaKnown RBP24.9■■□□□ 1.58
CTSB-233ENST00000534636 GYS1P13807 737 aa24.9■■□□□ 1.58
CTSB-233ENST00000534636 CCDC87Q9NVE4 849 aa24.9■■□□□ 1.58
CTSB-233ENST00000534636 N4BP2Q86UW6 1770 aaPredicted RBP24.9■■□□□ 1.58
CTSB-233ENST00000534636 C10orf71Q711Q0 1435 aa24.89■■□□□ 1.58
CTSB-233ENST00000534636 LGR6Q9HBX8 967 aa24.89■■□□□ 1.58
CTSB-233ENST00000534636 ATP10DQ9P241 1426 aa24.88■■□□□ 1.57
CTSB-233ENST00000534636 U2SURPO15042 1029 aaKnown RBP24.88■■□□□ 1.57
CTSB-233ENST00000534636 MTHFSDQ2M296 383 aaKnown RBP24.88■■□□□ 1.57
CTSB-233ENST00000534636 PXDNLA1KZ92 1463 aa24.88■■□□□ 1.57
CTSB-233ENST00000534636 COL3A1P02461 1466 aaPredicted RBP24.88■■□□□ 1.57
CTSB-233ENST00000534636 ADAMTS7Q9UKP4 1686 aa24.88■■□□□ 1.57
CTSB-233ENST00000534636 TGFB2P61812 414 aa24.87■■□□□ 1.57
CTSB-233ENST00000534636 SENP3-EIF4A1A0A087X0R7 540 aa24.86■■□□□ 1.57
CTSB-233ENST00000534636 KIAA1551Q9HCM1 1747 aa24.86■■□□□ 1.57
CTSB-233ENST00000534636 USP42Q9H9J4 1324 aaKnown RBP24.85■■□□□ 1.57
CTSB-233ENST00000534636 DNAJC10Q8IXB1 793 aa24.84■■□□□ 1.57
CTSB-233ENST00000534636 KCPQ6ZWJ8 1503 aa24.83■■□□□ 1.57
CTSB-233ENST00000534636 SLC39A6Q13433 755 aa24.83■■□□□ 1.57
CTSB-233ENST00000534636 CFAP53Q96M91 514 aa24.83■■□□□ 1.57
CTSB-233ENST00000534636 GPBP1L1Q9HC44 474 aaPredicted RBP24.83■■□□□ 1.57
CTSB-233ENST00000534636 ADCY9O60503 1353 aa24.82■■□□□ 1.56
CTSB-233ENST00000534636 ZPR1O75312 459 aa24.82■■□□□ 1.56
CTSB-233ENST00000534636 TTC5Q8N0Z6 440 aa24.82■■□□□ 1.56
CTSB-233ENST00000534636 GAS2L2Q8NHY3 880 aa24.82■■□□□ 1.56
CTSB-233ENST00000534636 SRP68Q9UHB9 627 aaKnown RBP24.82■■□□□ 1.56
CTSB-233ENST00000534636 BCS1LQ9Y276 419 aa24.82■■□□□ 1.56
CTSB-233ENST00000534636 UBR2Q8IWV8 1755 aa24.82■■□□□ 1.56
CTSB-233ENST00000534636 INTS5Q6P9B9 1019 aaKnown RBP24.81■■□□□ 1.56
CTSB-233ENST00000534636 BRCA1P38398 1863 aaKnown RBP24.81■■□□□ 1.56
CTSB-233ENST00000534636 A0A0G2JLW4 131 aa24.8■■□□□ 1.56
CTSB-233ENST00000534636 TEFQ10587 303 aa24.79■■□□□ 1.56
CTSB-233ENST00000534636 FKBP8Q14318 412 aa24.79■■□□□ 1.56
CTSB-233ENST00000534636 VSIG10Q8N0Z9 540 aa24.79■■□□□ 1.56
CTSB-233ENST00000534636 SOS1Q07889 1333 aaPredicted RBP24.79■■□□□ 1.56
CTSB-233ENST00000534636 GNAT3A8MTJ3 354 aa24.78■■□□□ 1.56
CTSB-233ENST00000534636 CYP19A1P11511 503 aaPredicted RBP24.78■■□□□ 1.56
CTSB-233ENST00000534636 COL15A1P39059 1388 aa24.78■■□□□ 1.56
CTSB-233ENST00000534636 DPEP1P16444 411 aa24.77■■□□□ 1.56
CTSB-233ENST00000534636 ZNF526Q8TF50 670 aaPredicted RBP24.77■■□□□ 1.56
CTSB-233ENST00000534636 FCHSD2O94868 740 aa24.76■■□□□ 1.55
CTSB-233ENST00000534636 NUDCQ9Y266 331 aa24.76■■□□□ 1.55
CTSB-233ENST00000534636 ARFGEF1Q9Y6D6 1849 aa24.76■■□□□ 1.55
CTSB-233ENST00000534636 SIPA1L3O60292 1781 aaPredicted RBP24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms